FFCP PHASE1:Hg19::chr5:106837869..106837878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:106837869..106837878,- | |||
|coexpression_cluster_id=C3346 | |coexpression_cluster_id=C3346 | ||
|description=CAGE_peak_at_chr5:106837869..106837878,- | |description=CAGE_peak_at_chr5:106837869..106837878,- | ||
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|ontology_enrichment_celltype=CL:0002139!1.89e-32!24;CL:0000115!6.36e-26!35;CL:0000071!3.15e-23!18;CL:0002546!3.15e-23!18;CL:0002144!1.20e-21!3;CL:0002078!3.69e-20!44;CL:0000213!4.80e-15!57;CL:0000215!4.80e-15!57;CL:0002545!7.40e-15!2;CL:0005020!7.64e-11!6;CL:0002138!7.64e-11!6;CL:0005022!7.64e-11!6;CL:0002618!6.57e-10!3;CL:0000167!2.04e-08!1;CL:0000164!2.04e-08!1;CL:0000502!2.04e-08!1;CL:0000172!2.04e-08!1;CL:0000173!2.04e-08!1;CL:0002351!2.04e-08!1;CL:0000810!3.34e-08!1;CL:0000895!3.34e-08!1;CL:0002436!3.34e-08!1;CL:0002427!3.34e-08!1;CL:0002428!3.34e-08!1;CL:0002429!3.34e-08!1;CL:0002433!3.34e-08!1;CL:0002431!3.34e-08!1;CL:0002432!3.34e-08!1;CL:1000413!2.27e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.89e-32!24;CL:0000115!6.36e-26!35;CL:0000071!3.15e-23!18;CL:0002546!3.15e-23!18;CL:0002144!1.20e-21!3;CL:0002078!3.69e-20!44;CL:0000213!4.80e-15!57;CL:0000215!4.80e-15!57;CL:0002545!7.40e-15!2;CL:0005020!7.64e-11!6;CL:0002138!7.64e-11!6;CL:0005022!7.64e-11!6;CL:0002618!6.57e-10!3;CL:0000167!2.04e-08!1;CL:0000164!2.04e-08!1;CL:0000502!2.04e-08!1;CL:0000172!2.04e-08!1;CL:0000173!2.04e-08!1;CL:0002351!2.04e-08!1;CL:0000810!3.34e-08!1;CL:0000895!3.34e-08!1;CL:0002436!3.34e-08!1;CL:0002427!3.34e-08!1;CL:0002428!3.34e-08!1;CL:0002429!3.34e-08!1;CL:0002433!3.34e-08!1;CL:0002431!3.34e-08!1;CL:0002432!3.34e-08!1;CL:1000413!2.27e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.99e-50;1!CL:0000164;3.99e-50;1!CL:0000502;3.99e-50;1!CL:0000172;3.99e-50;1!CL:0000173;3.99e-50;1!CL:0002144;6.76e-18;3!CL:0002188;3.26e-11;5!CL:0002078;4.63e-10;45!CL:0002138;1.44e-09;6!CL:0002139;2.45e-09;24!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000115;2.66e-08;36!CL:0000213;3.80e-08;58!CL:0000215;3.80e-08;58!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9 | |ontology_enrichment_celltype_v019=CL:0000167;3.99e-50;1!CL:0000164;3.99e-50;1!CL:0000502;3.99e-50;1!CL:0000172;3.99e-50;1!CL:0000173;3.99e-50;1!CL:0002144;6.76e-18;3!CL:0002188;3.26e-11;5!CL:0002078;4.63e-10;45!CL:0002138;1.44e-09;6!CL:0002139;2.45e-09;24!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:0000115;2.66e-08;36!CL:0000213;3.80e-08;58!CL:0000215;3.80e-08;58!CL:0000150;8.37e-07;9!CL:0000163;8.37e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.58e-50,1;CL:0000164,6.58e-50,1;CL:0000502,6.58e-50,1;CL:0000172,6.58e-50,1;CL:0000173,6.58e-50,1;CL:0002351,6.58e-50,1;CL:0002144,6.76e-18,3;CL:0000115,2.66e-13,36;CL:0002188,3.26e-11,5;CL:0002078,7.94e-11,45;CL:0005020,1.32e-09,6;CL:0002138,1.32e-09,6;CL:0005022,1.32e-09,6;CL:0002139,2.35e-09,24;CL:0000213,1.35e-08,58;CL:0000215,1.35e-08,58;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7;CL:0000150,8.85e-07,9;CL:0000163,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002351;3.99e-50;1!CL:0005022;1.44e-09;6 | |ontology_enrichment_development_v019=CL:0002351;3.99e-50;1!CL:0005022;1.44e-09;6 | ||
|ontology_enrichment_disease=DOID:4430!2.04e-08!1;DOID:5662!6.19e-08!1 | |ontology_enrichment_disease=DOID:4430!2.04e-08!1;DOID:5662!6.19e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;3.99e-50;1!DOID:169;1.44e-09;6 | |ontology_enrichment_disease_v019=DOID:4430;3.99e-50;1!DOID:169;1.44e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,6.58e-50,1;DOID:169,1.57e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0010523;6.76e-18;3!UBERON:0001915;6.76e-18;3!UBERON:0001982;6.76e-18;3!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0001473;1.69e-07;8!UBERON:0004536;1.69e-07;8!UBERON:0006558;1.69e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0010523;6.76e-18;3!UBERON:0001915;6.76e-18;3!UBERON:0001982;6.76e-18;3!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0001473;1.69e-07;8!UBERON:0004536;1.69e-07;8!UBERON:0006558;1.69e-07;8 | ||
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|short_description=p@chr5:106837869..106837878,- | |short_description=p@chr5:106837869..106837878,- | ||
}} | }} |
Latest revision as of 08:30, 30 July 2015
Short description: | p@chr5:106837869..106837878, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:106837869..106837878, - |
Coexpression cluster: | C3346_Endothelial_Renal_somatostatinoma_Lymphatic_Small_Fibroblast_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.58e-50 | 1 |
enteroendocrine cell | 6.58e-50 | 1 |
type D enteroendocrine cell | 6.58e-50 | 1 |
somatostatin secreting cell | 6.58e-50 | 1 |
pancreatic D cell | 6.58e-50 | 1 |
progenitor cell of endocrine pancreas | 6.58e-50 | 1 |
capillary endothelial cell | 6.76e-18 | 3 |
endothelial cell | 2.66e-13 | 36 |
glomerular endothelial cell | 3.26e-11 | 5 |
meso-epithelial cell | 7.94e-11 | 45 |
lymphangioblast | 1.32e-09 | 6 |
endothelial cell of lymphatic vessel | 1.32e-09 | 6 |
vascular lymphangioblast | 1.32e-09 | 6 |
endothelial cell of vascular tree | 2.35e-09 | 24 |
lining cell | 1.35e-08 | 58 |
barrier cell | 1.35e-08 | 58 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
glandular epithelial cell | 8.85e-07 | 9 |
endocrine cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 6.76e-18 | 3 |
endothelium of capillary | 6.76e-18 | 3 |
capillary | 6.76e-18 | 3 |
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
lymphatic vessel | 1.59e-07 | 8 |
lymph vasculature | 1.59e-07 | 8 |
lymphatic part of lymphoid system | 1.59e-07 | 8 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.58e-50 | 1 |
neuroendocrine tumor | 1.57e-09 | 6 |