FFCP PHASE1:Hg19::chr15:90347724..90347746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90347724..90347746,+ | |||
|coexpression_cluster_id=C1415 | |coexpression_cluster_id=C1415 | ||
|description=CAGE_peak_at_chr15:90347724..90347746,+ | |description=CAGE_peak_at_chr15:90347724..90347746,+ | ||
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|ontology_enrichment_celltype=CL:0000048!9.40e-20!430;CL:0000723!1.19e-18!436;CL:0000034!3.06e-17!444;CL:0000055!1.06e-16!180;CL:0000057!2.07e-15!75;CL:0002371!1.53e-14!591;CL:0002320!1.09e-12!365;CL:0000134!7.07e-11!358;CL:0000144!1.09e-10!625;CL:0002620!6.18e-10!23;CL:0000680!8.00e-10!57;CL:0000056!8.00e-10!57;CL:0000355!8.00e-10!57;CL:0000219!3.55e-09!390;CL:0000183!1.07e-08!59;CL:0002194!1.26e-08!63;CL:0000576!1.26e-08!63;CL:0000040!1.26e-08!63;CL:0000559!1.26e-08!63;CL:0000187!3.53e-08!54;CL:0002009!5.31e-08!65;CL:0000766!2.41e-07!76;CL:0000839!5.09e-07!70;CL:0000557!9.13e-07!71 | |ontology_enrichment_celltype=CL:0000048!9.40e-20!430;CL:0000723!1.19e-18!436;CL:0000034!3.06e-17!444;CL:0000055!1.06e-16!180;CL:0000057!2.07e-15!75;CL:0002371!1.53e-14!591;CL:0002320!1.09e-12!365;CL:0000134!7.07e-11!358;CL:0000144!1.09e-10!625;CL:0002620!6.18e-10!23;CL:0000680!8.00e-10!57;CL:0000056!8.00e-10!57;CL:0000355!8.00e-10!57;CL:0000219!3.55e-09!390;CL:0000183!1.07e-08!59;CL:0002194!1.26e-08!63;CL:0000576!1.26e-08!63;CL:0000040!1.26e-08!63;CL:0000559!1.26e-08!63;CL:0000187!3.53e-08!54;CL:0002009!5.31e-08!65;CL:0000766!2.41e-07!76;CL:0000839!5.09e-07!70;CL:0000557!9.13e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000680;3.27e-11;7!CL:0002582;1.63e-08;3!CL:0002559;2.66e-08;5!CL:0000188;3.01e-08;9!CL:0002620;5.37e-08;23!CL:0000515;1.66e-07;3!CL:0002570;2.08e-07;8!CL:0000594;2.33e-07;3!CL:0002334;5.00e-07;12!CL:0002551;9.02e-07;6 | |ontology_enrichment_celltype_v019=CL:0000680;3.27e-11;7!CL:0002582;1.63e-08;3!CL:0002559;2.66e-08;5!CL:0000188;3.01e-08;9!CL:0002620;5.37e-08;23!CL:0000515;1.66e-07;3!CL:0002570;2.08e-07;8!CL:0000594;2.33e-07;3!CL:0002334;5.00e-07;12!CL:0002551;9.02e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.93e-11,76;CL:0000048,1.91e-10,427;CL:0000723,4.57e-10,433;CL:0000034,1.40e-09,441;CL:0002559,1.89e-08,5;CL:0002582,1.98e-08,3;CL:0000188,2.63e-08,9;CL:0002620,5.57e-08,23;CL:0000594,2.03e-07,3;CL:0002570,3.51e-07,8;CL:0002334,5.21e-07,12;CL:0000680,5.62e-07,58;CL:0000056,5.62e-07,58;CL:0000355,5.62e-07,58;CL:0002551,7.64e-07,6;CL:0002320,8.86e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.34e-16!167;UBERON:0000914!3.73e-13!83;UBERON:0002329!3.73e-13!83;UBERON:0003077!3.73e-13!83;UBERON:0003059!3.73e-13!83;UBERON:0007282!3.73e-13!83;UBERON:0009618!3.73e-13!83;UBERON:0007285!3.73e-13!83;UBERON:0004290!8.67e-13!70;UBERON:0002384!2.54e-12!375;UBERON:0000926!3.90e-12!448;UBERON:0004120!3.90e-12!448;UBERON:0006603!3.90e-12!448;UBERON:0000486!4.05e-10!82;UBERON:0005256!2.12e-09!143;UBERON:0002385!4.25e-09!63;UBERON:0001015!4.25e-09!63;UBERON:0000383!4.25e-09!63;UBERON:0001134!7.35e-09!61;UBERON:0002036!7.35e-09!61;UBERON:0003082!7.35e-09!61;UBERON:0001013!2.24e-08!14;UBERON:0003081!7.72e-08!216;UBERON:0002199!1.16e-07!45;UBERON:0002416!1.16e-07!45;UBERON:0002193!2.50e-07!112;UBERON:0002405!4.29e-07!115;UBERON:0004765!6.22e-07!101;UBERON:0001434!6.22e-07!101;UBERON:0002371!7.06e-07!80 | |ontology_enrichment_uberon=UBERON:0002204!1.34e-16!167;UBERON:0000914!3.73e-13!83;UBERON:0002329!3.73e-13!83;UBERON:0003077!3.73e-13!83;UBERON:0003059!3.73e-13!83;UBERON:0007282!3.73e-13!83;UBERON:0009618!3.73e-13!83;UBERON:0007285!3.73e-13!83;UBERON:0004290!8.67e-13!70;UBERON:0002384!2.54e-12!375;UBERON:0000926!3.90e-12!448;UBERON:0004120!3.90e-12!448;UBERON:0006603!3.90e-12!448;UBERON:0000486!4.05e-10!82;UBERON:0005256!2.12e-09!143;UBERON:0002385!4.25e-09!63;UBERON:0001015!4.25e-09!63;UBERON:0000383!4.25e-09!63;UBERON:0001134!7.35e-09!61;UBERON:0002036!7.35e-09!61;UBERON:0003082!7.35e-09!61;UBERON:0001013!2.24e-08!14;UBERON:0003081!7.72e-08!216;UBERON:0002199!1.16e-07!45;UBERON:0002416!1.16e-07!45;UBERON:0002193!2.50e-07!112;UBERON:0002405!4.29e-07!115;UBERON:0004765!6.22e-07!101;UBERON:0001434!6.22e-07!101;UBERON:0002371!7.06e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.19e-09;16!UBERON:0002036;1.19e-09;16!UBERON:0001013;1.36e-09;14!UBERON:0002067;2.58e-09;9!UBERON:0002385;3.73e-09;31!UBERON:0001015;3.73e-09;31!UBERON:0000383;3.73e-09;31!UBERON:0002072;2.63e-08;5!UBERON:0002073;2.66e-08;5!UBERON:0002199;1.05e-07;46!UBERON:0002416;1.05e-07;46!UBERON:0003102;2.86e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.19e-09;16!UBERON:0002036;1.19e-09;16!UBERON:0001013;1.36e-09;14!UBERON:0002067;2.58e-09;9!UBERON:0002385;3.73e-09;31!UBERON:0001015;3.73e-09;31!UBERON:0000383;3.73e-09;31!UBERON:0002072;2.63e-08;5!UBERON:0002073;2.66e-08;5!UBERON:0002199;1.05e-07;46!UBERON:0002416;1.05e-07;46!UBERON:0003102;2.86e-07;50 | ||
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| ||
|short_description=p@chr15:90347724..90347746,+ | |short_description=p@chr15:90347724..90347746,+ | ||
}} | }} |
Latest revision as of 05:22, 25 July 2015
Short description: | p@chr15:90347724..90347746, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90347724..90347746, + |
Coexpression cluster: | C1415_small_Hair_Mesenchymal_Preadipocyte_Fibroblast_duodenum_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.93e-11 | 76 |
multi fate stem cell | 1.91e-10 | 427 |
somatic stem cell | 4.57e-10 | 433 |
stem cell | 1.40e-09 | 441 |
hair follicle cell | 1.89e-08 | 5 |
visceral preadipocyte | 1.98e-08 | 3 |
cell of skeletal muscle | 2.63e-08 | 9 |
skin fibroblast | 5.57e-08 | 23 |
skeletal muscle satellite cell | 2.03e-07 | 3 |
mesenchymal stem cell of adipose | 3.51e-07 | 8 |
preadipocyte | 5.21e-07 | 12 |
muscle precursor cell | 5.62e-07 | 58 |
myoblast | 5.62e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.62e-07 | 58 |
fibroblast of dermis | 7.64e-07 | 6 |
connective tissue cell | 8.86e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
integument | 3.56e-12 | 46 |
integumental system | 3.56e-12 | 46 |
somite | 5.55e-11 | 71 |
presomitic mesoderm | 5.55e-11 | 71 |
presumptive segmental plate | 5.55e-11 | 71 |
dermomyotome | 5.55e-11 | 71 |
trunk paraxial mesoderm | 5.55e-11 | 71 |
paraxial mesoderm | 9.52e-11 | 72 |
presumptive paraxial mesoderm | 9.52e-11 | 72 |
dense mesenchyme tissue | 1.61e-10 | 73 |
epithelial vesicle | 1.95e-10 | 78 |
adipose tissue | 1.52e-09 | 14 |
dermis | 1.75e-09 | 9 |
dermatome | 1.75e-09 | 9 |
future dermis | 1.75e-09 | 9 |
multilaminar epithelium | 1.85e-09 | 83 |
musculoskeletal system | 1.65e-08 | 167 |
hair follicle | 1.89e-08 | 5 |
hair follicle placode | 1.89e-08 | 5 |
hypodermis | 2.04e-08 | 5 |
skin of body | 6.36e-08 | 41 |
mesoderm | 1.03e-07 | 315 |
mesoderm-derived structure | 1.03e-07 | 315 |
presumptive mesoderm | 1.03e-07 | 315 |
muscle tissue | 5.78e-07 | 64 |
musculature | 5.78e-07 | 64 |
musculature of body | 5.78e-07 | 64 |