FFCP PHASE1:Hg19::chr21:37802582..37802591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000429588_5end | |association_with_transcript=-66bp_to_ENST00000429588_5end | ||
|cluster_id=chr21:37802582..37802591,+ | |||
|description=CAGE_peak_3_at_ENST00000429588_5end | |description=CAGE_peak_3_at_ENST00000429588_5end | ||
|id=chr21:37802582..37802591,+ | |id=chr21:37802582..37802591,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.21e-19!24;CL:0000071!1.18e-15!18;CL:0002546!1.18e-15!18;CL:0002057!4.59e-13!42;CL:0000213!1.10e-12!57;CL:0000215!1.10e-12!57;CL:0000115!2.30e-12!35;CL:0000557!4.60e-12!71;CL:0000860!6.64e-12!45;CL:0002009!4.16e-11!65;CL:0000839!6.48e-11!70;CL:0000766!6.71e-11!76;CL:0002194!2.35e-10!63;CL:0000576!2.35e-10!63;CL:0000040!2.35e-10!63;CL:0000559!2.35e-10!63;CL:1000413!5.76e-09!9;CL:0000222!1.45e-08!119;CL:0002078!1.83e-08!44;CL:0000076!4.81e-08!62;CL:0000548!9.24e-07!679;CL:0000004!9.24e-07!679;CL:0000255!9.24e-07!679 | |ontology_enrichment_celltype=CL:0002139!1.21e-19!24;CL:0000071!1.18e-15!18;CL:0002546!1.18e-15!18;CL:0002057!4.59e-13!42;CL:0000213!1.10e-12!57;CL:0000215!1.10e-12!57;CL:0000115!2.30e-12!35;CL:0000557!4.60e-12!71;CL:0000860!6.64e-12!45;CL:0002009!4.16e-11!65;CL:0000839!6.48e-11!70;CL:0000766!6.71e-11!76;CL:0002194!2.35e-10!63;CL:0000576!2.35e-10!63;CL:0000040!2.35e-10!63;CL:0000559!2.35e-10!63;CL:1000413!5.76e-09!9;CL:0000222!1.45e-08!119;CL:0002078!1.83e-08!44;CL:0000076!4.81e-08!62;CL:0000548!9.24e-07!679;CL:0000004!9.24e-07!679;CL:0000255!9.24e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.92e-37;24!CL:0000071;5.74e-33;18!CL:0000860;2.25e-30;33!CL:0002057;2.25e-30;33!CL:0000115;3.90e-22;36!CL:0000473;3.63e-21;39!CL:0000234;3.63e-21;39!CL:1000413;6.76e-18;9!CL:0002078;1.11e-13;45!CL:0000576;1.70e-13;48!CL:0002544;2.17e-12;6!CL:0000213;6.06e-12;58!CL:0000215;6.06e-12;58!CL:0002543;1.24e-11;6!CL:0000766;2.81e-10;69 | |ontology_enrichment_celltype_v019=CL:0002139;7.92e-37;24!CL:0000071;5.74e-33;18!CL:0000860;2.25e-30;33!CL:0002057;2.25e-30;33!CL:0000115;3.90e-22;36!CL:0000473;3.63e-21;39!CL:0000234;3.63e-21;39!CL:1000413;6.76e-18;9!CL:0002078;1.11e-13;45!CL:0000576;1.70e-13;48!CL:0002544;2.17e-12;6!CL:0000213;6.06e-12;58!CL:0000215;6.06e-12;58!CL:0002543;1.24e-11;6!CL:0000766;2.81e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.17e-37,24;CL:0000071,1.82e-33,18;CL:0002546,1.82e-33,18;CL:0000115,3.74e-27,36;CL:0000860,4.83e-25,42;CL:0002057,4.83e-25,42;CL:0000473,9.34e-23,48;CL:0000234,9.34e-23,48;CL:0002078,3.47e-20,45;CL:0000213,4.46e-20,58;CL:0000215,4.46e-20,58;CL:0000839,2.26e-18,66;CL:1000413,2.70e-18,9;CL:0000557,5.70e-18,67;CL:0000766,2.39e-17,72;CL:0002194,1.44e-16,59;CL:0000576,1.44e-16,59;CL:0000040,1.44e-16,59;CL:0000559,1.44e-16,59;CL:0002009,8.87e-16,61;CL:0002544,1.01e-12,6;CL:0000222,5.33e-12,121;CL:0002543,6.37e-12,6;CL:0000763,2.10e-10,108;CL:0000049,2.10e-10,108;CL:0000076,1.17e-09,63;CL:0002618,7.68e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;5.74e-33;18!CL:0002057;7.33e-19;42 | |ontology_enrichment_development_v019=CL:0002546;5.74e-33;18!CL:0002057;7.33e-19;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.37e-19!216;UBERON:0001986!1.18e-15!18;UBERON:0004638!1.18e-15!18;UBERON:0004852!1.18e-15!18;UBERON:0000055!1.34e-15!69;UBERON:0002049!1.37e-15!79;UBERON:0007798!1.37e-15!79;UBERON:0001981!8.69e-14!60;UBERON:0007500!8.69e-14!60;UBERON:0004537!8.69e-14!60;UBERON:0006965!8.69e-14!60;UBERON:0004535!7.13e-13!110;UBERON:0000487!1.72e-12!22;UBERON:0001009!6.24e-12!113;UBERON:0004872!8.91e-12!84;UBERON:0003914!1.89e-11!118;UBERON:0001637!8.34e-11!42;UBERON:0003509!8.34e-11!42;UBERON:0004572!8.34e-11!42;UBERON:0002371!4.07e-10!80;UBERON:0006914!5.86e-10!25;UBERON:0001474!4.17e-09!86;UBERON:0004573!5.17e-09!33;UBERON:0004571!5.17e-09!33;UBERON:0003915!5.76e-09!9;UBERON:0004700!5.76e-09!9;UBERON:0001917!5.76e-09!9;UBERON:0002405!9.30e-09!115;UBERON:0002193!9.39e-09!112;UBERON:0000926!5.04e-08!448;UBERON:0004120!5.04e-08!448;UBERON:0006603!5.04e-08!448;UBERON:0000947!8.86e-08!21;UBERON:0010191!8.86e-08!21;UBERON:0002390!1.72e-07!102;UBERON:0003061!1.72e-07!102 | |ontology_enrichment_uberon=UBERON:0003081!4.37e-19!216;UBERON:0001986!1.18e-15!18;UBERON:0004638!1.18e-15!18;UBERON:0004852!1.18e-15!18;UBERON:0000055!1.34e-15!69;UBERON:0002049!1.37e-15!79;UBERON:0007798!1.37e-15!79;UBERON:0001981!8.69e-14!60;UBERON:0007500!8.69e-14!60;UBERON:0004537!8.69e-14!60;UBERON:0006965!8.69e-14!60;UBERON:0004535!7.13e-13!110;UBERON:0000487!1.72e-12!22;UBERON:0001009!6.24e-12!113;UBERON:0004872!8.91e-12!84;UBERON:0003914!1.89e-11!118;UBERON:0001637!8.34e-11!42;UBERON:0003509!8.34e-11!42;UBERON:0004572!8.34e-11!42;UBERON:0002371!4.07e-10!80;UBERON:0006914!5.86e-10!25;UBERON:0001474!4.17e-09!86;UBERON:0004573!5.17e-09!33;UBERON:0004571!5.17e-09!33;UBERON:0003915!5.76e-09!9;UBERON:0004700!5.76e-09!9;UBERON:0001917!5.76e-09!9;UBERON:0002405!9.30e-09!115;UBERON:0002193!9.39e-09!112;UBERON:0000926!5.04e-08!448;UBERON:0004120!5.04e-08!448;UBERON:0006603!5.04e-08!448;UBERON:0000947!8.86e-08!21;UBERON:0010191!8.86e-08!21;UBERON:0002390!1.72e-07!102;UBERON:0003061!1.72e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-33;18!UBERON:0001986;5.74e-33;18!UBERON:0004852;5.74e-33;18!UBERON:0000487;6.20e-26;22!UBERON:0006914;3.78e-22;25!UBERON:0003915;6.76e-18;9!UBERON:0004700;6.76e-18;9!UBERON:0001917;6.76e-18;9!UBERON:0000490;4.39e-16;33!UBERON:0007500;1.08e-11;56!UBERON:0001981;1.08e-11;56!UBERON:0004537;1.08e-11;56!UBERON:0000055;1.51e-11;65!UBERON:0001637;2.22e-11;42!UBERON:0003509;2.22e-11;42!UBERON:0004572;2.22e-11;42!UBERON:0004573;2.32e-09;33!UBERON:0004571;2.32e-09;33!UBERON:0000947;5.99e-09;21!UBERON:0010191;5.99e-09;21!UBERON:0002049;3.77e-08;75!UBERON:0007798;3.77e-08;75!UBERON:0003914;7.84e-08;74!UBERON:0001638;1.89e-07;9!UBERON:0003920;1.89e-07;9!UBERON:0004582;1.89e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004638;5.74e-33;18!UBERON:0001986;5.74e-33;18!UBERON:0004852;5.74e-33;18!UBERON:0000487;6.20e-26;22!UBERON:0006914;3.78e-22;25!UBERON:0003915;6.76e-18;9!UBERON:0004700;6.76e-18;9!UBERON:0001917;6.76e-18;9!UBERON:0000490;4.39e-16;33!UBERON:0007500;1.08e-11;56!UBERON:0001981;1.08e-11;56!UBERON:0004537;1.08e-11;56!UBERON:0000055;1.51e-11;65!UBERON:0001637;2.22e-11;42!UBERON:0003509;2.22e-11;42!UBERON:0004572;2.22e-11;42!UBERON:0004573;2.32e-09;33!UBERON:0004571;2.32e-09;33!UBERON:0000947;5.99e-09;21!UBERON:0010191;5.99e-09;21!UBERON:0002049;3.77e-08;75!UBERON:0007798;3.77e-08;75!UBERON:0003914;7.84e-08;74!UBERON:0001638;1.89e-07;9!UBERON:0003920;1.89e-07;9!UBERON:0004582;1.89e-07;9 | ||
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| ||
|short_description=p3@ENST00000429588 | |short_description=p3@ENST00000429588 | ||
}} | }} |
Latest revision as of 17:41, 28 July 2015
Short description: | p3@ENST00000429588 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000429588_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_ENST00000429588_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.17e-37 | 24 |
blood vessel endothelial cell | 1.82e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.82e-33 | 18 |
endothelial cell | 3.74e-27 | 36 |
classical monocyte | 4.83e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.83e-25 | 42 |
defensive cell | 9.34e-23 | 48 |
phagocyte | 9.34e-23 | 48 |
meso-epithelial cell | 3.47e-20 | 45 |
lining cell | 4.46e-20 | 58 |
barrier cell | 4.46e-20 | 58 |
myeloid lineage restricted progenitor cell | 2.26e-18 | 66 |
endothelial cell of artery | 2.70e-18 | 9 |
granulocyte monocyte progenitor cell | 5.70e-18 | 67 |
myeloid leukocyte | 2.39e-17 | 72 |
monopoietic cell | 1.44e-16 | 59 |
monocyte | 1.44e-16 | 59 |
monoblast | 1.44e-16 | 59 |
promonocyte | 1.44e-16 | 59 |
macrophage dendritic cell progenitor | 8.87e-16 | 61 |
aortic endothelial cell | 1.01e-12 | 6 |
mesodermal cell | 5.33e-12 | 121 |
vein endothelial cell | 6.37e-12 | 6 |
myeloid cell | 2.10e-10 | 108 |
common myeloid progenitor | 2.10e-10 | 108 |
squamous epithelial cell | 1.17e-09 | 63 |
endothelial cell of umbilical vein | 7.68e-07 | 3 |