FFCP PHASE1:Hg19::chr8:131207623..131207625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:131207623..131207625,- | |||
|description=CAGE_peak_at_chr8:131207623..131207625,- | |description=CAGE_peak_at_chr8:131207623..131207625,- | ||
|id=chr8:131207623..131207625,- | |id=chr8:131207623..131207625,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.38e-12;39!CL:0000234;1.38e-12;39!CL:0000860;7.67e-11;33!CL:0002057;7.67e-11;33!CL:0000766;2.40e-07;69 | |ontology_enrichment_celltype_v019=CL:0000473;1.38e-12;39!CL:0000234;1.38e-12;39!CL:0000860;7.67e-11;33!CL:0002057;7.67e-11;33!CL:0000766;2.40e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.39e-11,48;CL:0000234,1.39e-11,48;CL:0000839,6.46e-11,66;CL:0002194,1.37e-10,59;CL:0000576,1.37e-10,59;CL:0000040,1.37e-10,59;CL:0000559,1.37e-10,59;CL:0002009,3.58e-10,61;CL:0000766,6.30e-10,72;CL:0000557,4.50e-09,67;CL:0000860,5.73e-09,42;CL:0002057,5.73e-09,42;CL:0000763,5.32e-08,108;CL:0000049,5.32e-08,108;CL:0000511,7.39e-07,1;CL:0002625,7.39e-07,1;CL:0000216,7.39e-07,1;CL:0000228,9.79e-07,1;CL:0002372,9.79e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;5.88e-07;42 | |ontology_enrichment_development_v019=CL:0002057;5.88e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:1799,5.26e-07,1;DOID:10165,5.26e-07,1;DOID:1798,5.26e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.94e-07;1!UBERON:0002426;3.82e-07;1!UBERON:0003831;3.82e-07;1!UBERON:0003898;3.82e-07;1!UBERON:0004830;3.82e-07;1!UBERON:0003830;3.82e-07;1!UBERON:0005175;3.82e-07;1!UBERON:0001774;3.82e-07;1!UBERON:0001103;3.82e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0007029;2.94e-07;1!UBERON:0002426;3.82e-07;1!UBERON:0003831;3.82e-07;1!UBERON:0003898;3.82e-07;1!UBERON:0004830;3.82e-07;1!UBERON:0003830;3.82e-07;1!UBERON:0005175;3.82e-07;1!UBERON:0001774;3.82e-07;1!UBERON:0001103;3.82e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.52e-08,76;UBERON:0007029,2.95e-07,1;UBERON:0002426,3.95e-07,1;UBERON:0003831,3.95e-07,1;UBERON:0003898,3.95e-07,1;UBERON:0004830,3.95e-07,1;UBERON:0003830,3.95e-07,1;UBERON:0005175,3.95e-07,1;UBERON:0001774,3.95e-07,1;UBERON:0001103,3.95e-07,1;UBERON:0010084,3.95e-07,1;UBERON:0002405,4.12e-07,93;UBERON:0001474,5.01e-07,82;UBERON:0002135,5.89e-07,1;UBERON:0002171,6.60e-07,1;UBERON:0006518,6.60e-07,1;UBERON:0008949,6.60e-07,1;UBERON:0000101,6.60e-07,1;UBERON:0002167,6.60e-07,1;UBERON:0001136,7.39e-07,1;UBERON:0001343,7.39e-07,1;UBERON:0004910,7.39e-07,1;UBERON:0005154,7.39e-07,1;UBERON:0005295,7.39e-07,1;UBERON:0004813,7.39e-07,1;UBERON:0005297,7.39e-07,1;UBERON:0005294,7.39e-07,1;UBERON:0010141,7.39e-07,1;UBERON:0005891,7.39e-07,1;UBERON:0002193,7.39e-07,108;UBERON:0000989,9.25e-07,1;UBERON:0008811,9.25e-07,1;UBERON:0006258,9.25e-07,1;UBERON:0005876,9.25e-07,1;UBERON:0004874,9.25e-07,1 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.410623275218653,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0.464448369948228,0,0.30120591877825,0,0.309868802321207,0.426507697462265,0,0.553995408531877,0.802177789880567,0,0.671746422719773,0.647787332037959,0.515151135268373,0.145398238779565,0,0,0.697287110717054,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,1.03423704220986,1.29096936716765,1.35426486594342,0.376484679085209,0.545812300115692,0,1.53041946185451,0,0,0.329851300186716,0.199463657621632,0,2.61188314765726,0,0,1.50749199154046,0,0,2.42159801053347,0.736555271975129,1.26584954976354,0,0.212604299965044,0,0,0.450530678524519,0.16072558669708,0.285012743741249,0.39783335439818,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.472674085820339,0.221729397462564,0.43917392846563,0.261958150995425,0,0,0.649094787309367,0.870648686496336,0.531831842075461,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0,1.67360306382335,0.402829317109147,0,0,0,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0,0,0,0.490385709340376,0,0,0.234321431833797,0,0,0,0.23486899728753,0.485618833104395,0.140450806702248,0.204154171254893,0.491337269247072,0,1.18800285728205,0.247266929278557,0,0,0.841680569770331,0.375355559615893,0,0.438977620880838,0,0.45071417671979,0,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.570762456703795,0,0,1.23108503043699,0.468008530278475,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0,0,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,1.42636905040718,0.144781306667579,0.410952645100767,0,0.224170287987055,0,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,2.99161459204025,0.414415513436035,0.12269149171914,0.500170521059677,0,0.623912584592421,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0.106727557803444,0,0,0,0,0.61384789315225,0.841980283299221,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,0.412164046590889,0.0915694648183434,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.462145851343933,0.15350367472613,0.551346289938122,0.322260734604821,0,0.255679882248303,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,1.52927441428475,0.569647187174163,0.238231775457789,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0,0.497992903438899,0.159426272728822,0,0,0.635020748171649,0,0,0.456469358066384,0,0,0,0.1605880751037,0,1.27753871307098,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0.852408440419239,0,0.593929361665277,0.307160702099232,0,0.422008249231538,0.890469640183247,0.659215496907038,1.90012867315194,0.19924798825107,0.276283915531148,0.503865495708552,0.920418142519393,0.123084805461069,0.311039587661807,0.898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0.371072392647405,0,0.260427761085233,0.262379999988587,0,0.227586896570999,0,0,0.689486746482929,0.583209226766509,0.520874984799877,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.384751292518985,0.341826167541004,0.46112780877612,0,0.108647371922008,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0.335643173951685,0.37950746544837,0.317873157960757,0.421996129056054,0.163232808159148,0,0,0,0,0.611030144933625,0.593042257361244,0.247127877893006,0.313265848516366,0,2.40773294189637,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0.315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| ||
|short_description=p@chr8:131207623..131207625,- | |short_description=p@chr8:131207623..131207625,- | ||
}} | }} |
Latest revision as of 15:05, 31 July 2015
Short description: | p@chr8:131207623..131207625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:131207623..131207625, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.39e-11 | 48 |
phagocyte | 1.39e-11 | 48 |
myeloid lineage restricted progenitor cell | 6.46e-11 | 66 |
monopoietic cell | 1.37e-10 | 59 |
monocyte | 1.37e-10 | 59 |
monoblast | 1.37e-10 | 59 |
promonocyte | 1.37e-10 | 59 |
macrophage dendritic cell progenitor | 3.58e-10 | 61 |
myeloid leukocyte | 6.30e-10 | 72 |
granulocyte monocyte progenitor cell | 4.50e-09 | 67 |
classical monocyte | 5.73e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-09 | 42 |
myeloid cell | 5.32e-08 | 108 |
common myeloid progenitor | 5.32e-08 | 108 |
androgen binding protein secreting cell | 7.39e-07 | 1 |
seminiferous tubule epithelial cell | 7.39e-07 | 1 |
Sertoli cell | 7.39e-07 | 1 |
multinucleate cell | 9.79e-07 | 1 |
myotube | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.52e-08 | 76 |
surface | 2.95e-07 | 1 |
chest muscle | 3.95e-07 | 1 |
respiratory system muscle | 3.95e-07 | 1 |
skeletal muscle of trunk | 3.95e-07 | 1 |
respiratory system skeletal muscle | 3.95e-07 | 1 |
thoracic segment muscle | 3.95e-07 | 1 |
chest organ | 3.95e-07 | 1 |
muscle of trunk | 3.95e-07 | 1 |
diaphragm | 3.95e-07 | 1 |
future diaphragm | 3.95e-07 | 1 |
immune system | 4.12e-07 | 93 |
bone element | 5.01e-07 | 82 |
mitral valve | 5.89e-07 | 1 |
lower lobe of right lung | 6.60e-07 | 1 |
right lung lobe | 6.60e-07 | 1 |
lower lobe of lung | 6.60e-07 | 1 |
lobe of lung | 6.60e-07 | 1 |
right lung | 6.60e-07 | 1 |
mesothelium | 7.39e-07 | 1 |
seminiferous tubule of testis | 7.39e-07 | 1 |
epithelium of male gonad | 7.39e-07 | 1 |
epithelial cord | 7.39e-07 | 1 |
sex cord | 7.39e-07 | 1 |
seminiferous tubule epithelium | 7.39e-07 | 1 |
testis sex cord | 7.39e-07 | 1 |
genital ridge | 7.39e-07 | 1 |
primitive sex cord of indifferent gonad | 7.39e-07 | 1 |
coelomic epithelium | 7.39e-07 | 1 |
hemolymphoid system | 7.39e-07 | 108 |
penis | 9.25e-07 | 1 |
intromittent organ | 9.25e-07 | 1 |
lateral plate mesenchyme | 9.25e-07 | 1 |
undifferentiated genital tubercle | 9.25e-07 | 1 |
somatopleure | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.26e-07 | 1 |
endocrine pancreas cancer | 5.26e-07 | 1 |
pancreatic endocrine carcinoma | 5.26e-07 | 1 |