FFCP PHASE1:Hg19::chr11:65407251..65407280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6494 | |EntrezGene=6494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10885 | |HGNC=10885 | ||
|TSSclassifier=strong | |||
|UniProt=F6RY50 | |UniProt=F6RY50 | ||
|association_with_transcript=-56bp_to_ENST00000527525_5end | |association_with_transcript=-56bp_to_ENST00000527525_5end | ||
|cluster_id=chr11:65407251..65407280,+ | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_7_at_SIPA1_5end | |description=CAGE_peak_7_at_SIPA1_5end | ||
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|ontology_enrichment_celltype=CL:0000542!8.04e-36!53;CL:0000051!8.04e-36!53;CL:0000838!6.23e-35!52;CL:0000738!1.25e-34!140;CL:0002087!5.51e-29!119;CL:0000037!1.58e-27!172;CL:0000566!1.58e-27!172;CL:0000988!1.51e-25!182;CL:0002032!2.28e-25!165;CL:0000837!2.28e-25!165;CL:0000791!1.01e-24!18;CL:0000789!1.01e-24!18;CL:0002420!1.01e-24!18;CL:0002419!1.01e-24!18;CL:0000790!1.01e-24!18;CL:0002031!2.28e-24!124;CL:0000084!9.15e-20!25;CL:0000827!9.15e-20!25;CL:0000625!2.79e-16!11;CL:0000945!4.72e-13!24;CL:0000826!4.72e-13!24;CL:0000094!1.08e-11!8;CL:0000236!1.23e-09!14;CL:0000624!4.32e-09!6;CL:0000081!6.01e-08!11 | |ontology_enrichment_celltype=CL:0000542!8.04e-36!53;CL:0000051!8.04e-36!53;CL:0000838!6.23e-35!52;CL:0000738!1.25e-34!140;CL:0002087!5.51e-29!119;CL:0000037!1.58e-27!172;CL:0000566!1.58e-27!172;CL:0000988!1.51e-25!182;CL:0002032!2.28e-25!165;CL:0000837!2.28e-25!165;CL:0000791!1.01e-24!18;CL:0000789!1.01e-24!18;CL:0002420!1.01e-24!18;CL:0002419!1.01e-24!18;CL:0000790!1.01e-24!18;CL:0002031!2.28e-24!124;CL:0000084!9.15e-20!25;CL:0000827!9.15e-20!25;CL:0000625!2.79e-16!11;CL:0000945!4.72e-13!24;CL:0000826!4.72e-13!24;CL:0000094!1.08e-11!8;CL:0000236!1.23e-09!14;CL:0000624!4.32e-09!6;CL:0000081!6.01e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.93e-41;18!CL:0000789;1.93e-41;18!CL:0002419;1.93e-41;18!CL:0000084;5.55e-32;25!CL:0000625;8.49e-30;11!CL:0000542;3.96e-20;53!CL:0000094;1.72e-16;8!CL:0000624;6.00e-16;6!CL:0000081;1.10e-11;11!CL:0000775;2.32e-09;3!CL:0000898;4.92e-09;3!CL:0000623;1.31e-08;3!CL:0000226;2.17e-08;3!CL:0000842;2.17e-08;3!CL:0000771;2.93e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;1.93e-41;18!CL:0000789;1.93e-41;18!CL:0002419;1.93e-41;18!CL:0000084;5.55e-32;25!CL:0000625;8.49e-30;11!CL:0000542;3.96e-20;53!CL:0000094;1.72e-16;8!CL:0000624;6.00e-16;6!CL:0000081;1.10e-11;11!CL:0000775;2.32e-09;3!CL:0000898;4.92e-09;3!CL:0000623;1.31e-08;3!CL:0000226;2.17e-08;3!CL:0000842;2.17e-08;3!CL:0000771;2.93e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.07e-41,18;CL:0000789,1.07e-41,18;CL:0002420,1.07e-41,18;CL:0002419,1.07e-41,18;CL:0000790,1.07e-41,18;CL:0000838,2.69e-36,52;CL:0000542,1.85e-35,53;CL:0000051,1.85e-35,53;CL:0000084,3.93e-32,25;CL:0000827,3.93e-32,25;CL:0000625,5.93e-30,11;CL:0000738,3.07e-21,136;CL:0000094,1.28e-16,8;CL:0002087,1.71e-16,115;CL:0000624,4.59e-16,6;CL:0000037,2.88e-15,168;CL:0000988,5.48e-14,177;CL:0002032,2.59e-13,161;CL:0000837,2.59e-13,161;CL:0002031,3.70e-12,120;CL:0000081,8.93e-12,11;CL:0000775,1.88e-09,3;CL:0000898,4.86e-09,3;CL:0000623,1.23e-08,3;CL:0000825,1.23e-08,3;CL:0000226,2.20e-08,3;CL:0000842,2.20e-08,3;CL:0000771,2.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.93e-41;18!CL:0000051;3.96e-20;53 | |ontology_enrichment_development_v019=CL:0000790;1.93e-41;18!CL:0000051;3.96e-20;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.98e-13!15;UBERON:0000179!5.98e-13!15;UBERON:0000463!5.98e-13!15;UBERON:0002390!2.88e-09!102;UBERON:0003061!2.88e-09!102;UBERON:0002193!7.16e-09!112;UBERON:0007023!1.64e-08!115;UBERON:0004177!3.76e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!5.98e-13!15;UBERON:0000179!5.98e-13!15;UBERON:0000463!5.98e-13!15;UBERON:0002390!2.88e-09!102;UBERON:0003061!2.88e-09!102;UBERON:0002193!7.16e-09!112;UBERON:0007023!1.64e-08!115;UBERON:0004177!3.76e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.79e-25;15!UBERON:0000179;8.79e-25;15!UBERON:0000463;8.79e-25;15!UBERON:0002390;1.38e-16;32!UBERON:0002193;1.49e-11;42!UBERON:0004177;2.37e-08;5!UBERON:0005057;2.37e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.79e-25;15!UBERON:0000179;8.79e-25;15!UBERON:0000463;8.79e-25;15!UBERON:0002390;1.38e-16;32!UBERON:0002193;1.49e-11;42!UBERON:0004177;2.37e-08;5!UBERON:0005057;2.37e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.01e-24,15;UBERON:0000179,1.01e-24,15;UBERON:0000463,1.01e-24,15;UBERON:0004177,2.88e-09,7;UBERON:0005057,2.88e-09,7;UBERON:0002370,8.18e-07,4;UBERON:0005058,8.18e-07,4;UBERON:0009113,8.18e-07,4;UBERON:0003295,8.18e-07,4;UBERON:0005562,8.18e-07,4 | |||
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|short_description=p7@SIPA1 | |short_description=p7@SIPA1 | ||
}} | }} |
Latest revision as of 10:26, 19 September 2015
Short description: | p7@SIPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SIPA1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -56bp_to_ENST00000527525_5end |
EntrezGene: | SIPA1 |
HGNC: | 10885 |
UniProt: | F6RY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.07e-41 | 18 |
alpha-beta T cell | 1.07e-41 | 18 |
immature T cell | 1.07e-41 | 18 |
mature T cell | 1.07e-41 | 18 |
immature alpha-beta T cell | 1.07e-41 | 18 |
lymphoid lineage restricted progenitor cell | 2.69e-36 | 52 |
lymphocyte | 1.85e-35 | 53 |
common lymphoid progenitor | 1.85e-35 | 53 |
T cell | 3.93e-32 | 25 |
pro-T cell | 3.93e-32 | 25 |
CD8-positive, alpha-beta T cell | 5.93e-30 | 11 |
leukocyte | 3.07e-21 | 136 |
granulocyte | 1.28e-16 | 8 |
nongranular leukocyte | 1.71e-16 | 115 |
CD4-positive, alpha-beta T cell | 4.59e-16 | 6 |
hematopoietic stem cell | 2.88e-15 | 168 |
hematopoietic cell | 5.48e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.59e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-13 | 161 |
hematopoietic lineage restricted progenitor cell | 3.70e-12 | 120 |
blood cell | 8.93e-12 | 11 |
neutrophil | 1.88e-09 | 3 |
naive T cell | 4.86e-09 | 3 |
natural killer cell | 1.23e-08 | 3 |
pro-NK cell | 1.23e-08 | 3 |
single nucleate cell | 2.20e-08 | 3 |
mononuclear cell | 2.20e-08 | 3 |
eosinophil | 2.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.01e-24 | 15 |
haemolymphatic fluid | 1.01e-24 | 15 |
organism substance | 1.01e-24 | 15 |
hemopoietic organ | 2.88e-09 | 7 |
immune organ | 2.88e-09 | 7 |
thymus | 8.18e-07 | 4 |
hemolymphoid system gland | 8.18e-07 | 4 |
thymic region | 8.18e-07 | 4 |
pharyngeal gland | 8.18e-07 | 4 |
thymus primordium | 8.18e-07 | 4 |