FFCP PHASE1:Hg19::chr1:36396364..36396380,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:36396364..36396380,+
|short_description=p6@EIF2C3
|description=CAGE_peak_6_at_EIF2C3_5end
|association_with_transcript=45bp_to_ENST00000324350,uc001bzn.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=192669 | |EntrezGene=192669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18421 | |HGNC=18421 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TA56 | |UniProt=Q5TA56 | ||
|association_with_transcript=45bp_to_ENST00000324350,uc001bzn.1_5end | |||
|cluster_id=chr1:36396364..36396380,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_EIF2C3_5end | |||
|id=chr1:36396364..36396380,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.06e-19!45;CL:0002057!3.37e-18!42;CL:0000557!3.32e-17!71;CL:0000766!7.17e-16!76;CL:0002009!8.78e-16!65;CL:0000839!2.06e-15!70;CL:0002194!1.30e-14!63;CL:0000576!1.30e-14!63;CL:0000040!1.30e-14!63;CL:0000559!1.30e-14!63;CL:0000763!1.89e-13!112;CL:0000049!1.89e-13!112;CL:0000738!3.05e-07!140;CL:0002031!5.61e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.30e-09;6!CL:0002397;6.30e-09;6!CL:0000860;7.30e-09;33!CL:0002057;7.30e-09;33!CL:0000576;1.62e-08;48!CL:0000473;3.13e-08;39!CL:0000234;3.13e-08;39!CL:0001014;1.23e-07;2!CL:0001016;1.23e-07;2!CL:0000766;1.54e-07;69!CL:0000097;5.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.90e-19,67;CL:0000860,1.92e-17,42;CL:0002057,1.92e-17,42;CL:0000473,1.41e-16,48;CL:0000234,1.41e-16,48;CL:0000839,1.56e-15,66;CL:0000766,2.63e-15,72;CL:0002009,3.43e-15,61;CL:0002194,2.26e-12,59;CL:0000576,2.26e-12,59;CL:0000040,2.26e-12,59;CL:0000559,2.26e-12,59;CL:0002393,3.05e-12,9;CL:0002397,3.05e-12,9;CL:0000763,7.93e-12,108;CL:0000049,7.93e-12,108;CL:0002031,4.02e-08,120;CL:0000738,4.08e-08,136;CL:0001014,8.97e-08,2;CL:0001016,8.97e-08,2;CL:0000097,5.47e-07,5;CL:0002028,5.47e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.64e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.73e-14!86;UBERON:0002371!1.53e-13!80;UBERON:0004765!3.27e-11!101;UBERON:0001434!3.27e-11!101;UBERON:0002405!1.36e-10!115;UBERON:0002390!1.31e-09!102;UBERON:0003061!1.31e-09!102;UBERON:0000062!4.29e-09!511;UBERON:0002193!1.88e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.57e-07;2!UBERON:0000007;4.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.57e-16,76;UBERON:0001474,2.12e-14,82;UBERON:0004765,1.27e-12,90;UBERON:0002390,2.51e-12,98;UBERON:0003061,2.51e-12,98;UBERON:0002405,4.88e-12,93;UBERON:0001434,8.22e-11,100;UBERON:0002193,1.18e-10,108;UBERON:0002133,1.61e-07,2;UBERON:0000007,2.16e-07,2 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.410623275218653,0.376627918784408,0.229240217243854,0.164201178899891,0.157421562627358,0,1.15148819429164,0.464448369948228,0,0.30120591877825,0,0.154934401160603,0,0,2.21598163412751,2.20598892217156,0.868043482863407,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,0.755751887377619,0.485168122375632,1.39457422143411,0.822335776043652,2.78735733805593,0.28769239232215,1.0246428261164,0.47296445977717,1.37898272294647,0,2.70852973188684,0.376484679085209,0.818718450173537,0.449446968890169,0.612167784741805,0.962787081228281,1.91801137739712,0.989553900560148,0.598390972864896,0.852449501065388,0.580418477257168,3.40431134814684,1.24564449799115,1.00499466102697,1.0429658368404,0.434377689410233,0.605399502633369,0,0.949387162322653,0.422510572623884,1.27562579979026,1.25795187305026,1.57260083605093,0.600707571366025,0.48217676009124,1.42506371870624,0.79566670879636,1.46131323011707,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0.383587685530591,0,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0.775250277507987,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.337834441449967,1.53316637465883,0,0,0,0,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.817309515567294,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0.206105058476878,0.772921620136887,0,0.506328996723799,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0,0,0.439001141634502,0,0,0,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.594524649154913,0,0.503946384596579,0.141775097242386,0,0,0,18.7212030400459,0.616339038092582,3.10992173311158,0.144119953416961,3.7872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0.289562613335158,0,0.358121926479791,0.448340575974109,0.788123040807709,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.167516265334349,1.27587750330633,0.749007023947182,0,0.828831026872071,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,1.2942852049117,0.640365346820666,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.483437798366489,0.200506470303285,0.0920809889358963,0.34444334449382,0.546273504020151,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0.640986253728404,0.082509499920588,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0.0890320356467374,0,0.768760269460425,2.04180339991335,0.2023155617111,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0.762520775695299,0,0,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0.48763373908959,0.731140468893853,0,0.272999822815972,0.707027159768564,0,1.10273068709225,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,1.04980416073495,0,0,0,0.376575203107117,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.747768497892312,1.92495971052672,0.490080431962063,0,0,0.0711418433484141,0,0.399158742865633,0,0.423347165447766,0.649243880549111,0,0,0,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0.390776190804081,0,0,0.270455678475983,0.33307196799782,2.81974010175699,0.561421621224659,0.439524537815682,0.242721043499027,0.111443384277478,0.852408440419239,0.47748896947538,0.593929361665277,0.614321404198464,0,0,0.222617410045812,0.659215496907038,1.26675244876796,0.398495976502139,1.38141957765574,0,0.20453736500431,0,0,0.449341755736634,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0.6944999797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| ||
|short_description=p6@EIF2C3 | |||
}} | }} |
Latest revision as of 20:02, 17 September 2015
Short description: | p6@EIF2C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EIF2C3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 45bp_to_ENST00000324350, uc001bzn.1_5end |
EntrezGene: | EIF2C3 |
HGNC: | 18421 |
UniProt: | Q5TA56 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.90e-19 | 67 |
classical monocyte | 1.92e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-17 | 42 |
defensive cell | 1.41e-16 | 48 |
phagocyte | 1.41e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.56e-15 | 66 |
myeloid leukocyte | 2.63e-15 | 72 |
macrophage dendritic cell progenitor | 3.43e-15 | 61 |
monopoietic cell | 2.26e-12 | 59 |
monocyte | 2.26e-12 | 59 |
monoblast | 2.26e-12 | 59 |
promonocyte | 2.26e-12 | 59 |
intermediate monocyte | 3.05e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.05e-12 | 9 |
myeloid cell | 7.93e-12 | 108 |
common myeloid progenitor | 7.93e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 4.02e-08 | 120 |
leukocyte | 4.08e-08 | 136 |
CD1a-positive Langerhans cell | 8.97e-08 | 2 |
immature CD1a-positive Langerhans cell | 8.97e-08 | 2 |
mast cell | 5.47e-07 | 5 |
basophil mast progenitor cell | 5.47e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.57e-16 | 76 |
bone element | 2.12e-14 | 82 |
skeletal element | 1.27e-12 | 90 |
hematopoietic system | 2.51e-12 | 98 |
blood island | 2.51e-12 | 98 |
immune system | 4.88e-12 | 93 |
skeletal system | 8.22e-11 | 100 |
hemolymphoid system | 1.18e-10 | 108 |
atrioventricular valve | 1.61e-07 | 2 |
pituitary gland | 2.16e-07 | 2 |