FFCP PHASE1:Hg19::chr7:6414211..6414222,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5879 | |EntrezGene=5879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9801 | |HGNC=9801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000488373_5end | |association_with_transcript=17bp_to_ENST00000488373_5end | ||
|cluster_id=chr7:6414211..6414222,+ | |||
|coexpression_cluster_id=C821 | |coexpression_cluster_id=C821 | ||
|description=CAGE_peak_2_at_RAC1_5end | |description=CAGE_peak_2_at_RAC1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.94e-47!42;CL:0000860!3.30e-43!45;CL:0000557!8.32e-38!71;CL:0000766!4.03e-37!76;CL:0002009!7.01e-35!65;CL:0000839!3.56e-33!70;CL:0002194!1.30e-32!63;CL:0000576!1.30e-32!63;CL:0000040!1.30e-32!63;CL:0000559!1.30e-32!63;CL:0000763!3.32e-30!112;CL:0000049!3.32e-30!112;CL:0000738!8.88e-20!140;CL:0002032!9.35e-17!165;CL:0000837!9.35e-17!165;CL:0002031!1.80e-16!124;CL:0000037!2.83e-15!172;CL:0000566!2.83e-15!172;CL:0000988!2.20e-13!182;CL:0002087!5.40e-13!119;CL:0000453!2.62e-08!5 | |ontology_enrichment_celltype=CL:0002057!1.94e-47!42;CL:0000860!3.30e-43!45;CL:0000557!8.32e-38!71;CL:0000766!4.03e-37!76;CL:0002009!7.01e-35!65;CL:0000839!3.56e-33!70;CL:0002194!1.30e-32!63;CL:0000576!1.30e-32!63;CL:0000040!1.30e-32!63;CL:0000559!1.30e-32!63;CL:0000763!3.32e-30!112;CL:0000049!3.32e-30!112;CL:0000738!8.88e-20!140;CL:0002032!9.35e-17!165;CL:0000837!9.35e-17!165;CL:0002031!1.80e-16!124;CL:0000037!2.83e-15!172;CL:0000566!2.83e-15!172;CL:0000988!2.20e-13!182;CL:0002087!5.40e-13!119;CL:0000453!2.62e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.79e-57;33!CL:0002057;5.79e-57;33!CL:0000473;1.23e-46;39!CL:0000234;1.23e-46;39!CL:0000576;7.62e-35;48!CL:0000766;1.85e-23;69!CL:0000763;2.21e-12;100!CL:0000453;2.67e-11;5!CL:0000738;2.20e-07;136!CL:0002087;3.87e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;5.79e-57;33!CL:0002057;5.79e-57;33!CL:0000473;1.23e-46;39!CL:0000234;1.23e-46;39!CL:0000576;7.62e-35;48!CL:0000766;1.85e-23;69!CL:0000763;2.21e-12;100!CL:0000453;2.67e-11;5!CL:0000738;2.20e-07;136!CL:0002087;3.87e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.31e-66,48;CL:0000234,3.31e-66,48;CL:0000860,8.77e-66,42;CL:0002057,8.77e-66,42;CL:0002009,1.50e-53,61;CL:0002194,3.83e-50,59;CL:0000576,3.83e-50,59;CL:0000040,3.83e-50,59;CL:0000559,3.83e-50,59;CL:0000557,1.00e-49,67;CL:0000766,2.71e-47,72;CL:0000839,1.89e-43,66;CL:0000763,1.80e-38,108;CL:0000049,1.80e-38,108;CL:0000738,6.26e-25,136;CL:0002032,1.21e-20,161;CL:0000837,1.21e-20,161;CL:0002031,1.25e-20,120;CL:0002087,1.68e-19,115;CL:0000037,3.75e-19,168;CL:0000988,2.04e-17,177;CL:0000453,2.60e-11,5;CL:0000048,2.24e-08,427;CL:0000723,5.27e-08,433;CL:0000034,5.70e-08,441;CL:0000134,8.96e-08,354;CL:0002320,2.54e-07,361;CL:0002393,9.67e-07,9;CL:0002397,9.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.45e-47;42!CL:0000049;1.49e-13;108 | |ontology_enrichment_development_v019=CL:0002057;3.45e-47;42!CL:0000049;1.49e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.62e-31!80;UBERON:0001474!4.45e-28!86;UBERON:0004765!6.43e-25!101;UBERON:0001434!6.43e-25!101;UBERON:0002390!5.78e-21!102;UBERON:0003061!5.78e-21!102;UBERON:0002193!8.36e-20!112;UBERON:0002405!1.18e-19!115;UBERON:0002204!1.58e-15!167;UBERON:0001737!9.23e-09!9;UBERON:0003081!1.83e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.62e-31!80;UBERON:0001474!4.45e-28!86;UBERON:0004765!6.43e-25!101;UBERON:0001434!6.43e-25!101;UBERON:0002390!5.78e-21!102;UBERON:0003061!5.78e-21!102;UBERON:0002193!8.36e-20!112;UBERON:0002405!1.18e-19!115;UBERON:0002204!1.58e-15!167;UBERON:0001737!9.23e-09!9;UBERON:0003081!1.83e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-42,76;UBERON:0004765,7.72e-39,90;UBERON:0001474,4.30e-38,82;UBERON:0002405,1.24e-35,93;UBERON:0001434,1.71e-33,100;UBERON:0002390,1.26e-29,98;UBERON:0003061,1.26e-29,98;UBERON:0002193,1.07e-28,108;UBERON:0002204,5.73e-21,167;UBERON:0003081,9.64e-14,203 | |||
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|short_description=p2@RAC1 | |short_description=p2@RAC1 | ||
}} | }} |
Latest revision as of 04:38, 19 September 2015
Short description: | p2@RAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAC1_5end |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | 17bp_to_ENST00000488373_5end |
EntrezGene: | RAC1 |
HGNC: | 9801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.31e-66 | 48 |
phagocyte | 3.31e-66 | 48 |
classical monocyte | 8.77e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.77e-66 | 42 |
macrophage dendritic cell progenitor | 1.50e-53 | 61 |
monopoietic cell | 3.83e-50 | 59 |
monocyte | 3.83e-50 | 59 |
monoblast | 3.83e-50 | 59 |
promonocyte | 3.83e-50 | 59 |
granulocyte monocyte progenitor cell | 1.00e-49 | 67 |
myeloid leukocyte | 2.71e-47 | 72 |
myeloid lineage restricted progenitor cell | 1.89e-43 | 66 |
myeloid cell | 1.80e-38 | 108 |
common myeloid progenitor | 1.80e-38 | 108 |
leukocyte | 6.26e-25 | 136 |
hematopoietic oligopotent progenitor cell | 1.21e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 1.25e-20 | 120 |
nongranular leukocyte | 1.68e-19 | 115 |
hematopoietic stem cell | 3.75e-19 | 168 |
hematopoietic cell | 2.04e-17 | 177 |
Langerhans cell | 2.60e-11 | 5 |
multi fate stem cell | 2.24e-08 | 427 |
somatic stem cell | 5.27e-08 | 433 |
stem cell | 5.70e-08 | 441 |
mesenchymal cell | 8.96e-08 | 354 |
connective tissue cell | 2.54e-07 | 361 |
intermediate monocyte | 9.67e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-42 | 76 |
skeletal element | 7.72e-39 | 90 |
bone element | 4.30e-38 | 82 |
immune system | 1.24e-35 | 93 |
skeletal system | 1.71e-33 | 100 |
hematopoietic system | 1.26e-29 | 98 |
blood island | 1.26e-29 | 98 |
hemolymphoid system | 1.07e-28 | 108 |
musculoskeletal system | 5.73e-21 | 167 |
lateral plate mesoderm | 9.64e-14 | 203 |