FFCP PHASE1:Hg19::chr2:238271947..238271972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238271947..238271972,- | |||
|coexpression_cluster_id=C332 | |coexpression_cluster_id=C332 | ||
|description=CAGE_peak_at_chr2:238271947..238271972,- | |description=CAGE_peak_at_chr2:238271947..238271972,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.06e-37!180;CL:0000057!2.77e-28!75;CL:0000048!1.44e-15!430;CL:0000183!1.10e-14!59;CL:0000680!1.47e-14!57;CL:0000056!1.47e-14!57;CL:0000355!1.47e-14!57;CL:0000723!1.61e-14!436;CL:0000187!8.01e-14!54;CL:0002620!1.16e-13!23;CL:0000034!1.60e-13!444;CL:0000393!2.16e-11!60;CL:0000211!2.16e-11!60;CL:0002320!7.56e-09!365;CL:0000192!1.66e-08!42;CL:0000514!1.66e-08!42;CL:0000499!1.90e-07!27;CL:0002371!2.10e-07!591;CL:0000134!6.46e-07!358 | |ontology_enrichment_celltype=CL:0000055!2.06e-37!180;CL:0000057!2.77e-28!75;CL:0000048!1.44e-15!430;CL:0000183!1.10e-14!59;CL:0000680!1.47e-14!57;CL:0000056!1.47e-14!57;CL:0000355!1.47e-14!57;CL:0000723!1.61e-14!436;CL:0000187!8.01e-14!54;CL:0002620!1.16e-13!23;CL:0000034!1.60e-13!444;CL:0000393!2.16e-11!60;CL:0000211!2.16e-11!60;CL:0002320!7.56e-09!365;CL:0000192!1.66e-08!42;CL:0000514!1.66e-08!42;CL:0000499!1.90e-07!27;CL:0002371!2.10e-07!591;CL:0000134!6.46e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.89e-17;23!CL:0000057;2.54e-12;73!CL:0000134;5.62e-12;55!CL:0000723;1.67e-11;61!CL:0000048;1.47e-10;58!CL:0002320;5.40e-10;188!CL:0000499;1.43e-08;28!CL:0000034;3.18e-08;69!CL:0000188;5.83e-08;9!CL:0002570;5.27e-07;8!CL:0000327;7.54e-07;15 | |ontology_enrichment_celltype_v019=CL:0002620;6.89e-17;23!CL:0000057;2.54e-12;73!CL:0000134;5.62e-12;55!CL:0000723;1.67e-11;61!CL:0000048;1.47e-10;58!CL:0002320;5.40e-10;188!CL:0000499;1.43e-08;28!CL:0000034;3.18e-08;69!CL:0000188;5.83e-08;9!CL:0002570;5.27e-07;8!CL:0000327;7.54e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-31,76;CL:0000048,9.73e-21,427;CL:0000723,9.07e-20,433;CL:0000034,1.59e-18,441;CL:0002620,7.29e-17,23;CL:0002320,1.83e-15,361;CL:0000134,1.87e-12,354;CL:0000680,3.41e-10,58;CL:0000056,3.41e-10,58;CL:0000355,3.41e-10,58;CL:0000187,8.18e-10,55;CL:0000219,1.60e-09,386;CL:0000499,1.76e-08,28;CL:0000393,6.56e-08,61;CL:0000211,6.56e-08,61;CL:0000188,6.76e-08,9;CL:0002570,4.77e-07,8;CL:0000327,8.75e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.74e-07!14 | |ontology_enrichment_disease=DOID:2394!6.74e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.13e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;2.13e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.71e-20!83;UBERON:0002329!7.71e-20!83;UBERON:0003077!7.71e-20!83;UBERON:0003059!7.71e-20!83;UBERON:0007282!7.71e-20!83;UBERON:0009618!7.71e-20!83;UBERON:0007285!7.71e-20!83;UBERON:0004290!1.31e-17!70;UBERON:0002385!2.96e-15!63;UBERON:0001015!2.96e-15!63;UBERON:0000383!2.96e-15!63;UBERON:0001134!8.65e-15!61;UBERON:0002036!8.65e-15!61;UBERON:0003082!8.65e-15!61;UBERON:0000486!3.68e-14!82;UBERON:0005256!3.99e-13!143;UBERON:0003102!5.85e-13!95;UBERON:0002199!2.23e-11!45;UBERON:0002416!2.23e-11!45;UBERON:0002384!1.84e-09!375;UBERON:0002097!5.91e-09!40;UBERON:0002100!4.73e-08!216;UBERON:0000475!5.40e-07!365;UBERON:0007100!9.09e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!7.71e-20!83;UBERON:0002329!7.71e-20!83;UBERON:0003077!7.71e-20!83;UBERON:0003059!7.71e-20!83;UBERON:0007282!7.71e-20!83;UBERON:0009618!7.71e-20!83;UBERON:0007285!7.71e-20!83;UBERON:0004290!1.31e-17!70;UBERON:0002385!2.96e-15!63;UBERON:0001015!2.96e-15!63;UBERON:0000383!2.96e-15!63;UBERON:0001134!8.65e-15!61;UBERON:0002036!8.65e-15!61;UBERON:0003082!8.65e-15!61;UBERON:0000486!3.68e-14!82;UBERON:0005256!3.99e-13!143;UBERON:0003102!5.85e-13!95;UBERON:0002199!2.23e-11!45;UBERON:0002416!2.23e-11!45;UBERON:0002384!1.84e-09!375;UBERON:0002097!5.91e-09!40;UBERON:0002100!4.73e-08!216;UBERON:0000475!5.40e-07!365;UBERON:0007100!9.09e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.42e-10;46!UBERON:0002416;1.42e-10;46!UBERON:0002384;2.51e-10;198!UBERON:0002204;8.27e-10;70!UBERON:0002385;1.42e-09;31!UBERON:0001015;1.42e-09;31!UBERON:0000383;1.42e-09;31!UBERON:0002097;2.61e-09;41!UBERON:0003102;2.29e-08;50!UBERON:0001013;2.10e-07;14!UBERON:0001134;5.37e-07;16!UBERON:0002036;5.37e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002199;1.42e-10;46!UBERON:0002416;1.42e-10;46!UBERON:0002384;2.51e-10;198!UBERON:0002204;8.27e-10;70!UBERON:0002385;1.42e-09;31!UBERON:0001015;1.42e-09;31!UBERON:0000383;1.42e-09;31!UBERON:0002097;2.61e-09;41!UBERON:0003102;2.29e-08;50!UBERON:0001013;2.10e-07;14!UBERON:0001134;5.37e-07;16!UBERON:0002036;5.37e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.34e-16,371;UBERON:0002199,1.77e-15,46;UBERON:0002416,1.77e-15,46;UBERON:0003102,6.40e-14,99;UBERON:0007524,1.58e-13,73;UBERON:0002329,1.85e-13,71;UBERON:0003059,1.85e-13,71;UBERON:0007282,1.85e-13,71;UBERON:0004290,1.85e-13,71;UBERON:0009618,1.85e-13,71;UBERON:0003077,4.43e-13,72;UBERON:0007285,4.43e-13,72;UBERON:0002097,2.55e-12,41;UBERON:0007503,1.28e-11,78;UBERON:0000486,5.20e-11,83;UBERON:0003104,1.66e-10,160;UBERON:0009142,1.66e-10,160;UBERON:0002385,2.56e-10,64;UBERON:0001015,2.56e-10,64;UBERON:0000383,2.56e-10,64;UBERON:0001134,2.97e-10,62;UBERON:0002036,2.97e-10,62;UBERON:0003082,2.97e-10,62;UBERON:0005256,1.31e-09,122;UBERON:0000926,1.13e-07,315;UBERON:0004120,1.13e-07,315;UBERON:0006603,1.13e-07,315;UBERON:0001013,1.92e-07,14 | |||
|phase1_expression=2.36181893051724,7.92171938396638,1.12763523276777,2.00146596706261,1.34088328328186,1.74467704820074,5.06599756336621,1.26343974685366,8.88031135879451,0.982935746006035,0,0,0,4.70312141248177,13.5872924048445,3.36162573225888,8.43772339233568,2.92124036154949,3.41552959153355,0.861847406537515,1.02000345622126,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,2.01210257911091,0.12786256184353,2.1686349143074,5.0133791063589,5.06962816362883,23.0632924644819,9.24606253575008,0,0,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,2.5326102332916,1.45650098894541,26.1021324881421,6.38403087957043,0.560677600142307,1.06748995729705,1.97334038733728,1.55605517699883,3.09834545760283,1.47115712802113,3.93529311876822,13.82822218752,2.10889288650417,2.18512053781224,1.71141546463335,7.02408798593465,2.23125547423153,1.61872944368132,1.40450806702248,3.87892925384297,5.15904132709426,6.19954687054593,3.56400857184616,10.6324779589779,0,1.43723628363248,2.69337782326506,3.00284447692714,0.554128230968366,5.26773145057006,2.14541457059314,1.65261864797256,0.907457465280168,17.7595739331973,8.75585294156127,5.51022943014861,14.4043726120513,4.43125875725287,12.1091053821446,4.46680455195816,8.94514560878711,4.18979122193154,12.3692549379616,3.03764665519588,2.42469085228218,19.1705179958972,3.62707553619505,3.73033303083073,0,0,0,0,0,0.580969714347592,0,0,0,4.69348596989448,14.1513006402435,0,6.50115099244771,11.5500717067134,0,0,0,0,0,0,0,0,0,0,2.80483547606892,2.4694440679884,4.41026134156626,0,0,0,0,0,0.171567810298526,0,0,0,0,3.9096996637239,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,1.45770409648969,2.61576041299968,0.8800594298514,1.55126058909333,0,12.67954128834,6.38251479803689,3.12022310734098,3.60090323966999,2.83698264046557,2.93064396917709,5.00422977803516,12.4802969240032,4.11620168390384,5.5375151329935,3.55391948742546,2.37585561880029,0,0,0.099972991182057,0,0,0,1.67737398844108,3.44585807502342,4.27910715122155,1.88215698667853,2.26023954805422,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,6.01188309423785,14.5049451107306,9.49427582949075,5.40724239980099,5.70972764150918,3.15404830067869,3.86566669475954,2.40756879782175,0,2.0694614258501,5.31380478828349,2.94990669666725,3.12781012085098,4.11182430671755,14.4120238000559,0,0,0,0,1.66435439510497,0.30239029332968,0.744323423456331,1.99500565274481,6.73584226639377,0.768834895534206,1.02341449813341,0.965123526861645,0,10.0236300971726,5.32685175939381,1.72467027628999,10.3850885836724,6.39157081529776,0,0,0,5.0518357192427,19.1195726407053,9.83433112195681,0,0,0,0,0.316654886678627,0,0,1.0795795805107,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,3.0934629853479,4.31336127921004,5.52613229014066,2.34322173223702,8.48619934459362,12.1814022887952,2.72725207731523,6.05417842397814,0,0,0,0,0.929691098594572,22.3516766249754,1.3940745403212,0,0,0,0.55597265731176,0,1.48863347743867,0.632758849437452,0.38126038784765,1.27948895655667,16.261681545289,0.318203247925937,2.35484592059769,2.51821440616641,4.11805544604082,2.35624804691373,0.202182481573316,0,0.842516912477962,2.43816869544795,3.65570234446927,1.05650146756755,4.36799716505554,13.9991377634176,3.39024349860728,0.551365343546124,1.99031692572366,0,4.6302042741335,6.55894752046633,0.405820753925408,0,0.845086807596724,0.573645408816206,0.392996164052485,0.35667105148125,1.41904425628239,3.58882980006029,3.29294892959902,1.89736586882858,2.79947776195986,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,1.97764649072111,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,3.11039587661807,0,0,0.511572370226872,1.1837208676432,0,5.55684950723184,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23120413606075,0,0,0,0,0.638002319463839,1.55715908783166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,1.22206028986725,0,0,0,0,2.40773294189637,0,0,0,0,0.789168805698781,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.7472666824203,3.61170668190395,0,0,0,0.290967049465258,0,0.90392296312213,3.97421581475578,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,5.40590553472505,0.577901179803038,0,0,0,0,0,1.67569440763353,1.14580212005842,0,1.39775300349294,2.14613024068285,0.223171457441873,0.335917362433631,5.40449825313605,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0.157611414598396,0.367182116944987,0,0,0,0.714695326373367,0,0,2.17199840701485,6.91377192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| ||
|short_description=p@chr2:238271947..238271972,- | |short_description=p@chr2:238271947..238271972,- | ||
}} | }} |
Latest revision as of 08:11, 29 July 2015
Short description: | p@chr2:238271947..238271972, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238271947..238271972, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-31 | 76 |
multi fate stem cell | 9.73e-21 | 427 |
somatic stem cell | 9.07e-20 | 433 |
stem cell | 1.59e-18 | 441 |
skin fibroblast | 7.29e-17 | 23 |
connective tissue cell | 1.83e-15 | 361 |
mesenchymal cell | 1.87e-12 | 354 |
muscle precursor cell | 3.41e-10 | 58 |
myoblast | 3.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-10 | 58 |
muscle cell | 8.18e-10 | 55 |
motile cell | 1.60e-09 | 386 |
stromal cell | 1.76e-08 | 28 |
electrically responsive cell | 6.56e-08 | 61 |
electrically active cell | 6.56e-08 | 61 |
cell of skeletal muscle | 6.76e-08 | 9 |
mesenchymal stem cell of adipose | 4.77e-07 | 8 |
extracellular matrix secreting cell | 8.75e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.34e-16 | 371 |
integument | 1.77e-15 | 46 |
integumental system | 1.77e-15 | 46 |
surface structure | 6.40e-14 | 99 |
dense mesenchyme tissue | 1.58e-13 | 73 |
somite | 1.85e-13 | 71 |
presomitic mesoderm | 1.85e-13 | 71 |
presumptive segmental plate | 1.85e-13 | 71 |
dermomyotome | 1.85e-13 | 71 |
trunk paraxial mesoderm | 1.85e-13 | 71 |
paraxial mesoderm | 4.43e-13 | 72 |
presumptive paraxial mesoderm | 4.43e-13 | 72 |
skin of body | 2.55e-12 | 41 |
epithelial vesicle | 1.28e-11 | 78 |
multilaminar epithelium | 5.20e-11 | 83 |
mesenchyme | 1.66e-10 | 160 |
entire embryonic mesenchyme | 1.66e-10 | 160 |
muscle tissue | 2.56e-10 | 64 |
musculature | 2.56e-10 | 64 |
musculature of body | 2.56e-10 | 64 |
skeletal muscle tissue | 2.97e-10 | 62 |
striated muscle tissue | 2.97e-10 | 62 |
myotome | 2.97e-10 | 62 |
trunk mesenchyme | 1.31e-09 | 122 |
mesoderm | 1.13e-07 | 315 |
mesoderm-derived structure | 1.13e-07 | 315 |
presumptive mesoderm | 1.13e-07 | 315 |
adipose tissue | 1.92e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.83e-07 | 14 |