FFCP PHASE1:Hg19::chr8:124194922..124194957,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84985 | |EntrezGene=84985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28210 | |HGNC=28210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000276699,ENST00000522648_5end | |association_with_transcript=1bp_to_ENST00000276699,ENST00000522648_5end | ||
|cluster_id=chr8:124194922..124194957,+ | |||
|coexpression_cluster_id=C4725 | |coexpression_cluster_id=C4725 | ||
|description=CAGE_peak_1_at_FAM83A_5end | |description=CAGE_peak_1_at_FAM83A_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.28e-36!254;CL:0002076!1.05e-20!43;CL:0000223!1.25e-13!59;CL:0002368!2.36e-12!13;CL:0002159!1.50e-08!13;CL:0002202!2.09e-08!9;CL:0002632!2.09e-08!9;CL:0000076!3.06e-08!62;CL:0002251!4.80e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.28e-36!254;CL:0002076!1.05e-20!43;CL:0000223!1.25e-13!59;CL:0002368!2.36e-12!13;CL:0002159!1.50e-08!13;CL:0002202!2.09e-08!9;CL:0002632!2.09e-08!9;CL:0000076!3.06e-08!62;CL:0002251!4.80e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.73e-16;13!CL:0002076;3.58e-16;42!CL:0002202;4.20e-11;9!CL:0002632;4.20e-11;9!CL:0002159;1.39e-10;14!CL:0002251;4.48e-08;20!CL:0000244;3.06e-07;4!CL:0000731;3.06e-07;4!CL:0000622;5.81e-07;5!CL:0000349;9.02e-07;19 | |ontology_enrichment_celltype_v019=CL:0002368;1.73e-16;13!CL:0002076;3.58e-16;42!CL:0002202;4.20e-11;9!CL:0002632;4.20e-11;9!CL:0002159;1.39e-10;14!CL:0002251;4.48e-08;20!CL:0000244;3.06e-07;4!CL:0000731;3.06e-07;4!CL:0000622;5.81e-07;5!CL:0000349;9.02e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.70e-35,253;CL:0002076,3.90e-21,42;CL:0002368,1.79e-16,13;CL:0000223,5.81e-14,58;CL:0002202,4.29e-11,9;CL:0002632,4.29e-11,9;CL:0002159,1.39e-10,14;CL:0000076,2.75e-09,63;CL:0002251,4.27e-08,20;CL:0000244,3.11e-07,4;CL:0000731,3.11e-07,4;CL:0000622,5.47e-07,5;CL:0000349,8.81e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;2.24e-08;58!UBERON:0008947;6.81e-08;29 | |ontology_enrichment_development_v019=CL:0000223;2.24e-08;58!UBERON:0008947;6.81e-08;29 | ||
|ontology_enrichment_disease=DOID:305!2.05e-18!106;DOID:0050687!3.14e-12!143;DOID:162!5.08e-10!235;DOID:14566!2.44e-09!239;DOID:1749!3.11e-09!14 | |ontology_enrichment_disease=DOID:305!2.05e-18!106;DOID:0050687!3.14e-12!143;DOID:162!5.08e-10!235;DOID:14566!2.44e-09!239;DOID:1749!3.11e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.41e-09;14 | |ontology_enrichment_disease_v019=DOID:1749;1.41e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,8.75e-16,106;DOID:0050687,2.31e-10,143;DOID:1749,1.40e-09,14;DOID:162,7.54e-08,235;DOID:14566,2.23e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.23e-21!169;UBERON:0000925!7.23e-21!169;UBERON:0006595!7.23e-21!169;UBERON:0001004!8.04e-19!72;UBERON:0000065!8.70e-18!53;UBERON:0001007!9.89e-15!155;UBERON:0001555!9.89e-15!155;UBERON:0007026!9.89e-15!155;UBERON:0000072!2.68e-14!46;UBERON:0008947!5.58e-14!38;UBERON:0003258!5.58e-14!38;UBERON:0000077!9.12e-14!130;UBERON:0004921!1.21e-11!129;UBERON:0004185!1.21e-11!129;UBERON:0001041!3.25e-10!98;UBERON:0005156!4.33e-10!59;UBERON:0000990!4.33e-10!59;UBERON:0005153!8.23e-10!37;UBERON:0000464!1.51e-09!104;UBERON:0000161!1.69e-09!35;UBERON:0005911!2.02e-09!82;UBERON:0005631!5.97e-09!14;UBERON:0000158!5.97e-09!14;UBERON:0001557!1.45e-08!19;UBERON:0001048!1.74e-08!168;UBERON:0001737!1.82e-08!9;UBERON:0005157!2.33e-08!51;UBERON:0003133!3.75e-08!48;UBERON:0005178!4.01e-08!34;UBERON:0002224!4.01e-08!34;UBERON:0004175!6.16e-08!25;UBERON:0003100!6.85e-08!41;UBERON:0005181!1.03e-07!35;UBERON:0000466!2.82e-07!126;UBERON:0000064!3.84e-07!219;UBERON:0007196!4.63e-07!14;UBERON:0001558!4.63e-07!14 | |ontology_enrichment_uberon=UBERON:0004119!7.23e-21!169;UBERON:0000925!7.23e-21!169;UBERON:0006595!7.23e-21!169;UBERON:0001004!8.04e-19!72;UBERON:0000065!8.70e-18!53;UBERON:0001007!9.89e-15!155;UBERON:0001555!9.89e-15!155;UBERON:0007026!9.89e-15!155;UBERON:0000072!2.68e-14!46;UBERON:0008947!5.58e-14!38;UBERON:0003258!5.58e-14!38;UBERON:0000077!9.12e-14!130;UBERON:0004921!1.21e-11!129;UBERON:0004185!1.21e-11!129;UBERON:0001041!3.25e-10!98;UBERON:0005156!4.33e-10!59;UBERON:0000990!4.33e-10!59;UBERON:0005153!8.23e-10!37;UBERON:0000464!1.51e-09!104;UBERON:0000161!1.69e-09!35;UBERON:0005911!2.02e-09!82;UBERON:0005631!5.97e-09!14;UBERON:0000158!5.97e-09!14;UBERON:0001557!1.45e-08!19;UBERON:0001048!1.74e-08!168;UBERON:0001737!1.82e-08!9;UBERON:0005157!2.33e-08!51;UBERON:0003133!3.75e-08!48;UBERON:0005178!4.01e-08!34;UBERON:0002224!4.01e-08!34;UBERON:0004175!6.16e-08!25;UBERON:0003100!6.85e-08!41;UBERON:0005181!1.03e-07!35;UBERON:0000466!2.82e-07!126;UBERON:0000064!3.84e-07!219;UBERON:0007196!4.63e-07!14;UBERON:0001558!4.63e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;7.05e-12;44!UBERON:0000072;7.77e-12;37!UBERON:0001737;6.05e-11;9!UBERON:0001557;6.05e-11;9!UBERON:0001004;2.76e-10;65!UBERON:0007196;8.05e-09;15!UBERON:0001558;8.05e-09;15!UBERON:0005631;1.08e-08;10!UBERON:0000158;1.08e-08;10!UBERON:0000365;2.30e-08;5!UBERON:0000486;7.64e-08;12!UBERON:0004807;2.15e-07;22!UBERON:0005911;6.94e-07;36!UBERON:0000161;7.18e-07;19!UBERON:0000166;7.18e-07;19!UBERON:0005910;7.55e-07;6!UBERON:0002294;7.90e-07;7!UBERON:0001173;7.90e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000065;7.05e-12;44!UBERON:0000072;7.77e-12;37!UBERON:0001737;6.05e-11;9!UBERON:0001557;6.05e-11;9!UBERON:0001004;2.76e-10;65!UBERON:0007196;8.05e-09;15!UBERON:0001558;8.05e-09;15!UBERON:0005631;1.08e-08;10!UBERON:0000158;1.08e-08;10!UBERON:0000365;2.30e-08;5!UBERON:0000486;7.64e-08;12!UBERON:0004807;2.15e-07;22!UBERON:0005911;6.94e-07;36!UBERON:0000161;7.18e-07;19!UBERON:0000166;7.18e-07;19!UBERON:0005910;7.55e-07;6!UBERON:0002294;7.90e-07;7!UBERON:0001173;7.90e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.06e-21,160;UBERON:0000925,5.06e-21,160;UBERON:0006595,5.06e-21,160;UBERON:0001004,7.62e-20,74;UBERON:0000065,3.59e-17,54;UBERON:0000072,1.11e-14,47;UBERON:0008947,6.80e-14,38;UBERON:0003258,6.80e-14,38;UBERON:0001007,1.00e-13,145;UBERON:0001555,1.00e-13,145;UBERON:0007026,1.00e-13,145;UBERON:0005631,5.61e-12,14;UBERON:0000158,5.61e-12,14;UBERON:0001737,5.78e-11,9;UBERON:0001041,8.33e-11,87;UBERON:0004921,1.97e-10,118;UBERON:0000161,2.09e-09,36;UBERON:0001557,2.87e-09,19;UBERON:0007196,7.36e-09,15;UBERON:0001558,7.36e-09,15;UBERON:0000365,2.36e-08,5;UBERON:0003124,4.22e-08,7;UBERON:0000166,6.13e-08,22;UBERON:0005178,2.38e-07,34;UBERON:0002224,2.38e-07,34;UBERON:0003102,3.73e-07,99;UBERON:0005181,5.06e-07,35;UBERON:0005910,7.69e-07,6;UBERON:0004175,7.91e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,5.89761447603621,21.6318362071453,26.649847399881,34.8172411261559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,97.4586497947663,85.8436868518013,65.0767057893546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0.261958150995425,128.96053205556,95.6623862383828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,46.6620635792512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.2954277133809,53.4582396358036,75.716413182697,0,0,0,0,0,0,0,0,0,0,0,8.87301000298829,6.74338760312407,10.3634742849897,6.72793233667603,10.0224544282507,9.49082476444386,9.70785418753184,11.3808449772701,13.8508976500701,0,0,0,0,0,0,0,0,0.491953754172454,6.17644117074692,83.9589683375985,84.3013149432147,118.523658473313,34.9058438247657,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,8.43604505880993,41.1556214087206,39.271701936141,12.3590761329931,15.9848666182679,31.8207623707125,0,0,0,0,0,0.126995788584338,0,0,3.4214489204541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,1.89948683245908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,71.1797969576661,25.3222719573715,0,0,0.131124414959424,0.902399225814824,0.924184045252977,0,0,0.316654886678627,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0,3.28889814968902,4.44440266742331,0,0,0,0.206082023295445,0,0,90.1596894653991,56.5552414051773,0,0,0,0,0,0,0,0.0852266274161009,0,61.9818432603668,45.3568558981651,28.840473023776,53.1078349491637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0.379473173765715,0,60.138820453445,89.1502026462597,70.7791401598597,0.376575203107117,85.2400637889035,52.2261574569639,59.8630707274512,29.4045952264908,0,0,0,0,0,0,0.540031437238115,0,0,0,59.0546920514286,0,0,0,0,0,0,0,0,0,0,0,7.51903431270201,0,0,0,0,0,0,0,0,0,0,35.6953456948366,0.270455678475983,0,0,0,0,0,0,0,57.0599318523079,12.4725165949708,63.2751046324418,0,0,0.556543525114529,0,0,0,0,0,0,0,0,12.1322274048891,22.914710358478,0,1.38100767891707,0,0,0,0,0,1.04171104434093,0.787139999965761,0,0.1137934482855,22.6285748760562,0.945550727071745,0,0,0,0,0,0,0,0,0,12.4189848411649,22.8654940616909,7.38722481636452,0,0,0,0.108647371922008,18.5020672644513,6.22863635132664,13.8589041764845,0,0,2.82559859230266,28.8762445589991,24.8999418583529,22.8237358287146,23.529462857799,4.76809736941136,0,4.57051862845614,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,8.21791399514777,0,7.10251925128903,0,0.30607276163049,0,0,0,0,0,0,1.19472429772959,0.853828638089378,0,0.347119476670262,63.1071039348592,73.6520887670206,1.7472666824203,7.22341336380789,28.8333867241474,51.4548792286746,33.1746446494965,21.9195177263828,0,9.49119111278236,0.137041924646751,0.397429223405979,0,1.95551382734803,29.8190811335705,1.06726497369676,0.999048047910651,0,0,0,1.87271237384595,0,63.401695311918,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,19.4552118807574,0.157611414598396,0.0524545881349981,0,0.537862017998534,10.7472510498889,0.714695326373367,0,0,0,0,0,0,45.8897190988805,0,0.113312091520126,0,0,0,0,2.39521573038061,6.34333520085005,0.213574825135389,0.314408610199332,0,0,0,0,41.4921817550618,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0.406870733204662,0,1.93339002676479,0,0,0,0,0,0,0,4.50327341887344,8.09082305092156,0,0,0.489473409012935,0,43.8498054968581,1.09642024789354,113.611120843202,2.31496845925098,1.18259708457151,0,0,0,0,0,0,0,0,0,38.0361822045529,0,0,0,0,0,21.9610827119528,52.2544898427697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.3702242903487,0,17.4257168595595,11.8991436134848,0,0.690359926060101,0,0.526472298444801,0,0,0,18.1786828436207,66.6830948838874,0,0,0,0,0,0,2.48105589194647,0,10.4765190664468,0,0,0,0,2.12885688390333,0,0,0,0,86.5178915270647,0.222462803784138,0.78493092850514,0,0,0,0,0,0,0,0,0,0,2.69381013411948,2.90221411059715,1.38251932362818,2.15113679410139,0,0,9.31451510420044,1.3746412112643,1.86123831398592,0.955538938977433,0,0,5.9739783241312,0,0,0,4.37139893753226,0,0,0,0,0,0,1.62065732026684,0,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,0,31.6040471332014,44.4647538361772,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,1.06886962106224,0.459474497674225,0,0.0757786982182394,0,0,0,7.24995538463335,0,0.0645889098360061,0.31037357147929,1.12131862580613,0.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| ||
|short_description=p1@FAM83A | |short_description=p1@FAM83A | ||
}} | }} |
Latest revision as of 00:22, 16 September 2015
Short description: | p1@FAM83A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM83A_5end |
Coexpression cluster: | C4725_Corneal_Keratinocyte_mesothelioma_Bronchial_Urothelial_papillotubular_Gingival |
Association with transcript: | 1bp_to_ENST00000276699, ENST00000522648_5end |
EntrezGene: | FAM83A |
HGNC: | 28210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.70e-35 | 253 |
endo-epithelial cell | 3.90e-21 | 42 |
respiratory epithelial cell | 1.79e-16 | 13 |
endodermal cell | 5.81e-14 | 58 |
epithelial cell of tracheobronchial tree | 4.29e-11 | 9 |
epithelial cell of lower respiratory tract | 4.29e-11 | 9 |
general ecto-epithelial cell | 1.39e-10 | 14 |
squamous epithelial cell | 2.75e-09 | 63 |
epithelial cell of alimentary canal | 4.27e-08 | 20 |
transitional epithelial cell | 3.11e-07 | 4 |
urothelial cell | 3.11e-07 | 4 |
acinar cell | 5.47e-07 | 5 |
extraembryonic cell | 8.81e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.06e-21 | 160 |
endoderm | 5.06e-21 | 160 |
presumptive endoderm | 5.06e-21 | 160 |
respiratory system | 7.62e-20 | 74 |
respiratory tract | 3.59e-17 | 54 |
segment of respiratory tract | 1.11e-14 | 47 |
respiratory primordium | 6.80e-14 | 38 |
endoderm of foregut | 6.80e-14 | 38 |
digestive system | 1.00e-13 | 145 |
digestive tract | 1.00e-13 | 145 |
primitive gut | 1.00e-13 | 145 |
extraembryonic membrane | 5.61e-12 | 14 |
membranous layer | 5.61e-12 | 14 |
larynx | 5.78e-11 | 9 |
foregut | 8.33e-11 | 87 |
subdivision of digestive tract | 1.97e-10 | 118 |
orifice | 2.09e-09 | 36 |
upper respiratory tract | 2.87e-09 | 19 |
tracheobronchial tree | 7.36e-09 | 15 |
lower respiratory tract | 7.36e-09 | 15 |
urothelium | 2.36e-08 | 5 |
chorion | 4.22e-08 | 7 |
oral opening | 6.13e-08 | 22 |
thoracic cavity element | 2.38e-07 | 34 |
thoracic cavity | 2.38e-07 | 34 |
surface structure | 3.73e-07 | 99 |
thoracic segment organ | 5.06e-07 | 35 |
transitional epithelium | 7.69e-07 | 6 |
internal genitalia | 7.91e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.75e-16 | 106 |
cell type cancer | 2.31e-10 | 143 |
squamous cell carcinoma | 1.40e-09 | 14 |
cancer | 7.54e-08 | 235 |
disease of cellular proliferation | 2.23e-07 | 239 |