FFCP PHASE1:Hg19::chr7:120498357..120498395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23554 | |EntrezGene=23554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21641 | |HGNC=21641 | ||
|TSSclassifier=strong | |||
|UniProt=O95859 | |UniProt=O95859 | ||
|association_with_transcript=0bp_to_ENST00000415871_5end | |association_with_transcript=0bp_to_ENST00000415871_5end | ||
|cluster_id=chr7:120498357..120498395,- | |||
|description=CAGE_peak_3_at_TSPAN12_5end | |description=CAGE_peak_3_at_TSPAN12_5end | ||
|id=chr7:120498357..120498395,- | |id=chr7:120498357..120498395,- | ||
|ontology_enrichment_celltype=CL:0000066!2.78e-13!254;CL:0002139!2.14e-09!24 | |ontology_enrichment_celltype=CL:0000066!2.78e-13!254;CL:0002139!2.14e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0002543;3.53e-08;6!CL:0002139;4.74e-08;24 | |ontology_enrichment_celltype_v019=CL:0002543;3.53e-08;6!CL:0002139;4.74e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.76e-09,253;CL:0002543,2.18e-08,6;CL:0002139,3.09e-08,24;CL:0000115,7.01e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.70e-16;29!UBERON:0006595;4.13e-12;86!UBERON:0003104;1.69e-07;31!UBERON:0001041;9.74e-07;30 | |ontology_enrichment_development_v019=UBERON:0008947;4.70e-16;29!UBERON:0006595;4.13e-12;86!UBERON:0003104;1.69e-07;31!UBERON:0001041;9.74e-07;30 | ||
|ontology_enrichment_disease=DOID:305!1.31e-14!106;DOID:0050687!7.05e-11!143 | |ontology_enrichment_disease=DOID:305!1.31e-14!106;DOID:0050687!7.05e-11!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.07e-09,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005409;2.73e-14;22!UBERON:0004921;2.80e-13;33!UBERON:0000160;1.44e-12;17!UBERON:0001737;2.66e-12;9!UBERON:0001557;2.66e-12;9!UBERON:0000065;4.18e-08;44!UBERON:0000059;5.73e-08;11!UBERON:0000072;1.21e-07;37!UBERON:0004907;2.31e-07;5!UBERON:0005172;8.97e-07;52!UBERON:0005173;8.97e-07;52!UBERON:0001638;9.15e-07;9!UBERON:0003920;9.15e-07;9!UBERON:0004582;9.15e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.73e-14;22!UBERON:0004921;2.80e-13;33!UBERON:0000160;1.44e-12;17!UBERON:0001737;2.66e-12;9!UBERON:0001557;2.66e-12;9!UBERON:0000065;4.18e-08;44!UBERON:0000059;5.73e-08;11!UBERON:0000072;1.21e-07;37!UBERON:0004907;2.31e-07;5!UBERON:0005172;8.97e-07;52!UBERON:0005173;8.97e-07;52!UBERON:0001638;9.15e-07;9!UBERON:0003920;9.15e-07;9!UBERON:0004582;9.15e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.25e-29,118;UBERON:0001007,2.36e-24,145;UBERON:0001555,2.36e-24,145;UBERON:0007026,2.36e-24,145;UBERON:0004119,3.72e-22,160;UBERON:0000925,3.72e-22,160;UBERON:0006595,3.72e-22,160;UBERON:0001041,5.47e-17,87;UBERON:0005409,1.29e-13,25;UBERON:0000160,9.22e-13,17;UBERON:0001737,1.80e-12,9;UBERON:0008947,4.76e-12,38;UBERON:0003258,4.76e-12,38;UBERON:0005177,9.03e-12,101;UBERON:0005172,6.76e-11,54;UBERON:0005173,6.76e-11,54;UBERON:0011216,6.43e-10,223;UBERON:0000065,3.69e-09,54;UBERON:0002417,4.20e-09,60;UBERON:0000916,4.20e-09,60;UBERON:0005911,8.58e-09,82;UBERON:0009569,8.98e-09,112;UBERON:0001557,2.59e-08,19;UBERON:0000059,3.61e-08,11;UBERON:0001004,4.91e-08,74;UBERON:0000072,6.25e-08,47;UBERON:0004907,1.28e-07,5;UBERON:0007023,2.12e-07,114;UBERON:0001638,5.61e-07,9;UBERON:0003920,5.61e-07,9;UBERON:0004582,5.61e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,1.48519623552056,0.994192127183747,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0.764134057479513,0.164201178899891,0.472264687882075,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.44846518960824,0,0,0.378139268656271,0.221729397462564,0,5.76307932189936,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0.694281003215189,2.26123176769604,0.419499436209906,0.550236083880135,0.208994966536811,2.58416759169329,2.13459757612026,1.67360306382335,0,2.28081631715554,1.46437234528902,0.735326160691737,0,2.94689103337463,3.14341121676638,1.68917220724983,7.66583187329416,2.84779697870439,1.28241220751285,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,4.25904480143438,3.87744787179634,4.09718750801919,4.52205288202815,2.61455332910887,2.60997681022206,4.98875840192608,4.31687223275761,1.53898862778556,0,0,0,0,15.2106041786197,4.91413608338813,8.86184860022106,0,6.02643348861256,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,1.58803092537181,0.925971025153221,3.61482889245737,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,2.28764789853036,0,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,2.00068208423871,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.116210378459959,2.53804844142407,0.40101294060657,0,0.114814448164607,0,0.393373244878272,0.451199612907412,1.23224539367064,1.56869953835371,0,1.16106791782163,1.13733384070897,0.850468526382578,1.51141141271498,3.08454505380579,0.812839312631559,3.01013864312912,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0,0,0,6.4915837338065,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0,0.0982490410131212,0,0.709522128141196,0.422215270595328,0,0,0,0.0962221127255121,0,1.08890984861323,9.88509908156181,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61421621224659,1.17206543417515,20.8740097409163,0,0,0.71623345421307,1.48482340416319,0.921482106297696,0.994147647766298,0.281338832821026,0.333926115068718,0,4.43363357068786,2.19172787076177,4.14425873296722,20.9104180719049,0,0,0,0.808815160325942,1.61119057208048,0,2.17015492401254,0,0,0,0,0,0,0.262379999988587,1.44999915086959,1.365521379426,2.79679015322043,0.236387681767936,0,2.04123229368278,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0,0,1.41620002574687,0.697118721393016,3.00106008164809,0.113942055847001,0.23056390438806,0,0,0.638002319463839,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,1.69623685720729,4.32777279484182,6.96683351754953,16.1877343041111,6.72133159426988,0,0,0,0.539209063845416,0.802577647298789,0.468528891450678,0,0.19566461893209,0,8.68085686268659,29.0377718516793,0,1.76922422959766,0.901940516486955,11.4057010536972,0,0,0.313932918407225,0,5.69219092059585,0,0,0,0,2.44617335538842,0,0.580537987734511,0.292357268344742,0.492692742319255,0.775912131907355,0.0882561266915003,1.35588444468319,0.274083849293502,0,0.316553979779393,1.36885967914362,0.64127056201227,10.2457437474889,0.19980960958213,27.9535409278966,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,2.06244381610515,0,2.59582700648688,0.429226048136571,0.446342914883745,0.940568614814168,0,2.32991899054908,0,0,0,1.18112977817699,0.76205998859206,0,0,0.321506296930038,0.275078873194468,0,0,0,0.121499113316049,0,13.0817474116669,16.8379227913344,0,7.70935559131233,0,0.714695326373367,0,0,0,0,0,0,0,0.340776043570843,0,6.44829828183563,6.62534444561107,0,0,0.171086837884329,0,9.93122936879561,10.375484136578,11.5986935497215,0,0,0,0,1.63205341010842,0.2506898940227,0.306345576763462,0,1.41348686625211,0,0,0,0,0.443716206147409,0.18628920882415,0.138348634936231,0.37494122388632,0,0.285465333544967,0,0,0,0.149254802886874,0,0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| ||
|short_description=p3@TSPAN12 | |short_description=p3@TSPAN12 | ||
}} | }} |
Latest revision as of 21:44, 15 September 2015
Short description: | p3@TSPAN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSPAN12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000415871_5end |
EntrezGene: | TSPAN12 |
HGNC: | 21641 |
UniProt: | O95859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.76e-09 | 253 |
vein endothelial cell | 2.18e-08 | 6 |
endothelial cell of vascular tree | 3.09e-08 | 24 |
endothelial cell | 7.01e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.25e-29 | 118 |
digestive system | 2.36e-24 | 145 |
digestive tract | 2.36e-24 | 145 |
primitive gut | 2.36e-24 | 145 |
endoderm-derived structure | 3.72e-22 | 160 |
endoderm | 3.72e-22 | 160 |
presumptive endoderm | 3.72e-22 | 160 |
foregut | 5.47e-17 | 87 |
gastrointestinal system | 1.29e-13 | 25 |
intestine | 9.22e-13 | 17 |
larynx | 1.80e-12 | 9 |
respiratory primordium | 4.76e-12 | 38 |
endoderm of foregut | 4.76e-12 | 38 |
trunk region element | 9.03e-12 | 101 |
abdomen element | 6.76e-11 | 54 |
abdominal segment element | 6.76e-11 | 54 |
organ system subdivision | 6.43e-10 | 223 |
respiratory tract | 3.69e-09 | 54 |
abdominal segment of trunk | 4.20e-09 | 60 |
abdomen | 4.20e-09 | 60 |
endo-epithelium | 8.58e-09 | 82 |
subdivision of trunk | 8.98e-09 | 112 |
upper respiratory tract | 2.59e-08 | 19 |
large intestine | 3.61e-08 | 11 |
respiratory system | 4.91e-08 | 74 |
segment of respiratory tract | 6.25e-08 | 47 |
lower digestive tract | 1.28e-07 | 5 |
adult organism | 2.12e-07 | 114 |
vein | 5.61e-07 | 9 |
venous blood vessel | 5.61e-07 | 9 |
venous system | 5.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.07e-09 | 106 |