FFCP PHASE1:Hg19::chr9:16727020..16727033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:16727020..16727033,+ | |||
|description=CAGE_peak_at_chr9:16727020..16727033,+ | |description=CAGE_peak_at_chr9:16727020..16727033,+ | ||
|id=chr9:16727020..16727033,+ | |id=chr9:16727020..16727033,+ | ||
|ontology_enrichment_celltype=CL:0000183!4.77e-28!59;CL:0000680!8.51e-28!57;CL:0000056!8.51e-28!57;CL:0000355!8.51e-28!57;CL:0000187!7.84e-26!54;CL:0000393!4.06e-24!60;CL:0000211!4.06e-24!60;CL:0000055!5.34e-24!180;CL:0000192!3.89e-18!42;CL:0000514!3.89e-18!42;CL:0000222!7.36e-15!119;CL:0000359!9.39e-14!32;CL:0002494!4.58e-09!16;CL:0000048!2.01e-07!430;CL:0002539!4.86e-07!10;CL:0000723!6.25e-07!436;CL:0000034!7.46e-07!444;CL:0000057!7.67e-07!75 | |ontology_enrichment_celltype=CL:0000183!4.77e-28!59;CL:0000680!8.51e-28!57;CL:0000056!8.51e-28!57;CL:0000355!8.51e-28!57;CL:0000187!7.84e-26!54;CL:0000393!4.06e-24!60;CL:0000211!4.06e-24!60;CL:0000055!5.34e-24!180;CL:0000192!3.89e-18!42;CL:0000514!3.89e-18!42;CL:0000222!7.36e-15!119;CL:0000359!9.39e-14!32;CL:0002494!4.58e-09!16;CL:0000048!2.01e-07!430;CL:0002539!4.86e-07!10;CL:0000723!6.25e-07!436;CL:0000034!7.46e-07!444;CL:0000057!7.67e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000746;3.68e-09;3!CL:0000632;6.14e-09;3!CL:0000077;1.08e-07;19!CL:0000737;4.57e-07;4!CL:0002591;5.77e-07;1!CL:0002599;5.77e-07;1 | |ontology_enrichment_celltype_v019=CL:0000746;3.68e-09;3!CL:0000632;6.14e-09;3!CL:0000077;1.08e-07;19!CL:0000737;4.57e-07;4!CL:0002591;5.77e-07;1!CL:0002599;5.77e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.54e-09,3;CL:0000513,3.54e-09,3;CL:0000632,5.92e-09,3;CL:0000222,6.19e-09,121;CL:0000187,1.02e-08,55;CL:0000680,3.56e-08,58;CL:0000056,3.56e-08,58;CL:0000355,3.56e-08,58;CL:0000393,1.09e-07,61;CL:0000211,1.09e-07,61;CL:0000077,1.14e-07,19;CL:0000192,2.64e-07,43;CL:0000514,2.64e-07,43;CL:0000737,4.44e-07,4;CL:0002599,4.57e-07,1;CL:0002591,8.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000513;3.68e-09;3 | |ontology_enrichment_development_v019=CL:0000513;3.68e-09;3 | ||
|ontology_enrichment_disease=DOID:2394!2.51e-08!14 | |ontology_enrichment_disease=DOID:2394!2.51e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.06e-10,122;UBERON:0007503,8.60e-10,78;UBERON:0003104,8.26e-08,160;UBERON:0009142,8.26e-08,160;UBERON:0002329,9.28e-08,71;UBERON:0003059,9.28e-08,71;UBERON:0007282,9.28e-08,71;UBERON:0004290,9.28e-08,71;UBERON:0009618,9.28e-08,71;UBERON:0003077,1.27e-07,72;UBERON:0007285,1.27e-07,72;UBERON:0001134,1.55e-07,62;UBERON:0002036,1.55e-07,62;UBERON:0003082,1.55e-07,62;UBERON:0007524,1.71e-07,73;UBERON:0002385,3.01e-07,64;UBERON:0001015,3.01e-07,64;UBERON:0000383,3.01e-07,64 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.737201809504527,0,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,3.35350429851818,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,1.72131935057184,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0.624320153660641,0.570471821544449,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,1.82032272387605,0,0,0,0,0,0,0,0.340296549480063,0,0,0.423863802319124,0.600182192168805,0,0,0,0.337552664482532,0.292311015483596,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,2.057870056657,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0,0,0.514414748524284,0,0,1.28680194292333,1.08524321078289,0,0,0.355391948742546,0,6.63166629531089,0.871533458600294,4.69873058555668,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.614014698904518,0.413509717453592,0.966782203814463,0.725083469571143,0.170453254832202,0.178064071293475,0,0,0,0,0,0.62962469366128,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,0,0.762520775695299,1.02359116524534,0.42793898803392,1.59101623962968,0,0.179872457583315,0,0.353437207037059,0.202182481573316,3.17020642346017,0.421258456238981,1.46290121726877,0.487426979262569,0,0.272999822815972,0.141405431953713,1.13008116620243,1.65409603063837,1.32687795048244,0.438450885253763,0,1.31178950409327,0,0,0,0.286822704408103,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0.640358984218058,0,0,0,0.514784993585894,0,0,0,0,0.209205692624666,0,1.44475294950759,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.197611631897944,0,0,1.63205341010842,0.2506898940227,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,0.453692771289717,0.466311601748341,0.443565449968902,0.477890301491107,0.449803112163605,0.931577741257556,0.414706207840855,0.265841714557995,0,4.80824348791099,0.380805212168795,0.406870733204662,0.363697318405119,2.04080058380728,2.32016879939247,0,0,0,0,0,0.192619830407303,2.14441591374926,0,0.226705925512272,0,0,0,1.23520578864389,3.28926074368061,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0.371995018166751,0,0,0,0,0,0,0,0,0,0.454672189309436,0.803892390468535,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.0717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| ||
|short_description=p@chr9:16727020..16727033,+ | |short_description=p@chr9:16727020..16727033,+ | ||
}} | }} |
Latest revision as of 00:55, 1 August 2015
Short description: | p@chr9:16727020..16727033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:16727020..16727033, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.54e-09 | 3 |
cardiac muscle myoblast | 3.54e-09 | 3 |
hepatic stellate cell | 5.92e-09 | 3 |
mesodermal cell | 6.19e-09 | 121 |
muscle cell | 1.02e-08 | 55 |
muscle precursor cell | 3.56e-08 | 58 |
myoblast | 3.56e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.56e-08 | 58 |
electrically responsive cell | 1.09e-07 | 61 |
electrically active cell | 1.09e-07 | 61 |
mesothelial cell | 1.14e-07 | 19 |
smooth muscle cell | 2.64e-07 | 43 |
smooth muscle myoblast | 2.64e-07 | 43 |
striated muscle cell | 4.44e-07 | 4 |
smooth muscle cell of the esophagus | 4.57e-07 | 1 |
smooth muscle cell of the pulmonary artery | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 5.06e-10 | 122 |
epithelial vesicle | 8.60e-10 | 78 |
mesenchyme | 8.26e-08 | 160 |
entire embryonic mesenchyme | 8.26e-08 | 160 |
somite | 9.28e-08 | 71 |
presomitic mesoderm | 9.28e-08 | 71 |
presumptive segmental plate | 9.28e-08 | 71 |
dermomyotome | 9.28e-08 | 71 |
trunk paraxial mesoderm | 9.28e-08 | 71 |
paraxial mesoderm | 1.27e-07 | 72 |
presumptive paraxial mesoderm | 1.27e-07 | 72 |
skeletal muscle tissue | 1.55e-07 | 62 |
striated muscle tissue | 1.55e-07 | 62 |
myotome | 1.55e-07 | 62 |
dense mesenchyme tissue | 1.71e-07 | 73 |
muscle tissue | 3.01e-07 | 64 |
musculature | 3.01e-07 | 64 |
musculature of body | 3.01e-07 | 64 |