FFCP PHASE1:Hg19::chr7:94044577..94044586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94044577..94044586,+ | |||
|description=CAGE_peak_at_chr7:94044577..94044586,+ | |description=CAGE_peak_at_chr7:94044577..94044586,+ | ||
|id=chr7:94044577..94044586,+ | |id=chr7:94044577..94044586,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.80e-59!180;CL:0000057!2.31e-42!75;CL:0000048!1.13e-25!430;CL:0000723!9.23e-25!436;CL:0000034!1.39e-23!444;CL:0000680!2.72e-20!57;CL:0000056!2.72e-20!57;CL:0000355!2.72e-20!57;CL:0000187!1.02e-19!54;CL:0002620!6.45e-19!23;CL:0000183!1.87e-18!59;CL:0002371!1.04e-16!591;CL:0000393!1.38e-16!60;CL:0000211!1.38e-16!60;CL:0000192!1.00e-15!42;CL:0000514!1.00e-15!42;CL:0000144!5.47e-15!625;CL:0002320!1.65e-12!365;CL:0000134!3.11e-11!358;CL:0000548!6.11e-11!679;CL:0000004!6.11e-11!679;CL:0000255!6.11e-11!679;CL:0000012!1.07e-10!682;CL:0000219!4.73e-10!390;CL:0000499!1.30e-09!27;CL:0000359!6.02e-09!32;CL:0000327!4.42e-08!14;CL:0000003!1.13e-07!722 | |ontology_enrichment_celltype=CL:0000055!4.80e-59!180;CL:0000057!2.31e-42!75;CL:0000048!1.13e-25!430;CL:0000723!9.23e-25!436;CL:0000034!1.39e-23!444;CL:0000680!2.72e-20!57;CL:0000056!2.72e-20!57;CL:0000355!2.72e-20!57;CL:0000187!1.02e-19!54;CL:0002620!6.45e-19!23;CL:0000183!1.87e-18!59;CL:0002371!1.04e-16!591;CL:0000393!1.38e-16!60;CL:0000211!1.38e-16!60;CL:0000192!1.00e-15!42;CL:0000514!1.00e-15!42;CL:0000144!5.47e-15!625;CL:0002320!1.65e-12!365;CL:0000134!3.11e-11!358;CL:0000548!6.11e-11!679;CL:0000004!6.11e-11!679;CL:0000255!6.11e-11!679;CL:0000012!1.07e-10!682;CL:0000219!4.73e-10!390;CL:0000499!1.30e-09!27;CL:0000359!6.02e-09!32;CL:0000327!4.42e-08!14;CL:0000003!1.13e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-21;23!CL:0002596;7.62e-09;2!CL:0000327;1.70e-08;15!CL:0002363;2.14e-08;2!CL:0000057;4.38e-08;73!CL:0000499;1.99e-07;28!CL:0000153;6.26e-07;9!CL:0000447;6.26e-07;9 | |ontology_enrichment_celltype_v019=CL:0002620;1.11e-21;23!CL:0002596;7.62e-09;2!CL:0000327;1.70e-08;15!CL:0002363;2.14e-08;2!CL:0000057;4.38e-08;73!CL:0000499;1.99e-07;28!CL:0000153;6.26e-07;9!CL:0000447;6.26e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.76e-22,23;CL:0000057,1.15e-20,76;CL:0000048,5.62e-11,427;CL:0000723,1.12e-10,433;CL:0000034,2.71e-10,441;CL:0002596,5.01e-09,2;CL:0000187,7.08e-09,55;CL:0000327,2.49e-08,15;CL:0000680,2.83e-08,58;CL:0000056,2.83e-08,58;CL:0000355,2.83e-08,58;CL:0002363,3.26e-08,2;CL:0000008,3.26e-08,2;CL:0000393,9.83e-08,61;CL:0000211,9.83e-08,61;CL:0000499,2.67e-07,28;CL:0000192,5.11e-07,43;CL:0000514,5.11e-07,43;CL:0000153,7.16e-07,9;CL:0000447,7.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000008;2.14e-08;2 | |ontology_enrichment_development_v019=CL:0000008;2.14e-08;2 | ||
|ontology_enrichment_disease=DOID:17!1.46e-07!5;DOID:450!1.46e-07!5;DOID:66!1.46e-07!5;DOID:423!1.46e-07!5;DOID:0080000!1.46e-07!5;DOID:11722!1.46e-07!5 | |ontology_enrichment_disease=DOID:17!1.46e-07!5;DOID:450!1.46e-07!5;DOID:66!1.46e-07!5;DOID:423!1.46e-07!5;DOID:0080000!1.46e-07!5;DOID:11722!1.46e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;8.42e-13;5!DOID:450;8.42e-13;5!DOID:66;8.42e-13;5!DOID:423;8.42e-13;5!DOID:0080000;8.42e-13;5!DOID:11722;8.42e-13;5 | |ontology_enrichment_disease_v019=DOID:17;8.42e-13;5!DOID:450;8.42e-13;5!DOID:66;8.42e-13;5!DOID:423;8.42e-13;5!DOID:0080000;8.42e-13;5!DOID:11722;8.42e-13;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.11e-13,5;DOID:450,4.11e-13,5;DOID:66,4.11e-13,5;DOID:423,4.11e-13,5;DOID:0080000,4.11e-13,5;DOID:11722,4.11e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.76e-24!83;UBERON:0002329!2.76e-24!83;UBERON:0003077!2.76e-24!83;UBERON:0003059!2.76e-24!83;UBERON:0007282!2.76e-24!83;UBERON:0009618!2.76e-24!83;UBERON:0007285!2.76e-24!83;UBERON:0004290!5.13e-21!70;UBERON:0001134!1.74e-19!61;UBERON:0002036!1.74e-19!61;UBERON:0003082!1.74e-19!61;UBERON:0002385!1.80e-18!63;UBERON:0001015!1.80e-18!63;UBERON:0000383!1.80e-18!63;UBERON:0000486!4.24e-17!82;UBERON:0003102!2.24e-13!95;UBERON:0002384!6.57e-12!375;UBERON:0002097!9.31e-12!40;UBERON:0002199!1.39e-11!45;UBERON:0002416!1.39e-11!45;UBERON:0005256!2.12e-11!143;UBERON:0000475!5.67e-08!365;UBERON:0002049!8.20e-07!79;UBERON:0007798!8.20e-07!79;UBERON:0001637!9.60e-07!42;UBERON:0003509!9.60e-07!42;UBERON:0004572!9.60e-07!42;UBERON:0002204!9.80e-07!167 | |ontology_enrichment_uberon=UBERON:0000914!2.76e-24!83;UBERON:0002329!2.76e-24!83;UBERON:0003077!2.76e-24!83;UBERON:0003059!2.76e-24!83;UBERON:0007282!2.76e-24!83;UBERON:0009618!2.76e-24!83;UBERON:0007285!2.76e-24!83;UBERON:0004290!5.13e-21!70;UBERON:0001134!1.74e-19!61;UBERON:0002036!1.74e-19!61;UBERON:0003082!1.74e-19!61;UBERON:0002385!1.80e-18!63;UBERON:0001015!1.80e-18!63;UBERON:0000383!1.80e-18!63;UBERON:0000486!4.24e-17!82;UBERON:0003102!2.24e-13!95;UBERON:0002384!6.57e-12!375;UBERON:0002097!9.31e-12!40;UBERON:0002199!1.39e-11!45;UBERON:0002416!1.39e-11!45;UBERON:0005256!2.12e-11!143;UBERON:0000475!5.67e-08!365;UBERON:0002049!8.20e-07!79;UBERON:0007798!8.20e-07!79;UBERON:0001637!9.60e-07!42;UBERON:0003509!9.60e-07!42;UBERON:0004572!9.60e-07!42;UBERON:0002204!9.80e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.25e-11;41!UBERON:0003102;9.39e-10;50!UBERON:0002199;9.42e-10;46!UBERON:0002416;9.42e-10;46!UBERON:0005396;7.62e-09;2!UBERON:0003566;2.14e-08;2!UBERON:0001777;2.14e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.25e-11;41!UBERON:0003102;9.39e-10;50!UBERON:0002199;9.42e-10;46!UBERON:0002416;9.42e-10;46!UBERON:0005396;7.62e-09;2!UBERON:0003566;2.14e-08;2!UBERON:0001777;2.14e-08;2 | ||
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|short_description=p@chr7:94044577..94044586,+ | |short_description=p@chr7:94044577..94044586,+ | ||
}} | }} |
Latest revision as of 12:43, 31 July 2015
Short description: | p@chr7:94044577..94044586, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94044577..94044586, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.76e-22 | 23 |
fibroblast | 1.15e-20 | 76 |
multi fate stem cell | 5.62e-11 | 427 |
somatic stem cell | 1.12e-10 | 433 |
stem cell | 2.71e-10 | 441 |
smooth muscle cell of the carotid artery | 5.01e-09 | 2 |
muscle cell | 7.08e-09 | 55 |
extracellular matrix secreting cell | 2.49e-08 | 15 |
muscle precursor cell | 2.83e-08 | 58 |
myoblast | 2.83e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.83e-08 | 58 |
keratocyte | 3.26e-08 | 2 |
migratory cranial neural crest cell | 3.26e-08 | 2 |
electrically responsive cell | 9.83e-08 | 61 |
electrically active cell | 9.83e-08 | 61 |
stromal cell | 2.67e-07 | 28 |
smooth muscle cell | 5.11e-07 | 43 |
smooth muscle myoblast | 5.11e-07 | 43 |
GAG secreting cell | 7.16e-07 | 9 |
carbohydrate secreting cell | 7.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.13e-15 | 41 |
integument | 1.30e-13 | 46 |
integumental system | 1.30e-13 | 46 |
surface structure | 1.84e-09 | 99 |
carotid artery segment | 5.01e-09 | 2 |
head connective tissue | 3.26e-08 | 2 |
substantia propria of cornea | 3.26e-08 | 2 |
skeletal muscle tissue | 1.45e-07 | 62 |
striated muscle tissue | 1.45e-07 | 62 |
myotome | 1.45e-07 | 62 |
somite | 1.84e-07 | 71 |
presomitic mesoderm | 1.84e-07 | 71 |
presumptive segmental plate | 1.84e-07 | 71 |
dermomyotome | 1.84e-07 | 71 |
trunk paraxial mesoderm | 1.84e-07 | 71 |
paraxial mesoderm | 2.57e-07 | 72 |
presumptive paraxial mesoderm | 2.57e-07 | 72 |
muscle tissue | 3.03e-07 | 64 |
musculature | 3.03e-07 | 64 |
musculature of body | 3.03e-07 | 64 |
dense mesenchyme tissue | 3.55e-07 | 73 |
multilaminar epithelium | 5.78e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.11e-13 | 5 |
myotonic disease | 4.11e-13 | 5 |
muscle tissue disease | 4.11e-13 | 5 |
myopathy | 4.11e-13 | 5 |
muscular disease | 4.11e-13 | 5 |
myotonic dystrophy | 4.11e-13 | 5 |