FFCP PHASE1:Hg19::chr12:56510933..56510957,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6171 | |EntrezGene=6171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10354 | |HGNC=10354 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=368bp_to_ENST00000552314_5end | |association_with_transcript=368bp_to_ENST00000552314_5end | ||
|cluster_id=chr12:56510933..56510957,+ | |||
|description=CAGE_peak_4_at_RPL41_5end | |description=CAGE_peak_4_at_RPL41_5end | ||
|id=chr12:56510933..56510957,+ | |id=chr12:56510933..56510957,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.34e-31!172;CL:0000566!1.34e-31!172;CL:0000988!1.03e-30!182;CL:0002032!3.40e-30!165;CL:0000837!3.40e-30!165;CL:0002087!8.52e-28!119;CL:0002031!1.21e-27!124;CL:0000738!3.68e-27!140;CL:0000542!4.35e-18!53;CL:0000051!4.35e-18!53;CL:0000838!1.03e-17!52;CL:0000860!2.00e-16!45;CL:0002057!1.29e-15!42;CL:0000763!3.46e-13!112;CL:0000049!3.46e-13!112;CL:0000003!7.11e-13!722;CL:0000063!1.07e-11!578;CL:0000134!1.76e-11!358;CL:0002009!6.41e-11!65;CL:0000219!9.46e-11!390;CL:0000839!3.24e-10!70;CL:0002194!4.10e-10!63;CL:0000576!4.10e-10!63;CL:0000040!4.10e-10!63;CL:0000559!4.10e-10!63;CL:0000557!6.57e-10!71;CL:0002320!8.74e-10!365;CL:0000766!1.19e-09!76;CL:0000945!3.89e-09!24;CL:0000826!3.89e-09!24;CL:0000084!3.00e-08!25;CL:0000827!3.00e-08!25;CL:0000012!7.29e-08!682;CL:0000791!1.10e-07!18;CL:0000789!1.10e-07!18;CL:0002420!1.10e-07!18;CL:0002419!1.10e-07!18;CL:0000790!1.10e-07!18;CL:0000548!2.91e-07!679;CL:0000004!2.91e-07!679;CL:0000255!2.91e-07!679 | |ontology_enrichment_celltype=CL:0000037!1.34e-31!172;CL:0000566!1.34e-31!172;CL:0000988!1.03e-30!182;CL:0002032!3.40e-30!165;CL:0000837!3.40e-30!165;CL:0002087!8.52e-28!119;CL:0002031!1.21e-27!124;CL:0000738!3.68e-27!140;CL:0000542!4.35e-18!53;CL:0000051!4.35e-18!53;CL:0000838!1.03e-17!52;CL:0000860!2.00e-16!45;CL:0002057!1.29e-15!42;CL:0000763!3.46e-13!112;CL:0000049!3.46e-13!112;CL:0000003!7.11e-13!722;CL:0000063!1.07e-11!578;CL:0000134!1.76e-11!358;CL:0002009!6.41e-11!65;CL:0000219!9.46e-11!390;CL:0000839!3.24e-10!70;CL:0002194!4.10e-10!63;CL:0000576!4.10e-10!63;CL:0000040!4.10e-10!63;CL:0000559!4.10e-10!63;CL:0000557!6.57e-10!71;CL:0002320!8.74e-10!365;CL:0000766!1.19e-09!76;CL:0000945!3.89e-09!24;CL:0000826!3.89e-09!24;CL:0000084!3.00e-08!25;CL:0000827!3.00e-08!25;CL:0000012!7.29e-08!682;CL:0000791!1.10e-07!18;CL:0000789!1.10e-07!18;CL:0002420!1.10e-07!18;CL:0002419!1.10e-07!18;CL:0000790!1.10e-07!18;CL:0000548!2.91e-07!679;CL:0000004!2.91e-07!679;CL:0000255!2.91e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-11;33!CL:0002057;1.05e-11;33!CL:0000542;2.61e-11;53!CL:0000945;3.56e-09;24!CL:0002087;5.83e-09;104!CL:0000084;2.06e-08;25!CL:0000576;2.15e-08;48!CL:0000791;9.66e-08;18!CL:0000789;9.66e-08;18!CL:0002419;9.66e-08;18!CL:0000473;1.76e-07;39!CL:0000234;1.76e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;1.05e-11;33!CL:0002057;1.05e-11;33!CL:0000542;2.61e-11;53!CL:0000945;3.56e-09;24!CL:0002087;5.83e-09;104!CL:0000084;2.06e-08;25!CL:0000576;2.15e-08;48!CL:0000791;9.66e-08;18!CL:0000789;9.66e-08;18!CL:0002419;9.66e-08;18!CL:0000473;1.76e-07;39!CL:0000234;1.76e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.96e-31,168;CL:0000988,3.37e-30,177;CL:0002032,9.78e-30,161;CL:0000837,9.78e-30,161;CL:0002087,2.93e-27,115;CL:0002031,4.31e-27,120;CL:0000738,1.24e-26,136;CL:0000542,4.13e-18,53;CL:0000051,4.13e-18,53;CL:0000838,9.82e-18,52;CL:0000860,1.24e-15,42;CL:0002057,1.24e-15,42;CL:0000763,8.77e-13,108;CL:0000049,8.77e-13,108;CL:0000473,3.19e-12,48;CL:0000234,3.19e-12,48;CL:0000134,4.93e-11,354;CL:0002009,2.00e-10,61;CL:0000219,2.33e-10,386;CL:0000839,1.03e-09,66;CL:0002194,1.28e-09,59;CL:0000576,1.28e-09,59;CL:0000040,1.28e-09,59;CL:0000559,1.28e-09,59;CL:0000557,1.88e-09,67;CL:0002320,2.47e-09,361;CL:0000766,3.43e-09,72;CL:0000945,3.80e-09,24;CL:0000826,3.80e-09,24;CL:0000084,2.94e-08,25;CL:0000827,2.94e-08,25;CL:0000791,1.08e-07,18;CL:0000789,1.08e-07,18;CL:0002420,1.08e-07,18;CL:0002419,1.08e-07,18;CL:0000790,1.08e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-11;42!CL:0000051;2.61e-11;53!CL:0000790;9.66e-08;18 | |ontology_enrichment_development_v019=CL:0002057;1.82e-11;42!CL:0000051;2.61e-11;53!CL:0000790;9.66e-08;18 | ||
|ontology_enrichment_disease=DOID:162!2.76e-15!235;DOID:14566!5.31e-14!239;DOID:0050687!8.88e-10!143;DOID:305!3.46e-08!106;DOID:0050686!3.68e-08!137;DOID:2531!5.01e-07!51;DOID:0060083!5.01e-07!51 | |ontology_enrichment_disease=DOID:162!2.76e-15!235;DOID:14566!5.31e-14!239;DOID:0050687!8.88e-10!143;DOID:305!3.46e-08!106;DOID:0050686!3.68e-08!137;DOID:2531!5.01e-07!51;DOID:0060083!5.01e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.90e-15,235;DOID:14566,6.04e-14,239;DOID:0050687,1.02e-09,143;DOID:0050686,3.68e-08,137;DOID:305,3.75e-08,106;DOID:2531,4.47e-07,51;DOID:0060083,4.47e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-11!102;UBERON:0003061!1.70e-11!102;UBERON:0002384!5.45e-10!375;UBERON:0002371!8.66e-10!80;UBERON:0001474!1.34e-09!86;UBERON:0002193!8.20e-09!112 | |ontology_enrichment_uberon=UBERON:0002390!1.70e-11!102;UBERON:0003061!1.70e-11!102;UBERON:0002384!5.45e-10!375;UBERON:0002371!8.66e-10!80;UBERON:0001474!1.34e-09!86;UBERON:0002193!8.20e-09!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p4@RPL41 | |short_description=p4@RPL41 | ||
}} | }} |
Latest revision as of 09:47, 19 September 2015
Short description: | p4@RPL41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPL41_5end |
Coexpression cluster: | NA |
Association with transcript: | 368bp_to_ENST00000552314_5end |
EntrezGene: | RPL41 |
HGNC: | 10354 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.97e-11 | 98 |
blood island | 4.97e-11 | 98 |
connective tissue | 1.57e-09 | 371 |
bone marrow | 2.50e-09 | 76 |
bone element | 3.88e-09 | 82 |
hemolymphoid system | 2.46e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.90e-15 | 235 |
disease of cellular proliferation | 6.04e-14 | 239 |
cell type cancer | 1.02e-09 | 143 |
organ system cancer | 3.68e-08 | 137 |
carcinoma | 3.75e-08 | 106 |
hematologic cancer | 4.47e-07 | 51 |
immune system cancer | 4.47e-07 | 51 |