FFCP PHASE1:Hg19::chr10:104402674..104402693,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104402674..104402693,+ | |||
|description=CAGE_peak_at_chr10:104402674..104402693,+ | |description=CAGE_peak_at_chr10:104402674..104402693,+ | ||
|id=chr10:104402674..104402693,+ | |id=chr10:104402674..104402693,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.53e-14!254;CL:0000076!1.61e-08!62;CL:0002076!9.68e-08!43 | |ontology_enrichment_celltype=CL:0000066!2.53e-14!254;CL:0000076!1.61e-08!62;CL:0002076!9.68e-08!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.12e-14,253;CL:0000076,3.83e-08,63;CL:0002076,4.46e-08,42;CL:0000223,5.29e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.19e-12!241;UBERON:0002050!3.11e-11!605;UBERON:0005423!3.11e-11!605;UBERON:0000923!4.98e-11!604;UBERON:0005291!4.98e-11!604;UBERON:0006598!4.98e-11!604;UBERON:0002532!4.98e-11!604;UBERON:0000922!9.05e-11!612;UBERON:0000467!1.15e-09!625;UBERON:0000480!2.04e-09!626;UBERON:0000483!7.48e-09!309;UBERON:0000468!7.93e-09!659;UBERON:0000464!2.30e-08!104;UBERON:0000119!2.60e-08!312;UBERON:0000466!3.53e-08!126;UBERON:0000477!5.15e-08!286;UBERON:0000025!5.36e-08!194;UBERON:0000481!3.48e-07!347;UBERON:0003914!7.02e-07!118 | |ontology_enrichment_uberon=UBERON:0004111!2.19e-12!241;UBERON:0002050!3.11e-11!605;UBERON:0005423!3.11e-11!605;UBERON:0000923!4.98e-11!604;UBERON:0005291!4.98e-11!604;UBERON:0006598!4.98e-11!604;UBERON:0002532!4.98e-11!604;UBERON:0000922!9.05e-11!612;UBERON:0000467!1.15e-09!625;UBERON:0000480!2.04e-09!626;UBERON:0000483!7.48e-09!309;UBERON:0000468!7.93e-09!659;UBERON:0000464!2.30e-08!104;UBERON:0000119!2.60e-08!312;UBERON:0000466!3.53e-08!126;UBERON:0000477!5.15e-08!286;UBERON:0000025!5.36e-08!194;UBERON:0000481!3.48e-07!347;UBERON:0003914!7.02e-07!118 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.69e-11,240;UBERON:0000922,4.36e-10,592;UBERON:0005423,9.92e-10,581;UBERON:0002050,1.12e-08,564;UBERON:0000923,8.65e-08,560;UBERON:0010316,8.65e-08,560;UBERON:0005291,8.65e-08,560;UBERON:0006598,8.65e-08,560;UBERON:0010317,8.65e-08,560;UBERON:0002532,8.65e-08,560;UBERON:0000483,9.18e-08,306;UBERON:0000119,3.63e-07,309;UBERON:0000025,3.84e-07,192;UBERON:0003914,8.10e-07,117 | |||
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| ||
|short_description=p@chr10:104402674..104402693,+ | |short_description=p@chr10:104402674..104402693,+ | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104402674..104402693, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104402674..104402693, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.12e-14 | 253 |
squamous epithelial cell | 3.83e-08 | 63 |
endo-epithelial cell | 4.46e-08 | 42 |
endodermal cell | 5.29e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.69e-11 | 240 |
embryo | 4.36e-10 | 592 |
developing anatomical structure | 9.92e-10 | 581 |
embryonic structure | 1.12e-08 | 564 |
germ layer | 8.65e-08 | 560 |
germ layer / neural crest | 8.65e-08 | 560 |
embryonic tissue | 8.65e-08 | 560 |
presumptive structure | 8.65e-08 | 560 |
germ layer / neural crest derived structure | 8.65e-08 | 560 |
epiblast (generic) | 8.65e-08 | 560 |
epithelium | 9.18e-08 | 306 |
cell layer | 3.63e-07 | 309 |
tube | 3.84e-07 | 192 |
epithelial tube | 8.10e-07 | 117 |