FFCP PHASE1:Hg19::chr3:108964494..108964500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:108964494..108964500,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_at_chr3:108964494..108964500,- | |description=CAGE_peak_at_chr3:108964494..108964500,- | ||
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|ontology_enrichment_celltype=CL:0000148!1.02e-34!10;CL:0000541!1.02e-34!10;CL:0000147!1.41e-24!14;CL:0002567!1.49e-22!3;CL:0000710!5.87e-17!20;CL:0000075!2.44e-12!27;CL:0002077!6.16e-10!33;CL:0000333!1.52e-09!41;CL:0002566!1.52e-08!1;CL:0000325!2.84e-08!39 | |ontology_enrichment_celltype=CL:0000148!1.02e-34!10;CL:0000541!1.02e-34!10;CL:0000147!1.41e-24!14;CL:0002567!1.49e-22!3;CL:0000710!5.87e-17!20;CL:0000075!2.44e-12!27;CL:0002077!6.16e-10!33;CL:0000333!1.52e-09!41;CL:0002566!1.52e-08!1;CL:0000325!2.84e-08!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;9.37e-81;10!CL:0000147;1.13e-57;14!CL:0002567;9.60e-51;3!CL:0000710;2.44e-40;20!CL:0000075;7.78e-30;27!CL:0002077;6.98e-21;34!CL:0002566;6.78e-18;1!CL:0000054;1.78e-09;2!CL:0000137;1.78e-09;2!CL:0000092;1.78e-09;2 | |ontology_enrichment_celltype_v019=CL:0000148;9.37e-81;10!CL:0000147;1.13e-57;14!CL:0002567;9.60e-51;3!CL:0000710;2.44e-40;20!CL:0000075;7.78e-30;27!CL:0002077;6.98e-21;34!CL:0002566;6.78e-18;1!CL:0000054;1.78e-09;2!CL:0000137;1.78e-09;2!CL:0000092;1.78e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,9.38e-81,10;CL:0000541,9.38e-81,10;CL:0000147,1.13e-57,14;CL:0002567,9.60e-51,3;CL:0000710,2.44e-40,20;CL:0000075,7.78e-30,27;CL:0002077,1.21e-23,34;CL:0000333,1.23e-18,41;CL:0002566,7.37e-18,1;CL:0000133,4.90e-13,59;CL:0000221,1.12e-10,72;CL:0000054,1.57e-09,2;CL:0000137,1.57e-09,2;CL:0000092,1.57e-09,2;CL:0000062,7.37e-07,11;CL:0000375,7.37e-07,11;CL:0000335,7.37e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000133;2.39e-07;59!CL:0000335;7.37e-07;11 | |ontology_enrichment_development_v019=CL:0000133;2.39e-07;59!CL:0000335;7.37e-07;11 | ||
|ontology_enrichment_disease=DOID:1909!5.52e-15!2;DOID:0060085!1.75e-08!1;DOID:3165!1.75e-08!1;DOID:0060121!1.75e-08!1;DOID:2438!1.75e-08!1;DOID:4418!1.75e-08!1 | |ontology_enrichment_disease=DOID:1909!5.52e-15!2;DOID:0060085!1.75e-08!1;DOID:3165!1.75e-08!1;DOID:0060121!1.75e-08!1;DOID:2438!1.75e-08!1;DOID:4418!1.75e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.33e-17;1!DOID:3165;1.33e-17;1!DOID:0060121;1.33e-17;1!DOID:2438;1.33e-17;1!DOID:4418;1.33e-17;1!DOID:1909;1.12e-09;2!DOID:200;1.78e-09;2!DOID:4305;1.78e-09;2 | |ontology_enrichment_disease_v019=DOID:0060085;1.33e-17;1!DOID:3165;1.33e-17;1!DOID:0060121;1.33e-17;1!DOID:2438;1.33e-17;1!DOID:4418;1.33e-17;1!DOID:1909;1.12e-09;2!DOID:200;1.78e-09;2!DOID:4305;1.78e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.03e-17,1;DOID:3165,1.03e-17,1;DOID:0060121,1.03e-17,1;DOID:2438,1.03e-17,1;DOID:4418,1.03e-17,1;DOID:1909,1.12e-09,2;DOID:200,1.57e-09,2;DOID:4305,1.57e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.88e-08!1;UBERON:0009842!1.88e-08!1;UBERON:0003704!1.88e-08!1;UBERON:0001171!1.88e-08!1;UBERON:0001172!1.88e-08!1 | |ontology_enrichment_uberon=UBERON:0001282!1.88e-08!1;UBERON:0009842!1.88e-08!1;UBERON:0003704!1.88e-08!1;UBERON:0001171!1.88e-08!1;UBERON:0001172!1.88e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.33e-17;1!UBERON:0009842;1.33e-17;1!UBERON:0003704;1.33e-17;1!UBERON:0001171;1.33e-17;1!UBERON:0001172;1.33e-17;1!UBERON:0001280;9.91e-07;3!UBERON:0004647;9.91e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001282;1.33e-17;1!UBERON:0009842;1.33e-17;1!UBERON:0003704;1.33e-17;1!UBERON:0001171;1.33e-17;1!UBERON:0001172;1.33e-17;1!UBERON:0001280;9.91e-07;3!UBERON:0004647;9.91e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.22e-17,1;UBERON:0009842,1.22e-17,1;UBERON:0003704,1.22e-17,1;UBERON:0001171,1.22e-17,1;UBERON:0001172,1.22e-17,1;UBERON:0001280,9.64e-07,3;UBERON:0004647,9.64e-07,3;UBERON:0005171,9.64e-07,3 | |||
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|short_description=p@chr3:108964494..108964500,- | |short_description=p@chr3:108964494..108964500,- | ||
}} | }} |
Latest revision as of 14:06, 29 July 2015
Short description: | p@chr3:108964494..108964500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:108964494..108964500, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.38e-81 | 10 |
melanoblast | 9.38e-81 | 10 |
pigment cell | 1.13e-57 | 14 |
light melanocyte | 9.60e-51 | 3 |
neurecto-epithelial cell | 2.44e-40 | 20 |
columnar/cuboidal epithelial cell | 7.78e-30 | 27 |
ecto-epithelial cell | 1.21e-23 | 34 |
migratory neural crest cell | 1.23e-18 | 41 |
dark melanocyte | 7.37e-18 | 1 |
neurectodermal cell | 4.90e-13 | 59 |
ectodermal cell | 1.12e-10 | 72 |
bone matrix secreting cell | 1.57e-09 | 2 |
osteocyte | 1.57e-09 | 2 |
osteoclast | 1.57e-09 | 2 |
osteoblast | 7.37e-07 | 11 |
osteoprogenitor cell | 7.37e-07 | 11 |
mesenchyme condensation cell | 7.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.22e-17 | 1 |
acinus | 1.22e-17 | 1 |
intrahepatic bile duct | 1.22e-17 | 1 |
portal lobule | 1.22e-17 | 1 |
hepatic acinus | 1.22e-17 | 1 |
liver parenchyma | 9.64e-07 | 3 |
liver lobule | 9.64e-07 | 3 |
hepatic duct | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.03e-17 | 1 |
skin benign neoplasm | 1.03e-17 | 1 |
integumentary system benign neoplasm | 1.03e-17 | 1 |
dermis tumor | 1.03e-17 | 1 |
cutaneous fibrous histiocytoma | 1.03e-17 | 1 |
melanoma | 1.12e-09 | 2 |
giant cell tumor | 1.57e-09 | 2 |
bone giant cell tumor | 1.57e-09 | 2 |