FFCP PHASE1:Hg19::chr17:79623545..79623592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5148 | |EntrezGene=5148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8789 | |HGNC=8789 | ||
|TSSclassifier=strong | |||
|UniProt=P18545 | |UniProt=P18545 | ||
|association_with_transcript=14bp_to_ENST00000331056,NM_002602,NR_026872,uc002kay.3,uc002kaz.3_5end | |association_with_transcript=14bp_to_ENST00000331056,NM_002602,NR_026872,uc002kay.3,uc002kaz.3_5end | ||
|cluster_id=chr17:79623545..79623592,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_PDE6G_5end | |description=CAGE_peak_1_at_PDE6G_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!5.81e-14!2;CL:0000765!5.81e-14!2;CL:0000050!5.81e-14!2;CL:0000038!5.81e-14!2;CL:0000558!5.81e-14!2;CL:0000547!5.81e-14!2;CL:0000549!5.81e-14!2;CL:0000550!5.81e-14!2;CL:0000552!5.81e-14!2 | |ontology_enrichment_celltype=CL:0000764!5.81e-14!2;CL:0000765!5.81e-14!2;CL:0000050!5.81e-14!2;CL:0000038!5.81e-14!2;CL:0000558!5.81e-14!2;CL:0000547!5.81e-14!2;CL:0000549!5.81e-14!2;CL:0000550!5.81e-14!2;CL:0000552!5.81e-14!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.43e-12;2 | |ontology_enrichment_celltype_v019=CL:0000047;3.43e-12;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.30e-30;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.30e-30;3 | ||
|ontology_enrichment_disease=DOID:8552!5.33e-08!1;DOID:5409!2.13e-07!4 | |ontology_enrichment_disease=DOID:8552!5.33e-08!1;DOID:5409!2.13e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5409;8.14e-07;4 | |ontology_enrichment_disease_v019=DOID:5409;8.14e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!9.65e-15!2;UBERON:0002757!9.65e-15!2;UBERON:0010134!9.65e-15!2;UBERON:0002784!9.65e-15!2;UBERON:0005408!9.65e-15!2;UBERON:0001899!9.65e-15!2;UBERON:0006331!1.50e-09!3;UBERON:0003296!8.53e-08!4;UBERON:0010133!8.53e-08!4;UBERON:0002038!9.72e-08!1;UBERON:0009661!9.72e-08!1 | |ontology_enrichment_uberon=UBERON:0001905!9.65e-15!2;UBERON:0002757!9.65e-15!2;UBERON:0010134!9.65e-15!2;UBERON:0002784!9.65e-15!2;UBERON:0005408!9.65e-15!2;UBERON:0001899!9.65e-15!2;UBERON:0006331!1.50e-09!3;UBERON:0003296!8.53e-08!4;UBERON:0010133!8.53e-08!4;UBERON:0002038!9.72e-08!1;UBERON:0009661!9.72e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.00e-45;2!UBERON:0002757;5.00e-45;2!UBERON:0010134;5.00e-45;2!UBERON:0005408;5.00e-45;2!UBERON:0001899;5.00e-45;2!UBERON:0003296;4.11e-23;4!UBERON:0010133;4.11e-23;4!UBERON:0002784;4.11e-23;4!UBERON:0000966;1.13e-18;5!UBERON:0005388;1.13e-18;5!UBERON:0001802;1.13e-18;5!UBERON:0001894;1.15e-13;7!UBERON:0002360;2.90e-12;2!UBERON:0000094;2.90e-12;2!UBERON:0010743;2.90e-12;2!UBERON:0000970;1.12e-10;20!UBERON:0002104;3.35e-10;21!UBERON:0000020;2.28e-09;23!UBERON:0001032;5.28e-09;24!UBERON:0004456;5.28e-09;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;5.00e-45;2!UBERON:0002757;5.00e-45;2!UBERON:0010134;5.00e-45;2!UBERON:0005408;5.00e-45;2!UBERON:0001899;5.00e-45;2!UBERON:0003296;4.11e-23;4!UBERON:0010133;4.11e-23;4!UBERON:0002784;4.11e-23;4!UBERON:0000966;1.13e-18;5!UBERON:0005388;1.13e-18;5!UBERON:0001802;1.13e-18;5!UBERON:0001894;1.15e-13;7!UBERON:0002360;2.90e-12;2!UBERON:0000094;2.90e-12;2!UBERON:0010743;2.90e-12;2!UBERON:0000970;1.12e-10;20!UBERON:0002104;3.35e-10;21!UBERON:0000020;2.28e-09;23!UBERON:0001032;5.28e-09;24!UBERON:0004456;5.28e-09;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.00e-45,2;UBERON:0002757,5.00e-45,2;UBERON:0010134,5.00e-45,2;UBERON:0005408,5.00e-45,2;UBERON:0001899,5.00e-45,2;UBERON:0003296,4.11e-23,4;UBERON:0010133,4.11e-23,4;UBERON:0002784,4.11e-23,4;UBERON:0000966,9.74e-16,6;UBERON:0005388,9.74e-16,6;UBERON:0001802,9.74e-16,6;UBERON:0001894,1.15e-13,7;UBERON:0006222,1.15e-13,7;UBERON:0002360,2.90e-12,2;UBERON:0000094,2.90e-12,2;UBERON:0010743,2.90e-12,2;UBERON:0000970,3.35e-10,21;UBERON:0002104,3.35e-10,21;UBERON:0000020,5.28e-09,24;UBERON:0001032,5.28e-09,24;UBERON:0004456,5.28e-09,24;UBERON:0001017,8.95e-07,81 | |||
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|short_description=p1@PDE6G | |short_description=p1@PDE6G | ||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p1@PDE6G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE6G_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 14bp_to_ENST00000331056, NM_002602, NR_026872, uc002kay.3, uc002kaz.3_5end |
EntrezGene: | PDE6G |
HGNC: | 8789 |
UniProt: | P18545 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.00e-45 | 2 |
regional part of epithalamus | 5.00e-45 | 2 |
secretory circumventricular organ | 5.00e-45 | 2 |
circumventricular organ | 5.00e-45 | 2 |
epithalamus | 5.00e-45 | 2 |
gland of diencephalon | 4.11e-23 | 4 |
neuroendocrine gland | 4.11e-23 | 4 |
regional part of diencephalon | 4.11e-23 | 4 |
retina | 9.74e-16 | 6 |
photoreceptor array | 9.74e-16 | 6 |
posterior segment of eyeball | 9.74e-16 | 6 |
diencephalon | 1.15e-13 | 7 |
future diencephalon | 1.15e-13 | 7 |
meninx | 2.90e-12 | 2 |
membrane organ | 2.90e-12 | 2 |
meningeal cluster | 2.90e-12 | 2 |
eye | 3.35e-10 | 21 |
visual system | 3.35e-10 | 21 |
sense organ | 5.28e-09 | 24 |
sensory system | 5.28e-09 | 24 |
entire sense organ system | 5.28e-09 | 24 |
central nervous system | 8.95e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.14e-07 | 4 |