FFCP PHASE1:Hg19::chr14:97925151..97925193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000554260,ENST00000554862_5end | |association_with_transcript=0bp_to_ENST00000554260,ENST00000554862_5end | ||
|cluster_id=chr14:97925151..97925193,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_ENST00000554260_5end,CAGE_peak_1_at_ENST00000554862_5end | |description=CAGE_peak_1_at_ENST00000554260_5end,CAGE_peak_1_at_ENST00000554862_5end | ||
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|ontology_enrichment_celltype=CL:0000791!1.30e-22!18;CL:0000789!1.30e-22!18;CL:0002420!1.30e-22!18;CL:0002419!1.30e-22!18;CL:0000790!1.30e-22!18;CL:0000084!7.56e-20!25;CL:0000827!7.56e-20!25;CL:0000738!9.70e-19!140;CL:0002087!2.06e-16!119;CL:0000838!1.10e-15!52;CL:0000542!3.46e-15!53;CL:0000051!3.46e-15!53;CL:0000625!1.17e-14!11;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002031!1.65e-12!124;CL:0000988!9.03e-12!182;CL:0002032!6.77e-11!165;CL:0000837!6.77e-11!165;CL:0002393!6.26e-09!9;CL:0002397!6.26e-09!9;CL:0000624!1.69e-08!6 | |ontology_enrichment_celltype=CL:0000791!1.30e-22!18;CL:0000789!1.30e-22!18;CL:0002420!1.30e-22!18;CL:0002419!1.30e-22!18;CL:0000790!1.30e-22!18;CL:0000084!7.56e-20!25;CL:0000827!7.56e-20!25;CL:0000738!9.70e-19!140;CL:0002087!2.06e-16!119;CL:0000838!1.10e-15!52;CL:0000542!3.46e-15!53;CL:0000051!3.46e-15!53;CL:0000625!1.17e-14!11;CL:0000037!1.38e-13!172;CL:0000566!1.38e-13!172;CL:0002031!1.65e-12!124;CL:0000988!9.03e-12!182;CL:0002032!6.77e-11!165;CL:0000837!6.77e-11!165;CL:0002393!6.26e-09!9;CL:0002397!6.26e-09!9;CL:0000624!1.69e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.37e-43;18!CL:0000789;8.37e-43;18!CL:0002419;8.37e-43;18!CL:0000084;2.94e-36;25!CL:0000625;3.25e-27;11!CL:0000624;4.43e-15;6!CL:0000542;1.40e-10;53!CL:0000898;1.55e-08;3!CL:0000226;5.31e-08;3!CL:0000842;5.31e-08;3!CL:0000623;1.10e-07;3!CL:0000875;2.97e-07;3!CL:0002396;2.97e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;8.37e-43;18!CL:0000789;8.37e-43;18!CL:0002419;8.37e-43;18!CL:0000084;2.94e-36;25!CL:0000625;3.25e-27;11!CL:0000624;4.43e-15;6!CL:0000542;1.40e-10;53!CL:0000898;1.55e-08;3!CL:0000226;5.31e-08;3!CL:0000842;5.31e-08;3!CL:0000623;1.10e-07;3!CL:0000875;2.97e-07;3!CL:0002396;2.97e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.62e-43,18;CL:0000789,8.62e-43,18;CL:0002420,8.62e-43,18;CL:0002419,8.62e-43,18;CL:0000790,8.62e-43,18;CL:0000084,3.51e-36,25;CL:0000827,3.51e-36,25;CL:0000625,3.69e-27,11;CL:0000838,1.46e-19,52;CL:0000542,4.53e-19,53;CL:0000051,4.53e-19,53;CL:0000738,4.72e-17,136;CL:0002087,5.83e-16,115;CL:0000624,4.17e-15,6;CL:0000037,1.38e-13,168;CL:0000988,2.31e-12,177;CL:0002031,9.55e-12,120;CL:0002032,5.05e-11,161;CL:0000837,5.05e-11,161;CL:0000898,1.63e-08,3;CL:0002393,4.30e-08,9;CL:0002397,4.30e-08,9;CL:0000226,5.57e-08,3;CL:0000842,5.57e-08,3;CL:0000623,1.06e-07,3;CL:0000825,1.06e-07,3;CL:0000875,3.86e-07,3;CL:0002396,3.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.37e-43;18!CL:0000051;1.40e-10;53 | |ontology_enrichment_development_v019=CL:0000790;8.37e-43;18!CL:0000051;1.40e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-16!115;UBERON:0000178!8.71e-11!15;UBERON:0000179!8.71e-11!15;UBERON:0000463!8.71e-11!15;UBERON:0002390!1.47e-09!102;UBERON:0003061!1.47e-09!102;UBERON:0002193!5.28e-09!112;UBERON:0004177!7.90e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-16!115;UBERON:0000178!8.71e-11!15;UBERON:0000179!8.71e-11!15;UBERON:0000463!8.71e-11!15;UBERON:0002390!1.47e-09!102;UBERON:0003061!1.47e-09!102;UBERON:0002193!5.28e-09!112;UBERON:0004177!7.90e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.54e-21;15!UBERON:0000179;6.54e-21;15!UBERON:0000463;6.54e-21;15!UBERON:0002390;2.99e-16;32!UBERON:0002193;2.42e-11;42!UBERON:0004177;4.74e-08;5!UBERON:0005057;4.74e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.54e-21;15!UBERON:0000179;6.54e-21;15!UBERON:0000463;6.54e-21;15!UBERON:0002390;2.99e-16;32!UBERON:0002193;2.42e-11;42!UBERON:0004177;4.74e-08;5!UBERON:0005057;4.74e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.54e-21,15;UBERON:0000179,7.54e-21,15;UBERON:0000463,7.54e-21,15;UBERON:0004177,2.51e-12,7;UBERON:0005057,2.51e-12,7;UBERON:0002193,3.16e-11,108;UBERON:0002370,5.81e-11,4;UBERON:0005058,5.81e-11,4;UBERON:0009113,5.81e-11,4;UBERON:0003295,5.81e-11,4;UBERON:0005562,5.81e-11,4;UBERON:0002390,5.99e-11,98;UBERON:0003061,5.99e-11,98;UBERON:0003351,2.87e-07,6 | |||
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| ||
|short_description=p1@ENST00000554260,p1@ENST00000554862 | |short_description=p1@ENST00000554260,p1@ENST00000554862 | ||
}} | }} |
Latest revision as of 00:10, 25 July 2015
Short description: | p1@ENST00000554260, p1@ENST00000554862 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000554260_5end, CAGE_peak_1_at_ENST00000554862_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000554260, ENST00000554862_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.62e-43 | 18 |
alpha-beta T cell | 8.62e-43 | 18 |
immature T cell | 8.62e-43 | 18 |
mature T cell | 8.62e-43 | 18 |
immature alpha-beta T cell | 8.62e-43 | 18 |
T cell | 3.51e-36 | 25 |
pro-T cell | 3.51e-36 | 25 |
CD8-positive, alpha-beta T cell | 3.69e-27 | 11 |
lymphoid lineage restricted progenitor cell | 1.46e-19 | 52 |
lymphocyte | 4.53e-19 | 53 |
common lymphoid progenitor | 4.53e-19 | 53 |
leukocyte | 4.72e-17 | 136 |
nongranular leukocyte | 5.83e-16 | 115 |
CD4-positive, alpha-beta T cell | 4.17e-15 | 6 |
hematopoietic stem cell | 1.38e-13 | 168 |
hematopoietic cell | 2.31e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 9.55e-12 | 120 |
hematopoietic oligopotent progenitor cell | 5.05e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-11 | 161 |
naive T cell | 1.63e-08 | 3 |
intermediate monocyte | 4.30e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.30e-08 | 9 |
single nucleate cell | 5.57e-08 | 3 |
mononuclear cell | 5.57e-08 | 3 |
natural killer cell | 1.06e-07 | 3 |
pro-NK cell | 1.06e-07 | 3 |
non-classical monocyte | 3.86e-07 | 3 |
CD14-low, CD16-positive monocyte | 3.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.54e-21 | 15 |
haemolymphatic fluid | 7.54e-21 | 15 |
organism substance | 7.54e-21 | 15 |
hemopoietic organ | 2.51e-12 | 7 |
immune organ | 2.51e-12 | 7 |
hemolymphoid system | 3.16e-11 | 108 |
thymus | 5.81e-11 | 4 |
hemolymphoid system gland | 5.81e-11 | 4 |
thymic region | 5.81e-11 | 4 |
pharyngeal gland | 5.81e-11 | 4 |
thymus primordium | 5.81e-11 | 4 |
hematopoietic system | 5.99e-11 | 98 |
blood island | 5.99e-11 | 98 |
pharyngeal epithelium | 2.87e-07 | 6 |