FFCP PHASE1:Hg19::chr22:25507452..25507476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:25507452..25507476,+ | |||
|description=CAGE_peak_at_chr22:25507452..25507476,+ | |description=CAGE_peak_at_chr22:25507452..25507476,+ | ||
|id=chr22:25507452..25507476,+ | |id=chr22:25507452..25507476,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.83e-17!24;CL:0000071!7.22e-16!18;CL:0002546!7.22e-16!18;CL:0000115!2.99e-15!35;CL:0000066!2.02e-11!254;CL:0002078!2.73e-11!44;CL:1000413!6.68e-10!9;CL:0000076!8.99e-10!62;CL:0000223!6.88e-08!59;CL:0000213!2.94e-07!57;CL:0000215!2.94e-07!57;CL:0002544!3.90e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.83e-17!24;CL:0000071!7.22e-16!18;CL:0002546!7.22e-16!18;CL:0000115!2.99e-15!35;CL:0000066!2.02e-11!254;CL:0002078!2.73e-11!44;CL:1000413!6.68e-10!9;CL:0000076!8.99e-10!62;CL:0000223!6.88e-08!59;CL:0000213!2.94e-07!57;CL:0000215!2.94e-07!57;CL:0002544!3.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-23;36!CL:0002139;1.74e-20;24!CL:1000413;1.03e-16;9!CL:0000071;1.56e-14;18!CL:0002078;6.54e-12;45!CL:0002544;1.05e-11;6!CL:0000213;1.02e-10;58!CL:0000215;1.02e-10;58!CL:0002262;5.85e-10;2!CL:1000398;5.85e-10;2!CL:0002545;1.33e-09;2!CL:0000182;6.33e-09;12!CL:0002138;1.29e-07;6!CL:0002144;2.08e-07;3 | |ontology_enrichment_celltype_v019=CL:0000115;3.00e-23;36!CL:0002139;1.74e-20;24!CL:1000413;1.03e-16;9!CL:0000071;1.56e-14;18!CL:0002078;6.54e-12;45!CL:0002544;1.05e-11;6!CL:0000213;1.02e-10;58!CL:0000215;1.02e-10;58!CL:0002262;5.85e-10;2!CL:1000398;5.85e-10;2!CL:0002545;1.33e-09;2!CL:0000182;6.33e-09;12!CL:0002138;1.29e-07;6!CL:0002144;2.08e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.13e-24,36;CL:0002139,2.19e-20,24;CL:0002078,4.82e-19,45;CL:1000413,1.30e-16,9;CL:0000071,1.79e-14,18;CL:0002546,1.79e-14,18;CL:0000213,5.24e-14,58;CL:0000215,5.24e-14,58;CL:0002544,9.73e-12,6;CL:0002262,4.01e-10,2;CL:1000398,4.01e-10,2;CL:0002545,1.22e-09,2;CL:0000182,5.94e-09,12;CL:0000066,3.97e-08,253;CL:0005020,1.41e-07,6;CL:0002138,1.41e-07,6;CL:0005022,1.41e-07,6;CL:0002144,2.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.56e-14;18!CL:0005022;1.29e-07;6 | |ontology_enrichment_development_v019=CL:0002546;1.56e-14;18!CL:0005022;1.29e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!7.25e-17!241;UBERON:0007023!1.44e-16!115;UBERON:0000483!6.05e-16!309;UBERON:0001986!7.22e-16!18;UBERON:0004638!7.22e-16!18;UBERON:0004852!7.22e-16!18;UBERON:0000119!1.88e-15!312;UBERON:0000153!9.67e-15!129;UBERON:0007811!9.67e-15!129;UBERON:0000477!4.27e-14!286;UBERON:0004121!8.19e-14!169;UBERON:0000033!1.80e-13!123;UBERON:0000924!5.61e-13!173;UBERON:0006601!5.61e-13!173;UBERON:0003056!6.63e-13!61;UBERON:0000468!1.17e-12!659;UBERON:0000025!6.68e-12!194;UBERON:0000487!8.42e-12!22;UBERON:0003075!1.24e-11!86;UBERON:0007284!1.24e-11!86;UBERON:0000922!1.47e-11!612;UBERON:0000467!1.55e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0000475!6.02e-11!365;UBERON:0005743!1.46e-10!86;UBERON:0002346!1.65e-10!90;UBERON:0002050!3.46e-10!605;UBERON:0005423!3.46e-10!605;UBERON:0003915!6.68e-10!9;UBERON:0004700!6.68e-10!9;UBERON:0001917!6.68e-10!9;UBERON:0000481!7.46e-10!347;UBERON:0000923!7.49e-10!604;UBERON:0005291!7.49e-10!604;UBERON:0006598!7.49e-10!604;UBERON:0002532!7.49e-10!604;UBERON:0006914!1.19e-09!25;UBERON:0002780!2.82e-09!41;UBERON:0001890!2.82e-09!41;UBERON:0006240!2.82e-09!41;UBERON:0000073!5.93e-09!94;UBERON:0001016!5.93e-09!94;UBERON:0003080!7.10e-09!42;UBERON:0001869!1.12e-08!32;UBERON:0001017!1.40e-08!82;UBERON:0001893!1.52e-08!34;UBERON:0002791!6.76e-08!33;UBERON:0000955!8.30e-08!69;UBERON:0006238!8.30e-08!69;UBERON:0000064!1.16e-07!219;UBERON:0002020!1.33e-07!34;UBERON:0003528!1.33e-07!34;UBERON:0001444!1.67e-07!48;UBERON:0002365!2.41e-07!31;UBERON:0002330!2.41e-07!31;UBERON:0001049!3.53e-07!57;UBERON:0005068!3.53e-07!57;UBERON:0006241!3.53e-07!57;UBERON:0007135!3.53e-07!57;UBERON:0000956!9.09e-07!25;UBERON:0000203!9.09e-07!25 | |ontology_enrichment_uberon=UBERON:0004111!7.25e-17!241;UBERON:0007023!1.44e-16!115;UBERON:0000483!6.05e-16!309;UBERON:0001986!7.22e-16!18;UBERON:0004638!7.22e-16!18;UBERON:0004852!7.22e-16!18;UBERON:0000119!1.88e-15!312;UBERON:0000153!9.67e-15!129;UBERON:0007811!9.67e-15!129;UBERON:0000477!4.27e-14!286;UBERON:0004121!8.19e-14!169;UBERON:0000033!1.80e-13!123;UBERON:0000924!5.61e-13!173;UBERON:0006601!5.61e-13!173;UBERON:0003056!6.63e-13!61;UBERON:0000468!1.17e-12!659;UBERON:0000025!6.68e-12!194;UBERON:0000487!8.42e-12!22;UBERON:0003075!1.24e-11!86;UBERON:0007284!1.24e-11!86;UBERON:0000922!1.47e-11!612;UBERON:0000467!1.55e-11!625;UBERON:0000480!1.97e-11!626;UBERON:0000475!6.02e-11!365;UBERON:0005743!1.46e-10!86;UBERON:0002346!1.65e-10!90;UBERON:0002050!3.46e-10!605;UBERON:0005423!3.46e-10!605;UBERON:0003915!6.68e-10!9;UBERON:0004700!6.68e-10!9;UBERON:0001917!6.68e-10!9;UBERON:0000481!7.46e-10!347;UBERON:0000923!7.49e-10!604;UBERON:0005291!7.49e-10!604;UBERON:0006598!7.49e-10!604;UBERON:0002532!7.49e-10!604;UBERON:0006914!1.19e-09!25;UBERON:0002780!2.82e-09!41;UBERON:0001890!2.82e-09!41;UBERON:0006240!2.82e-09!41;UBERON:0000073!5.93e-09!94;UBERON:0001016!5.93e-09!94;UBERON:0003080!7.10e-09!42;UBERON:0001869!1.12e-08!32;UBERON:0001017!1.40e-08!82;UBERON:0001893!1.52e-08!34;UBERON:0002791!6.76e-08!33;UBERON:0000955!8.30e-08!69;UBERON:0006238!8.30e-08!69;UBERON:0000064!1.16e-07!219;UBERON:0002020!1.33e-07!34;UBERON:0003528!1.33e-07!34;UBERON:0001444!1.67e-07!48;UBERON:0002365!2.41e-07!31;UBERON:0002330!2.41e-07!31;UBERON:0001049!3.53e-07!57;UBERON:0005068!3.53e-07!57;UBERON:0006241!3.53e-07!57;UBERON:0007135!3.53e-07!57;UBERON:0000956!9.09e-07!25;UBERON:0000203!9.09e-07!25 | ||
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| ||
|short_description=p@chr22:25507452..25507476,+ | |short_description=p@chr22:25507452..25507476,+ | ||
}} | }} |
Latest revision as of 19:42, 28 July 2015
Short description: | p@chr22:25507452..25507476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:25507452..25507476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.13e-24 | 36 |
endothelial cell of vascular tree | 2.19e-20 | 24 |
meso-epithelial cell | 4.82e-19 | 45 |
endothelial cell of artery | 1.30e-16 | 9 |
blood vessel endothelial cell | 1.79e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.79e-14 | 18 |
lining cell | 5.24e-14 | 58 |
barrier cell | 5.24e-14 | 58 |
aortic endothelial cell | 9.73e-12 | 6 |
endothelial cell of sinusoid | 4.01e-10 | 2 |
endothelial cell of hepatic sinusoid | 4.01e-10 | 2 |
thoracic aorta endothelial cell | 1.22e-09 | 2 |
hepatocyte | 5.94e-09 | 12 |
epithelial cell | 3.97e-08 | 253 |
lymphangioblast | 1.41e-07 | 6 |
endothelial cell of lymphatic vessel | 1.41e-07 | 6 |
vascular lymphangioblast | 1.41e-07 | 6 |
capillary endothelial cell | 2.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.30e-16 | 9 |
arterial system endothelium | 1.30e-16 | 9 |
endothelium of artery | 1.30e-16 | 9 |
blood vessel endothelium | 1.79e-14 | 18 |
endothelium | 1.79e-14 | 18 |
cardiovascular system endothelium | 1.79e-14 | 18 |
simple squamous epithelium | 1.31e-11 | 22 |
hepatic sinusoid | 4.01e-10 | 2 |
abdomen blood vessel | 4.01e-10 | 2 |
sinusoid | 4.01e-10 | 2 |
abdominal segment blood vessel | 4.01e-10 | 2 |
muscle structure | 4.39e-10 | 2 |
muscle organ | 4.39e-10 | 2 |
squamous epithelium | 4.61e-10 | 25 |
segment of aorta | 1.22e-09 | 2 |
thoracic aorta | 1.22e-09 | 2 |
anatomical conduit | 1.23e-09 | 240 |
throat | 2.25e-09 | 2 |
vessel | 2.43e-08 | 68 |
epithelium | 3.74e-08 | 306 |
cell layer | 5.25e-08 | 309 |
exocrine gland | 5.96e-08 | 31 |
exocrine system | 5.96e-08 | 31 |
liver | 7.49e-08 | 19 |
digestive gland | 7.49e-08 | 19 |
liver bud | 7.49e-08 | 19 |
microcirculatory vessel | 2.02e-07 | 3 |
endothelium of capillary | 2.02e-07 | 3 |
capillary | 2.02e-07 | 3 |
unilaminar epithelium | 3.08e-07 | 148 |
epithelial tube | 4.91e-07 | 117 |
liver parenchyma | 5.18e-07 | 3 |
liver lobule | 5.18e-07 | 3 |
hepatic duct | 5.18e-07 | 3 |
vasculature | 6.21e-07 | 78 |
vascular system | 6.21e-07 | 78 |