FFCP PHASE1:Hg19::chr12:11899098..11899120,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:11899098..11899120,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr12:11899098..11899120,- | |description=CAGE_peak_at_chr12:11899098..11899120,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!5.65e-86!42;CL:0000860!2.11e-79!45;CL:0000738!3.04e-71!140;CL:0000766!1.33e-70!76;CL:0002009!1.89e-61!65;CL:0000557!1.70e-60!71;CL:0000037!3.22e-60!172;CL:0000566!3.22e-60!172;CL:0000763!7.84e-58!112;CL:0000049!7.84e-58!112;CL:0002194!1.21e-57!63;CL:0000576!1.21e-57!63;CL:0000040!1.21e-57!63;CL:0000559!1.21e-57!63;CL:0000988!6.67e-56!182;CL:0000839!8.73e-56!70;CL:0002032!2.13e-55!165;CL:0000837!2.13e-55!165;CL:0002087!1.52e-52!119;CL:0002031!1.70e-51!124;CL:0000134!4.78e-21!358;CL:0002320!2.77e-20!365;CL:0000219!1.34e-17!390;CL:0000034!1.42e-15!444;CL:0000048!4.29e-15!430;CL:0000723!1.25e-14!436;CL:0000094!2.88e-14!8;CL:0002393!1.72e-12!9;CL:0002397!1.72e-12!9;CL:0000990!5.08e-11!8;CL:0000453!6.05e-11!5;CL:0000081!4.87e-10!11;CL:0000451!7.98e-09!10;CL:0000767!2.29e-08!3;CL:0000842!7.55e-08!3;CL:0000623!3.39e-07!3;CL:0000825!3.39e-07!3;CL:0000063!5.11e-07!578 | |ontology_enrichment_celltype=CL:0002057!5.65e-86!42;CL:0000860!2.11e-79!45;CL:0000738!3.04e-71!140;CL:0000766!1.33e-70!76;CL:0002009!1.89e-61!65;CL:0000557!1.70e-60!71;CL:0000037!3.22e-60!172;CL:0000566!3.22e-60!172;CL:0000763!7.84e-58!112;CL:0000049!7.84e-58!112;CL:0002194!1.21e-57!63;CL:0000576!1.21e-57!63;CL:0000040!1.21e-57!63;CL:0000559!1.21e-57!63;CL:0000988!6.67e-56!182;CL:0000839!8.73e-56!70;CL:0002032!2.13e-55!165;CL:0000837!2.13e-55!165;CL:0002087!1.52e-52!119;CL:0002031!1.70e-51!124;CL:0000134!4.78e-21!358;CL:0002320!2.77e-20!365;CL:0000219!1.34e-17!390;CL:0000034!1.42e-15!444;CL:0000048!4.29e-15!430;CL:0000723!1.25e-14!436;CL:0000094!2.88e-14!8;CL:0002393!1.72e-12!9;CL:0002397!1.72e-12!9;CL:0000990!5.08e-11!8;CL:0000453!6.05e-11!5;CL:0000081!4.87e-10!11;CL:0000451!7.98e-09!10;CL:0000767!2.29e-08!3;CL:0000842!7.55e-08!3;CL:0000623!3.39e-07!3;CL:0000825!3.39e-07!3;CL:0000063!5.11e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.36e-95;33!CL:0002057;4.36e-95;33!CL:0000473;4.66e-67;39!CL:0000234;4.66e-67;39!CL:0000576;4.94e-61;48!CL:0000766;6.60e-46;69!CL:0002393;1.34e-23;6!CL:0002397;1.34e-23;6!CL:0000094;4.36e-23;8!CL:0000763;6.18e-20;100!CL:0002087;7.71e-17;104!CL:0000081;1.55e-16;11!CL:0000767;6.35e-13;3!CL:0000738;8.14e-13;136!CL:0000226;5.18e-12;3!CL:0000842;5.18e-12;3!CL:0000988;8.27e-09;177!CL:0000771;1.21e-08;2 | |ontology_enrichment_celltype_v019=CL:0000860;4.36e-95;33!CL:0002057;4.36e-95;33!CL:0000473;4.66e-67;39!CL:0000234;4.66e-67;39!CL:0000576;4.94e-61;48!CL:0000766;6.60e-46;69!CL:0002393;1.34e-23;6!CL:0002397;1.34e-23;6!CL:0000094;4.36e-23;8!CL:0000763;6.18e-20;100!CL:0002087;7.71e-17;104!CL:0000081;1.55e-16;11!CL:0000767;6.35e-13;3!CL:0000738;8.14e-13;136!CL:0000226;5.18e-12;3!CL:0000842;5.18e-12;3!CL:0000988;8.27e-09;177!CL:0000771;1.21e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-117,42;CL:0002057,1.32e-117,42;CL:0000473,7.43e-102,48;CL:0000234,7.43e-102,48;CL:0000766,1.58e-93,72;CL:0002009,1.68e-81,61;CL:0002194,8.49e-80,59;CL:0000576,8.49e-80,59;CL:0000040,8.49e-80,59;CL:0000559,8.49e-80,59;CL:0000557,1.50e-73,67;CL:0000839,1.41e-70,66;CL:0000763,1.12e-62,108;CL:0000049,1.12e-62,108;CL:0000738,1.30e-55,136;CL:0000037,2.13e-45,168;CL:0002087,1.93e-44,115;CL:0000988,1.29e-42,177;CL:0002032,4.29e-39,161;CL:0000837,4.29e-39,161;CL:0002031,1.47e-37,120;CL:0000094,4.36e-23,8;CL:0000081,1.55e-16,11;CL:0000134,1.80e-16,354;CL:0002320,5.83e-16,361;CL:0002393,1.63e-15,9;CL:0002397,1.63e-15,9;CL:0000219,3.69e-14,386;CL:0000034,5.59e-13,441;CL:0000767,6.23e-13,3;CL:0000226,4.53e-12,3;CL:0000842,4.53e-12,3;CL:0000048,5.90e-12,427;CL:0000723,1.19e-11,433;CL:0000771,1.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-87;42!CL:0000049;3.25e-18;108 | |ontology_enrichment_development_v019=CL:0002057;2.17e-87;42!CL:0000049;3.25e-18;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.04e-55!80;UBERON:0002390!1.63e-50!102;UBERON:0003061!1.63e-50!102;UBERON:0001474!4.49e-50!86;UBERON:0002193!1.03e-44!112;UBERON:0004765!1.15e-40!101;UBERON:0001434!1.15e-40!101;UBERON:0002405!2.27e-37!115;UBERON:0002204!1.84e-20!167;UBERON:0002384!3.03e-19!375;UBERON:0003081!3.83e-18!216 | |ontology_enrichment_uberon=UBERON:0002371!8.04e-55!80;UBERON:0002390!1.63e-50!102;UBERON:0003061!1.63e-50!102;UBERON:0001474!4.49e-50!86;UBERON:0002193!1.03e-44!112;UBERON:0004765!1.15e-40!101;UBERON:0001434!1.15e-40!101;UBERON:0002405!2.27e-37!115;UBERON:0002204!1.84e-20!167;UBERON:0002384!3.03e-19!375;UBERON:0003081!3.83e-18!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.34e-67,76;UBERON:0001474,4.42e-62,82;UBERON:0002390,1.01e-59,98;UBERON:0003061,1.01e-59,98;UBERON:0004765,7.44e-56,90;UBERON:0002405,8.58e-54,93;UBERON:0002193,2.09e-53,108;UBERON:0001434,1.86e-49,100;UBERON:0002204,3.09e-26,167;UBERON:0003081,2.83e-24,203;UBERON:0002384,2.90e-15,371;UBERON:0000926,2.00e-12,315;UBERON:0004120,2.00e-12,315;UBERON:0006603,2.00e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,12.5876568591649,4.98978217526377,13.3141866051825,0,0,0,0,0.142169232487422,1.76160263600908,32.6857291033808,26.2713226185886,16.7098370451206,0,0,0,0.872389432677388,1.51150377475524,0.970336244751265,6.0431549595478,7.81218987241469,4.95530193432166,23.8784685627385,20.7490172288572,28.3778675866302,14.1345729102014,10.3277549373412,10.8341189275473,5.08254316765033,3.547779950752,6.74170453335254,53.8707650572789,44.9300637906531,46.67161018333,3.95821560224059,3.59034583718937,2.55734850319616,16.2517173632007,17.0215567407342,23.0444232128363,7.03496262718881,5.73631210262222,13.4657083717172,9.6863920421339,15.4676607114777,18.6712808590122,1.69004229049553,2.12604299965044,1.46761051855863,2.2465726229299,0.600707571366025,1.12507910687956,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,5.60508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,2.24702107184155,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,4.96142661882819,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,12.5876568591649,4.98978217526377,13.3141866051825,0,0,0,0,0.142169232487422,1.76160263600908,32.6857291033808,26.2713226185886,16.7098370451206,0,0,0,0.872389432677388,1.51150377475524,0.970336244751265,6.0431549595478,7.81218987241469,4.95530193432166,23.8784685627385,20.7490172288572,28.3778675866302,14.1345729102014,10.3277549373412,10.8341189275473,5.08254316765033,3.547779950752,6.74170453335254,53.8707650572789,44.9300637906531,46.67161018333,3.95821560224059,3.59034583718937,2.55734850319616,16.2517173632007,17.0215567407342,23.0444232128363,7.03496262718881,5.73631210262222,13.4657083717172,9.6863920421339,15.4676607114777,18.6712808590122,1.69004229049553,2.12604299965044,1.46761051855863,2.2465726229299,0.600707571366025,1.12507910687956,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,5.60508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.385029108839245,0,0,0,0,0,2.24702107184155,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,4.96142661882819,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr12:11899098..11899120,- | |short_description=p@chr12:11899098..11899120,- | ||
}} | }} |
Latest revision as of 05:35, 24 July 2015
Short description: | p@chr12:11899098..11899120, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11899098..11899120, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.34e-67 | 76 |
bone element | 4.42e-62 | 82 |
hematopoietic system | 1.01e-59 | 98 |
blood island | 1.01e-59 | 98 |
skeletal element | 7.44e-56 | 90 |
immune system | 8.58e-54 | 93 |
hemolymphoid system | 2.09e-53 | 108 |
skeletal system | 1.86e-49 | 100 |
musculoskeletal system | 3.09e-26 | 167 |
lateral plate mesoderm | 2.83e-24 | 203 |
connective tissue | 2.90e-15 | 371 |
mesoderm | 2.00e-12 | 315 |
mesoderm-derived structure | 2.00e-12 | 315 |
presumptive mesoderm | 2.00e-12 | 315 |