FFCP PHASE1:Hg19::chr17:74547203..74547217,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_uc002jrv.1_5end | |association_with_transcript=-35bp_to_uc002jrv.1_5end | ||
|cluster_id=chr17:74547203..74547217,- | |||
|description=CAGE_peak_7_at_CYGB_5end | |description=CAGE_peak_7_at_CYGB_5end | ||
|id=chr17:74547203..74547217,- | |id=chr17:74547203..74547217,- | ||
|ontology_enrichment_celltype=CL:0002368!3.64e-11!13;CL:0002076!4.64e-10!43;CL:0000223!7.28e-09!59;CL:0002159!1.40e-08!13;CL:0002202!6.18e-07!9;CL:0002632!6.18e-07!9;CL:0000066!6.67e-07!254 | |ontology_enrichment_celltype=CL:0002368!3.64e-11!13;CL:0002076!4.64e-10!43;CL:0000223!7.28e-09!59;CL:0002159!1.40e-08!13;CL:0002202!6.18e-07!9;CL:0002632!6.18e-07!9;CL:0000066!6.67e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002368;5.79e-22;13!CL:0000244;3.22e-16;4!CL:0000731;3.22e-16;4!CL:0002076;2.64e-15;42!CL:0002202;2.47e-14;9!CL:0002632;2.47e-14;9!CL:0002328;5.93e-12;3!CL:0000307;1.25e-11;3!CL:0002159;4.34e-09;14!CL:0000317;9.20e-09;2!CL:1000448;9.20e-09;2!CL:0002308;9.20e-09;2!CL:0002140;9.20e-09;2!CL:0000622;3.47e-07;5!CL:0000362;6.69e-07;9 | |ontology_enrichment_celltype_v019=CL:0002368;5.79e-22;13!CL:0000244;3.22e-16;4!CL:0000731;3.22e-16;4!CL:0002076;2.64e-15;42!CL:0002202;2.47e-14;9!CL:0002632;2.47e-14;9!CL:0002328;5.93e-12;3!CL:0000307;1.25e-11;3!CL:0002159;4.34e-09;14!CL:0000317;9.20e-09;2!CL:1000448;9.20e-09;2!CL:0002308;9.20e-09;2!CL:0002140;9.20e-09;2!CL:0000622;3.47e-07;5!CL:0000362;6.69e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.74e-22,13;CL:0000223,1.83e-20,58;CL:0002076,1.47e-18,42;CL:0000244,3.17e-16,4;CL:0000731,3.17e-16,4;CL:0002202,2.50e-14,9;CL:0002632,2.50e-14,9;CL:0002328,5.72e-12,3;CL:0000066,7.35e-12,253;CL:0000068,1.32e-11,3;CL:0000069,1.32e-11,3;CL:0000307,1.32e-11,3;CL:0000377,1.32e-11,3;CL:0002321,4.79e-10,250;CL:0002159,4.25e-09,14;CL:0000317,8.87e-09,2;CL:1000448,8.87e-09,2;CL:0002308,8.87e-09,2;CL:0002140,8.87e-09,2;CL:0000622,3.06e-07,5;CL:0000362,6.49e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.84e-12;58!CL:0000377;1.25e-11;3 | |ontology_enrichment_development_v019=CL:0000223;1.84e-12;58!CL:0000377;1.25e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-13!169;UBERON:0000925!2.26e-13!169;UBERON:0006595!2.26e-13!169;UBERON:0001004!5.37e-10!72;UBERON:0000475!2.45e-09!365;UBERON:0000466!3.85e-09!126;UBERON:0001007!6.21e-09!155;UBERON:0001555!6.21e-09!155;UBERON:0007026!6.21e-09!155;UBERON:0009569!6.55e-09!113;UBERON:0005911!7.91e-09!82;UBERON:0000065!1.61e-08!53;UBERON:0005178!3.31e-08!34;UBERON:0002224!3.31e-08!34;UBERON:0004921!5.05e-08!129;UBERON:0004185!5.05e-08!129;UBERON:0000464!5.41e-08!104;UBERON:0007196!6.39e-08!14;UBERON:0001558!6.39e-08!14;UBERON:0005181!8.21e-08!35;UBERON:0005153!6.60e-07!37;UBERON:0005177!7.09e-07!107;UBERON:0002100!9.53e-07!216 | |ontology_enrichment_uberon=UBERON:0004119!2.26e-13!169;UBERON:0000925!2.26e-13!169;UBERON:0006595!2.26e-13!169;UBERON:0001004!5.37e-10!72;UBERON:0000475!2.45e-09!365;UBERON:0000466!3.85e-09!126;UBERON:0001007!6.21e-09!155;UBERON:0001555!6.21e-09!155;UBERON:0007026!6.21e-09!155;UBERON:0009569!6.55e-09!113;UBERON:0005911!7.91e-09!82;UBERON:0000065!1.61e-08!53;UBERON:0005178!3.31e-08!34;UBERON:0002224!3.31e-08!34;UBERON:0004921!5.05e-08!129;UBERON:0004185!5.05e-08!129;UBERON:0000464!5.41e-08!104;UBERON:0007196!6.39e-08!14;UBERON:0001558!6.39e-08!14;UBERON:0005181!8.21e-08!35;UBERON:0005153!6.60e-07!37;UBERON:0005177!7.09e-07!107;UBERON:0002100!9.53e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.62e-13;5!UBERON:0004815;5.93e-12;3!UBERON:0002031;5.93e-12;3!UBERON:0007196;4.17e-11;15!UBERON:0001558;4.17e-11;15!UBERON:0000486;7.14e-11;12!UBERON:0005910;8.23e-11;6!UBERON:0005178;4.17e-10;34!UBERON:0002224;4.17e-10;34!UBERON:0000065;6.80e-09;44!UBERON:0002419;9.20e-09;2!UBERON:0007771;9.20e-09;2!UBERON:0003297;9.20e-09;2!UBERON:0001821;9.20e-09;2!UBERON:0003487;9.20e-09;2!UBERON:0001820;9.20e-09;2!UBERON:0005181;1.60e-08;35!UBERON:0003126;1.81e-08;7!UBERON:0001005;1.81e-08;7!UBERON:0002185;2.52e-07;5!UBERON:0005911;8.35e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000365;5.62e-13;5!UBERON:0004815;5.93e-12;3!UBERON:0002031;5.93e-12;3!UBERON:0007196;4.17e-11;15!UBERON:0001558;4.17e-11;15!UBERON:0000486;7.14e-11;12!UBERON:0005910;8.23e-11;6!UBERON:0005178;4.17e-10;34!UBERON:0002224;4.17e-10;34!UBERON:0000065;6.80e-09;44!UBERON:0002419;9.20e-09;2!UBERON:0007771;9.20e-09;2!UBERON:0003297;9.20e-09;2!UBERON:0001821;9.20e-09;2!UBERON:0003487;9.20e-09;2!UBERON:0001820;9.20e-09;2!UBERON:0005181;1.60e-08;35!UBERON:0003126;1.81e-08;7!UBERON:0001005;1.81e-08;7!UBERON:0002185;2.52e-07;5!UBERON:0005911;8.35e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.54e-13,5;UBERON:0004815,5.72e-12,3;UBERON:0002031,5.72e-12,3;UBERON:0004119,6.32e-12,160;UBERON:0000925,6.32e-12,160;UBERON:0006595,6.32e-12,160;UBERON:0007196,4.27e-11,15;UBERON:0001558,4.27e-11,15;UBERON:0005910,8.14e-11,6;UBERON:0005178,1.65e-10,34;UBERON:0002224,1.65e-10,34;UBERON:0005911,3.68e-10,82;UBERON:0005181,3.81e-10,35;UBERON:0002419,8.87e-09,2;UBERON:0007771,8.87e-09,2;UBERON:0003297,8.87e-09,2;UBERON:0001821,8.87e-09,2;UBERON:0003487,8.87e-09,2;UBERON:0001820,8.87e-09,2;UBERON:0005089,8.87e-09,2;UBERON:0005088,8.87e-09,2;UBERON:0001004,1.03e-08,74;UBERON:0000065,1.53e-08,54;UBERON:0003126,1.91e-08,7;UBERON:0001005,1.91e-08,7;UBERON:0008947,1.59e-07,38;UBERON:0003258,1.59e-07,38;UBERON:0002185,2.47e-07,5;UBERON:0001041,6.73e-07,87 | |||
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| ||
|short_description=p7@CYGB | |short_description=p7@CYGB | ||
}} | }} |
Latest revision as of 15:47, 17 September 2015
Short description: | p7@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.74e-22 | 13 |
endodermal cell | 1.83e-20 | 58 |
endo-epithelial cell | 1.47e-18 | 42 |
transitional epithelial cell | 3.17e-16 | 4 |
urothelial cell | 3.17e-16 | 4 |
epithelial cell of tracheobronchial tree | 2.50e-14 | 9 |
epithelial cell of lower respiratory tract | 2.50e-14 | 9 |
bronchial epithelial cell | 5.72e-12 | 3 |
epithelial cell | 7.35e-12 | 253 |
duct epithelial cell | 1.32e-11 | 3 |
branched duct epithelial cell | 1.32e-11 | 3 |
tracheal epithelial cell | 1.32e-11 | 3 |
tracheoblast | 1.32e-11 | 3 |
embryonic cell | 4.79e-10 | 250 |
general ecto-epithelial cell | 4.25e-09 | 14 |
sebum secreting cell | 8.87e-09 | 2 |
epithelial cell of sweat gland | 8.87e-09 | 2 |
epithelial cell of skin gland | 8.87e-09 | 2 |
acinar cell of sebaceous gland | 8.87e-09 | 2 |
acinar cell | 3.06e-07 | 5 |
epidermal cell | 6.49e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.54e-13 | 5 |
lower respiratory tract epithelium | 5.72e-12 | 3 |
epithelium of bronchus | 5.72e-12 | 3 |
endoderm-derived structure | 6.32e-12 | 160 |
endoderm | 6.32e-12 | 160 |
presumptive endoderm | 6.32e-12 | 160 |
tracheobronchial tree | 4.27e-11 | 15 |
lower respiratory tract | 4.27e-11 | 15 |
transitional epithelium | 8.14e-11 | 6 |
thoracic cavity element | 1.65e-10 | 34 |
thoracic cavity | 1.65e-10 | 34 |
endo-epithelium | 3.68e-10 | 82 |
thoracic segment organ | 3.81e-10 | 35 |
skin gland | 8.87e-09 | 2 |
epidermis gland | 8.87e-09 | 2 |
gland of integumental system | 8.87e-09 | 2 |
sebaceous gland | 8.87e-09 | 2 |
skin sebaceous gland | 8.87e-09 | 2 |
sweat gland | 8.87e-09 | 2 |
sweat gland placode | 8.87e-09 | 2 |
sebaceous gland placode | 8.87e-09 | 2 |
respiratory system | 1.03e-08 | 74 |
respiratory tract | 1.53e-08 | 54 |
trachea | 1.91e-08 | 7 |
respiratory airway | 1.91e-08 | 7 |
respiratory primordium | 1.59e-07 | 38 |
endoderm of foregut | 1.59e-07 | 38 |
bronchus | 2.47e-07 | 5 |
foregut | 6.73e-07 | 87 |