FFCP PHASE1:Hg19::chr7:114562143..114562159,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29969 | |EntrezGene=29969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28870 | |HGNC=28870 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1T7 | |UniProt=Q9P1T7 | ||
|association_with_transcript=-49bp_to_ENST00000257724,ENST00000393486,NM_001166345,NM_001166346,NM_199072,uc003vhf.2_5end | |association_with_transcript=-49bp_to_ENST00000257724,ENST00000393486,NM_001166345,NM_001166346,NM_199072,uc003vhf.2_5end | ||
|cluster_id=chr7:114562143..114562159,+ | |||
|description=CAGE_peak_5_at_MDFIC_5end | |description=CAGE_peak_5_at_MDFIC_5end | ||
|id=chr7:114562143..114562159,+ | |id=chr7:114562143..114562159,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.26e-17!180;CL:0000057!1.16e-11!75;CL:0000136!8.25e-10!15;CL:0000048!1.63e-09!430;CL:0000680!1.23e-08!57;CL:0000056!1.23e-08!57;CL:0000355!1.23e-08!57;CL:0000723!1.31e-08!436;CL:0000183!3.89e-08!59;CL:0000187!6.09e-08!54;CL:0002371!8.82e-08!591;CL:0000034!1.50e-07!444 | |ontology_enrichment_celltype=CL:0000055!3.26e-17!180;CL:0000057!1.16e-11!75;CL:0000136!8.25e-10!15;CL:0000048!1.63e-09!430;CL:0000680!1.23e-08!57;CL:0000056!1.23e-08!57;CL:0000355!1.23e-08!57;CL:0000723!1.31e-08!436;CL:0000183!3.89e-08!59;CL:0000187!6.09e-08!54;CL:0002371!8.82e-08!591;CL:0000034!1.50e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.33e-10;13!CL:0000349;1.71e-07;19 | |ontology_enrichment_celltype_v019=CL:0000136;7.33e-10;13!CL:0000349;1.71e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.24e-12,76;CL:0000048,4.02e-11,427;CL:0000136,1.92e-10,15;CL:0000723,3.19e-10,433;CL:0000034,4.41e-09,441;CL:0000680,1.20e-08,58;CL:0000056,1.20e-08,58;CL:0000355,1.20e-08,58;CL:0000187,6.46e-08,55;CL:0002320,2.36e-07,361;CL:0000349,2.82e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.75e-11!83;UBERON:0002329!4.75e-11!83;UBERON:0003077!4.75e-11!83;UBERON:0003059!4.75e-11!83;UBERON:0007282!4.75e-11!83;UBERON:0009618!4.75e-11!83;UBERON:0007285!4.75e-11!83;UBERON:0000926!9.78e-11!448;UBERON:0004120!9.78e-11!448;UBERON:0006603!9.78e-11!448;UBERON:0002100!4.21e-10!216;UBERON:0005256!1.18e-09!143;UBERON:0001134!5.50e-09!61;UBERON:0002036!5.50e-09!61;UBERON:0003082!5.50e-09!61;UBERON:0004290!8.49e-09!70;UBERON:0002385!9.49e-09!63;UBERON:0001015!9.49e-09!63;UBERON:0000383!9.49e-09!63;UBERON:0000486!3.31e-08!82;UBERON:0002204!1.11e-07!167;UBERON:0000468!1.35e-07!659;UBERON:0001013!3.26e-07!14;UBERON:0000479!5.55e-07!787;UBERON:0003104!8.60e-07!238;UBERON:0009142!8.60e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!4.75e-11!83;UBERON:0002329!4.75e-11!83;UBERON:0003077!4.75e-11!83;UBERON:0003059!4.75e-11!83;UBERON:0007282!4.75e-11!83;UBERON:0009618!4.75e-11!83;UBERON:0007285!4.75e-11!83;UBERON:0000926!9.78e-11!448;UBERON:0004120!9.78e-11!448;UBERON:0006603!9.78e-11!448;UBERON:0002100!4.21e-10!216;UBERON:0005256!1.18e-09!143;UBERON:0001134!5.50e-09!61;UBERON:0002036!5.50e-09!61;UBERON:0003082!5.50e-09!61;UBERON:0004290!8.49e-09!70;UBERON:0002385!9.49e-09!63;UBERON:0001015!9.49e-09!63;UBERON:0000383!9.49e-09!63;UBERON:0000486!3.31e-08!82;UBERON:0002204!1.11e-07!167;UBERON:0000468!1.35e-07!659;UBERON:0001013!3.26e-07!14;UBERON:0000479!5.55e-07!787;UBERON:0003104!8.60e-07!238;UBERON:0009142!8.60e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.17e-08;14!UBERON:0002385;2.62e-07;31!UBERON:0001015;2.62e-07;31!UBERON:0000383;2.62e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001013;9.17e-08;14!UBERON:0002385;2.62e-07;31!UBERON:0001015;2.62e-07;31!UBERON:0000383;2.62e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.91e-11,315;UBERON:0004120,1.91e-11,315;UBERON:0006603,1.91e-11,315;UBERON:0002100,1.57e-09,199;UBERON:0007503,3.64e-09,78;UBERON:0001134,4.98e-09,62;UBERON:0002036,4.98e-09,62;UBERON:0003082,4.98e-09,62;UBERON:0003104,5.46e-09,160;UBERON:0009142,5.46e-09,160;UBERON:0002329,7.15e-09,71;UBERON:0003059,7.15e-09,71;UBERON:0007282,7.15e-09,71;UBERON:0004290,7.15e-09,71;UBERON:0009618,7.15e-09,71;UBERON:0007524,1.11e-08,73;UBERON:0002385,1.34e-08,64;UBERON:0001015,1.34e-08,64;UBERON:0000383,1.34e-08,64;UBERON:0003077,1.83e-08,72;UBERON:0007285,1.83e-08,72;UBERON:0002204,2.02e-08,167;UBERON:0005256,2.71e-08,122;UBERON:0001013,1.19e-07,14;UBERON:0000486,1.27e-07,83;UBERON:0002384,1.44e-07,371 | |||
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| ||
|short_description=p5@MDFIC | |short_description=p5@MDFIC | ||
}} | }} |
Latest revision as of 06:18, 25 September 2015
Short description: | p5@MDFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MDFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000257724, ENST00000393486, NM_001166345, NM_001166346, NM_199072, uc003vhf.2_5end |
EntrezGene: | MDFIC |
HGNC: | 28870 |
UniProt: | Q9P1T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.24e-12 | 76 |
multi fate stem cell | 4.02e-11 | 427 |
fat cell | 1.92e-10 | 15 |
somatic stem cell | 3.19e-10 | 433 |
stem cell | 4.41e-09 | 441 |
muscle precursor cell | 1.20e-08 | 58 |
myoblast | 1.20e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-08 | 58 |
muscle cell | 6.46e-08 | 55 |
connective tissue cell | 2.36e-07 | 361 |
extraembryonic cell | 2.82e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.91e-11 | 315 |
mesoderm-derived structure | 1.91e-11 | 315 |
presumptive mesoderm | 1.91e-11 | 315 |
trunk | 1.57e-09 | 199 |
epithelial vesicle | 3.64e-09 | 78 |
skeletal muscle tissue | 4.98e-09 | 62 |
striated muscle tissue | 4.98e-09 | 62 |
myotome | 4.98e-09 | 62 |
mesenchyme | 5.46e-09 | 160 |
entire embryonic mesenchyme | 5.46e-09 | 160 |
somite | 7.15e-09 | 71 |
presomitic mesoderm | 7.15e-09 | 71 |
presumptive segmental plate | 7.15e-09 | 71 |
dermomyotome | 7.15e-09 | 71 |
trunk paraxial mesoderm | 7.15e-09 | 71 |
dense mesenchyme tissue | 1.11e-08 | 73 |
muscle tissue | 1.34e-08 | 64 |
musculature | 1.34e-08 | 64 |
musculature of body | 1.34e-08 | 64 |
paraxial mesoderm | 1.83e-08 | 72 |
presumptive paraxial mesoderm | 1.83e-08 | 72 |
musculoskeletal system | 2.02e-08 | 167 |
trunk mesenchyme | 2.71e-08 | 122 |
adipose tissue | 1.19e-07 | 14 |
multilaminar epithelium | 1.27e-07 | 83 |
connective tissue | 1.44e-07 | 371 |