FFCP PHASE1:Hg19::chr19:59055602..59055605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10155 | |EntrezGene=10155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16384 | |HGNC=16384 | ||
|TSSclassifier=strong | |||
|UniProt=Q13263 | |UniProt=Q13263 | ||
|association_with_transcript=-230bp_to_ENST00000253024,ENST00000341753,NM_005762,uc002qtg.1,uc010eut.1_5end | |association_with_transcript=-230bp_to_ENST00000253024,ENST00000341753,NM_005762,uc002qtg.1,uc010eut.1_5end | ||
|cluster_id=chr19:59055602..59055605,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_17_at_TRIM28_5end | |description=CAGE_peak_17_at_TRIM28_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000860!3.84e-08!45;CL:0002057!7.61e-08!42 | |ontology_enrichment_celltype=CL:0000860!3.84e-08!45;CL:0002057!7.61e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.46e-45;2!CL:0001016;4.46e-45;2!CL:0000228;2.93e-23;1!CL:0002372;2.93e-23;1!CL:0000319;2.93e-23;1!CL:0000453;9.89e-19;5!CL:0000860;5.97e-16;33!CL:0002057;5.97e-16;33!CL:0000840;8.71e-16;5!CL:0000473;7.22e-13;39!CL:0000234;7.22e-13;39!CL:0000159;2.45e-12;2!CL:0000990;7.39e-11;8!CL:0000451;4.70e-09;10!CL:0000576;7.75e-07;48!CL:0000056;8.37e-07;4!CL:0000737;8.37e-07;4 | |ontology_enrichment_celltype_v019=CL:0001014;4.46e-45;2!CL:0001016;4.46e-45;2!CL:0000228;2.93e-23;1!CL:0002372;2.93e-23;1!CL:0000319;2.93e-23;1!CL:0000453;9.89e-19;5!CL:0000860;5.97e-16;33!CL:0002057;5.97e-16;33!CL:0000840;8.71e-16;5!CL:0000473;7.22e-13;39!CL:0000234;7.22e-13;39!CL:0000159;2.45e-12;2!CL:0000990;7.39e-11;8!CL:0000451;4.70e-09;10!CL:0000576;7.75e-07;48!CL:0000056;8.37e-07;4!CL:0000737;8.37e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.55e-45,2;CL:0001016,2.55e-45,2;CL:0000319,1.34e-23,1;CL:0000228,2.10e-23,1;CL:0002372,2.10e-23,1;CL:0000453,7.92e-19,5;CL:0002009,3.04e-17,61;CL:0000840,7.23e-16,5;CL:0001029,7.23e-16,5;CL:0000557,1.02e-15,67;CL:0000860,3.41e-13,42;CL:0002057,3.41e-13,42;CL:0000159,1.65e-12,2;CL:0000473,1.44e-11,48;CL:0000234,1.44e-11,48;CL:0000990,6.54e-11,8;CL:0000763,9.31e-10,108;CL:0000049,9.31e-10,108;CL:0002194,2.75e-09,59;CL:0000576,2.75e-09,59;CL:0000040,2.75e-09,59;CL:0000559,2.75e-09,59;CL:0000451,4.25e-09,10;CL:0002031,9.05e-09,120;CL:0000839,2.49e-08,66;CL:0000738,1.02e-07,136;CL:0000766,1.18e-07,72;CL:0000737,7.70e-07,4;CL:0000515,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-09;42!CL:0000515;8.37e-07;4 | |ontology_enrichment_development_v019=CL:0002057;1.71e-09;42!CL:0000515;8.37e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.93e-23;1 | |ontology_enrichment_disease_v019=DOID:3030;2.93e-23;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,1.34e-23,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.17e-14,76;UBERON:0001474,7.34e-13,82;UBERON:0004765,1.02e-11,90;UBERON:0002405,2.43e-11,93;UBERON:0002390,9.25e-11,98;UBERON:0003061,9.25e-11,98;UBERON:0001434,1.52e-10,100;UBERON:0002193,9.31e-10,108;UBERON:0002204,3.70e-08,167 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,1.18241114944293,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0,0.449446968890169,0,0,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,4.27450393947851,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0,0,1.18241114944293,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0,0.449446968890169,0,0,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,1.24564449799115,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,4.27450393947851,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0.617602894321944,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,1.72041036127604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p17@TRIM28 | |short_description=p17@TRIM28 | ||
}} | }} |
Latest revision as of 08:14, 20 September 2015
Short description: | p17@TRIM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TRIM28_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -230bp_to_ENST00000253024, ENST00000341753, NM_005762, uc002qtg.1, uc010eut.1_5end |
EntrezGene: | TRIM28 |
HGNC: | 16384 |
UniProt: | Q13263 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.55e-45 | 2 |
immature CD1a-positive Langerhans cell | 2.55e-45 | 2 |
mucus secreting cell | 1.34e-23 | 1 |
multinucleate cell | 2.10e-23 | 1 |
myotube | 2.10e-23 | 1 |
Langerhans cell | 7.92e-19 | 5 |
macrophage dendritic cell progenitor | 3.04e-17 | 61 |
immature conventional dendritic cell | 7.23e-16 | 5 |
common dendritic progenitor | 7.23e-16 | 5 |
granulocyte monocyte progenitor cell | 1.02e-15 | 67 |
classical monocyte | 3.41e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-13 | 42 |
seromucus secreting cell | 1.65e-12 | 2 |
defensive cell | 1.44e-11 | 48 |
phagocyte | 1.44e-11 | 48 |
conventional dendritic cell | 6.54e-11 | 8 |
myeloid cell | 9.31e-10 | 108 |
common myeloid progenitor | 9.31e-10 | 108 |
monopoietic cell | 2.75e-09 | 59 |
monocyte | 2.75e-09 | 59 |
monoblast | 2.75e-09 | 59 |
promonocyte | 2.75e-09 | 59 |
dendritic cell | 4.25e-09 | 10 |
hematopoietic lineage restricted progenitor cell | 9.05e-09 | 120 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
leukocyte | 1.02e-07 | 136 |
myeloid leukocyte | 1.18e-07 | 72 |
striated muscle cell | 7.70e-07 | 4 |
skeletal muscle myoblast | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.17e-14 | 76 |
bone element | 7.34e-13 | 82 |
skeletal element | 1.02e-11 | 90 |
immune system | 2.43e-11 | 93 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
skeletal system | 1.52e-10 | 100 |
hemolymphoid system | 9.31e-10 | 108 |
musculoskeletal system | 3.70e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.34e-23 | 1 |