FFCP PHASE1:Hg19::chr7:119434164..119434168,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:119434164..119434168,- | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_at_chr7:119434164..119434168,- | |description=CAGE_peak_at_chr7:119434164..119434168,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.35e-20!7;CL:0000586!3.35e-20!7;CL:0000181!2.50e-07!12;CL:0000417!2.50e-07!12;CL:0000668!2.50e-07!12;CL:0000414!2.50e-07!12;CL:0000412!2.50e-07!12;CL:0000182!2.50e-07!12 | |ontology_enrichment_celltype=CL:0000039!3.35e-20!7;CL:0000586!3.35e-20!7;CL:0000181!2.50e-07!12;CL:0000417!2.50e-07!12;CL:0000668!2.50e-07!12;CL:0000414!2.50e-07!12;CL:0000412!2.50e-07!12;CL:0000182!2.50e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.03e-24;7!CL:0000586;9.03e-24;7!CL:0000054;2.72e-10;2!CL:0000137;2.72e-10;2!CL:0000092;2.72e-10;2 | |ontology_enrichment_celltype_v019=CL:0000039;9.03e-24;7!CL:0000586;9.03e-24;7!CL:0000054;2.72e-10;2!CL:0000137;2.72e-10;2!CL:0000092;2.72e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.04e-24,7;CL:0000586,9.04e-24,7;CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.28e-17;10!UBERON:0005564;7.28e-17;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.28e-17;10!UBERON:0005564;7.28e-17;10 | ||
|ontology_enrichment_disease=DOID:162!8.34e-20!235;DOID:14566!2.90e-19!239;DOID:1036!7.24e-18!8;DOID:3095!9.11e-12!22;DOID:2994!9.11e-12!22;DOID:0050687!2.87e-11!143;DOID:8692!1.26e-10!31;DOID:0050686!1.35e-10!137;DOID:1240!2.14e-10!39;DOID:305!4.01e-10!106;DOID:2531!1.91e-09!51;DOID:0060083!1.91e-09!51;DOID:0060085!3.17e-07!1;DOID:3165!3.17e-07!1;DOID:0060121!3.17e-07!1;DOID:2438!3.17e-07!1;DOID:4418!3.17e-07!1 | |ontology_enrichment_disease=DOID:162!8.34e-20!235;DOID:14566!2.90e-19!239;DOID:1036!7.24e-18!8;DOID:3095!9.11e-12!22;DOID:2994!9.11e-12!22;DOID:0050687!2.87e-11!143;DOID:8692!1.26e-10!31;DOID:0050686!1.35e-10!137;DOID:1240!2.14e-10!39;DOID:305!4.01e-10!106;DOID:2531!1.91e-09!51;DOID:0060083!1.91e-09!51;DOID:0060085!3.17e-07!1;DOID:3165!3.17e-07!1;DOID:0060121!3.17e-07!1;DOID:2438!3.17e-07!1;DOID:4418!3.17e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.32e-21;8!DOID:0060085;3.25e-19;1!DOID:3165;3.25e-19;1!DOID:0060121;3.25e-19;1!DOID:2438;3.25e-19;1!DOID:4418;3.25e-19;1!DOID:1240;3.89e-11;39!DOID:200;2.72e-10;2!DOID:4305;2.72e-10;2!DOID:2531;3.33e-10;51!DOID:0060083;3.33e-10;51!DOID:8692;5.33e-10;31!DOID:3095;5.26e-08;22!DOID:2994;5.26e-08;22 | |ontology_enrichment_disease_v019=DOID:1036;6.32e-21;8!DOID:0060085;3.25e-19;1!DOID:3165;3.25e-19;1!DOID:0060121;3.25e-19;1!DOID:2438;3.25e-19;1!DOID:4418;3.25e-19;1!DOID:1240;3.89e-11;39!DOID:200;2.72e-10;2!DOID:4305;2.72e-10;2!DOID:2531;3.33e-10;51!DOID:0060083;3.33e-10;51!DOID:8692;5.33e-10;31!DOID:3095;5.26e-08;22!DOID:2994;5.26e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,6.32e-21,8;DOID:0060085,3.25e-19,1;DOID:3165,3.25e-19,1;DOID:0060121,3.25e-19,1;DOID:2438,3.25e-19,1;DOID:4418,3.25e-19,1;DOID:2531,1.40e-12,51;DOID:0060083,1.40e-12,51;DOID:1240,1.20e-11,39;DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2;DOID:8692,1.10e-09,31;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:3095,5.26e-08,22;DOID:2994,5.26e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!6.34e-13!11;UBERON:0000473!8.30e-12!8;UBERON:0000989!6.38e-07!1;UBERON:0008811!6.38e-07!1;UBERON:0006258!6.38e-07!1;UBERON:0005876!6.38e-07!1;UBERON:0004874!6.38e-07!1;UBERON:0001282!8.49e-07!1;UBERON:0009842!8.49e-07!1;UBERON:0003704!8.49e-07!1;UBERON:0001171!8.49e-07!1;UBERON:0001172!8.49e-07!1 | |ontology_enrichment_uberon=UBERON:0003135!6.34e-13!11;UBERON:0000473!8.30e-12!8;UBERON:0000989!6.38e-07!1;UBERON:0008811!6.38e-07!1;UBERON:0006258!6.38e-07!1;UBERON:0005876!6.38e-07!1;UBERON:0004874!6.38e-07!1;UBERON:0001282!8.49e-07!1;UBERON:0009842!8.49e-07!1;UBERON:0003704!8.49e-07!1;UBERON:0001171!8.49e-07!1;UBERON:0001172!8.49e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.77e-21;8!UBERON:0003135;2.14e-15;11!UBERON:0000991;2.32e-08;21!UBERON:0003101;5.26e-08;22!UBERON:0000079;5.26e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.77e-21;8!UBERON:0003135;2.14e-15;11!UBERON:0000991;2.32e-08;21!UBERON:0003101;5.26e-08;22!UBERON:0000079;5.26e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.77e-21,8;UBERON:0003135,2.15e-15,11;UBERON:0000991,2.33e-08,21;UBERON:0009196,2.33e-08,21;UBERON:0009117,2.33e-08,21;UBERON:0005564,2.33e-08,21;UBERON:0004176,5.26e-08,22;UBERON:0003101,5.26e-08,22;UBERON:0000079,5.26e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,2.96343015813436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0.902382642468723,1.17637520590644,1.34257269580674,4.55408958538044,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0.64127056201227,0,0.19980960958213,0,0,7.03539491234055,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0.633492505057185,0.203977659483963,1.60330443159336,1.01084389488329,3.25919801080088,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,2.96343015813436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0.902382642468723,1.17637520590644,1.34257269580674,4.55408958538044,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,0.64127056201227,0,0.19980960958213,0,0,7.03539491234055,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0.633492505057185,0.203977659483963,1.60330443159336,1.01084389488329,3.25919801080088,0,0,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:119434164..119434168,- | |short_description=p@chr7:119434164..119434168,- | ||
}} | }} |
Latest revision as of 05:24, 31 July 2015
Short description: | p@chr7:119434164..119434168, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:119434164..119434168, - |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.04e-24 | 7 |
germ cell | 9.04e-24 | 7 |
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.77e-21 | 8 |
male reproductive organ | 2.15e-15 | 11 |
gonad | 2.33e-08 | 21 |
indifferent external genitalia | 2.33e-08 | 21 |
indifferent gonad | 2.33e-08 | 21 |
gonad primordium | 2.33e-08 | 21 |
external genitalia | 5.26e-08 | 22 |
male organism | 5.26e-08 | 22 |
male reproductive system | 5.26e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.32e-21 | 8 |
organ system benign neoplasm | 3.25e-19 | 1 |
skin benign neoplasm | 3.25e-19 | 1 |
integumentary system benign neoplasm | 3.25e-19 | 1 |
dermis tumor | 3.25e-19 | 1 |
cutaneous fibrous histiocytoma | 3.25e-19 | 1 |
hematologic cancer | 1.40e-12 | 51 |
immune system cancer | 1.40e-12 | 51 |
leukemia | 1.20e-11 | 39 |
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |
myeloid leukemia | 1.10e-09 | 31 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
germ cell and embryonal cancer | 5.26e-08 | 22 |
germ cell cancer | 5.26e-08 | 22 |