FFCP PHASE1:Hg19::chr20:2781623..2781635,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:2781623..2781635,-
|short_description=p5@CPXM1
|description=CAGE_peak_5_at_CPXM1_5end
|association_with_transcript=-331bp_to_NM_001184699,NM_019609_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56265 | |EntrezGene=56265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15771 | |HGNC=15771 | ||
|TSSclassifier=strong | |||
|UniProt=Q96SM3 | |UniProt=Q96SM3 | ||
|association_with_transcript=-331bp_to_NM_001184699,NM_019609_5end | |||
|cluster_id=chr20:2781623..2781635,- | |||
|description=CAGE_peak_5_at_CPXM1_5end | |||
|id=chr20:2781623..2781635,- | |||
|ontology_enrichment_celltype=CL:0002057!2.40e-10!42;CL:0000860!2.10e-09!45;CL:0000708!5.22e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000708;9.45e-22;3!CL:0002032;1.53e-16;1!CL:0000557;1.53e-16;1!CL:0002591;1.53e-16;1!CL:0000860;1.24e-13;33!CL:0002057;1.24e-13;33!CL:0000576;5.13e-12;48!CL:0000473;8.13e-12;39!CL:0000234;8.13e-12;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,9.47e-22,3;CL:0000860,3.01e-17,42;CL:0002057,3.01e-17,42;CL:0002591,2.63e-16,1;CL:0000473,4.82e-15,48;CL:0000234,4.82e-15,48;CL:0000557,1.17e-13,67;CL:0002194,5.97e-12,59;CL:0000576,5.97e-12,59;CL:0000040,5.97e-12,59;CL:0000559,5.97e-12,59;CL:0002009,1.50e-11,61;CL:0000839,1.18e-10,66;CL:0000766,9.68e-10,72;CL:0000763,2.85e-08,108;CL:0000049,2.85e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.72e-17;1!CL:0002057;1.50e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003210!5.22e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;9.45e-22;3!UBERON:0000078;6.17e-09;2!UBERON:0002012;6.17e-09;2!UBERON:0008886;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,9.47e-22,3;UBERON:0002371,5.45e-12,76;UBERON:0001474,4.46e-11,82;UBERON:0004765,4.81e-10,90;UBERON:0003124,7.00e-10,7;UBERON:0002405,1.06e-09,93;UBERON:0002390,3.54e-09,98;UBERON:0003061,3.54e-09,98;UBERON:0001434,5.55e-09,100;UBERON:0000078,8.09e-09,2;UBERON:0007497,8.09e-09,2;UBERON:0003643,8.09e-09,2;UBERON:0003504,8.09e-09,2;UBERON:0003469,8.09e-09,2;UBERON:0003496,8.09e-09,2;UBERON:0002012,8.09e-09,2;UBERON:0008886,8.09e-09,2;UBERON:0007303,8.09e-09,2;UBERON:0002061,8.09e-09,2;UBERON:0005432,8.09e-09,2;UBERON:0004363,8.09e-09,2;UBERON:0002193,2.85e-08,108 | |||
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| ||
|short_description=p5@CPXM1 | |||
}} | }} |
Latest revision as of 23:54, 24 September 2015
Short description: | p5@CPXM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CPXM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -331bp_to_NM_001184699, NM_019609_5end |
EntrezGene: | CPXM1 |
HGNC: | 15771 |
UniProt: | Q96SM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 9.47e-22 | 3 |
classical monocyte | 3.01e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-17 | 42 |
smooth muscle cell of the pulmonary artery | 2.63e-16 | 1 |
defensive cell | 4.82e-15 | 48 |
phagocyte | 4.82e-15 | 48 |
granulocyte monocyte progenitor cell | 1.17e-13 | 67 |
monopoietic cell | 5.97e-12 | 59 |
monocyte | 5.97e-12 | 59 |
monoblast | 5.97e-12 | 59 |
promonocyte | 5.97e-12 | 59 |
macrophage dendritic cell progenitor | 1.50e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.18e-10 | 66 |
myeloid leukocyte | 9.68e-10 | 72 |
myeloid cell | 2.85e-08 | 108 |
common myeloid progenitor | 2.85e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 9.47e-22 | 3 |
bone marrow | 5.45e-12 | 76 |
bone element | 4.46e-11 | 82 |
skeletal element | 4.81e-10 | 90 |
chorion | 7.00e-10 | 7 |
immune system | 1.06e-09 | 93 |
hematopoietic system | 3.54e-09 | 98 |
blood island | 3.54e-09 | 98 |
skeletal system | 5.55e-09 | 100 |
mixed ectoderm/mesoderm/endoderm-derived structure | 8.09e-09 | 2 |
developing epithelial placode | 8.09e-09 | 2 |
respiratory system arterial blood vessel | 8.09e-09 | 2 |
respiratory system blood vessel | 8.09e-09 | 2 |
respiratory system artery | 8.09e-09 | 2 |
head blood vessel | 8.09e-09 | 2 |
pulmonary artery | 8.09e-09 | 2 |
pulmonary vascular system | 8.09e-09 | 2 |
pharyngeal vasculature | 8.09e-09 | 2 |
truncus arteriosus | 8.09e-09 | 2 |
aortic sac | 8.09e-09 | 2 |
pharyngeal arch artery | 8.09e-09 | 2 |
hemolymphoid system | 2.85e-08 | 108 |