FFCP PHASE1:Hg19::chr4:100140393..100140409,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130 | |EntrezGene=130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=255 | |HGNC=255 | ||
|TSSclassifier=strong | |||
|UniProt=D6RH17,P28332,Q8IUN7 | |UniProt=D6RH17,P28332,Q8IUN7 | ||
|association_with_transcript=0bp_to_ENST00000394899,ENST00000508558,ENST00000513262,NM_000672,NM_001102470,uc003huo.2,uc003hup.3,uc010ile.2,uc011cef.1_5end | |association_with_transcript=0bp_to_ENST00000394899,ENST00000508558,ENST00000513262,NM_000672,NM_001102470,uc003huo.2,uc003hup.3,uc010ile.2,uc011cef.1_5end | ||
|cluster_id=chr4:100140393..100140409,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_ADH6_5end | |description=CAGE_peak_1_at_ADH6_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.95e-18!12;CL:0000417!1.95e-18!12;CL:0000668!1.95e-18!12;CL:0000414!1.95e-18!12;CL:0000412!1.95e-18!12;CL:0000182!1.95e-18!12;CL:0000223!1.33e-08!59 | |ontology_enrichment_celltype=CL:0000181!1.95e-18!12;CL:0000417!1.95e-18!12;CL:0000668!1.95e-18!12;CL:0000414!1.95e-18!12;CL:0000412!1.95e-18!12;CL:0000182!1.95e-18!12;CL:0000223!1.33e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.62e-27;12 | |ontology_enrichment_celltype_v019=CL:0000182;9.62e-27;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.95e-27,12;CL:0000223,3.27e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.88e-29;11!UBERON:0009497;2.21e-24;13!UBERON:0003104;1.06e-17;31!UBERON:0001041;2.66e-12;30!CL:0000223;9.89e-08;58 | |ontology_enrichment_development_v019=UBERON:0004161;4.88e-29;11!UBERON:0009497;2.21e-24;13!UBERON:0003104;1.06e-17;31!UBERON:0001041;2.66e-12;30!CL:0000223;9.89e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!3.75e-20!23;UBERON:0004921!2.94e-19!129;UBERON:0004185!2.94e-19!129;UBERON:0009497!2.12e-18!25;UBERON:0000015!2.12e-18!25;UBERON:0002423!2.12e-18!25;UBERON:0006235!2.12e-18!25;UBERON:0004161!2.12e-18!25;UBERON:0008835!8.16e-18!22;UBERON:0003894!8.16e-18!22;UBERON:0002107!1.60e-17!19;UBERON:0006925!1.60e-17!19;UBERON:0008836!1.60e-17!19;UBERON:0009856!1.69e-17!26;UBERON:0005057!2.52e-17!26;UBERON:0001007!5.83e-16!155;UBERON:0001555!5.83e-16!155;UBERON:0007026!5.83e-16!155;UBERON:0007499!2.25e-15!25;UBERON:0004119!5.65e-14!169;UBERON:0000925!5.65e-14!169;UBERON:0006595!5.65e-14!169;UBERON:0005409!1.83e-13!35;UBERON:0003929!4.36e-13!54;UBERON:0000160!6.73e-13!27;UBERON:0005172!8.28e-13!55;UBERON:0005173!8.28e-13!55;UBERON:0000077!2.44e-11!130;UBERON:0002417!3.64e-11!61;UBERON:0000916!3.64e-11!61;UBERON:0000059!5.34e-11!11;UBERON:0005911!8.39e-11!82;UBERON:0005177!3.18e-10!107;UBERON:0002368!3.30e-10!35;UBERON:0002365!6.66e-10!31;UBERON:0002330!6.66e-10!31;UBERON:0001155!1.07e-09!9;UBERON:0001041!3.72e-09!98;UBERON:0000949!7.13e-09!45;UBERON:0007023!1.52e-07!115;UBERON:0009569!1.67e-07!113;UBERON:0004907!9.62e-07!5 | |ontology_enrichment_uberon=UBERON:0009854!3.75e-20!23;UBERON:0004921!2.94e-19!129;UBERON:0004185!2.94e-19!129;UBERON:0009497!2.12e-18!25;UBERON:0000015!2.12e-18!25;UBERON:0002423!2.12e-18!25;UBERON:0006235!2.12e-18!25;UBERON:0004161!2.12e-18!25;UBERON:0008835!8.16e-18!22;UBERON:0003894!8.16e-18!22;UBERON:0002107!1.60e-17!19;UBERON:0006925!1.60e-17!19;UBERON:0008836!1.60e-17!19;UBERON:0009856!1.69e-17!26;UBERON:0005057!2.52e-17!26;UBERON:0001007!5.83e-16!155;UBERON:0001555!5.83e-16!155;UBERON:0007026!5.83e-16!155;UBERON:0007499!2.25e-15!25;UBERON:0004119!5.65e-14!169;UBERON:0000925!5.65e-14!169;UBERON:0006595!5.65e-14!169;UBERON:0005409!1.83e-13!35;UBERON:0003929!4.36e-13!54;UBERON:0000160!6.73e-13!27;UBERON:0005172!8.28e-13!55;UBERON:0005173!8.28e-13!55;UBERON:0000077!2.44e-11!130;UBERON:0002417!3.64e-11!61;UBERON:0000916!3.64e-11!61;UBERON:0000059!5.34e-11!11;UBERON:0005911!8.39e-11!82;UBERON:0005177!3.18e-10!107;UBERON:0002368!3.30e-10!35;UBERON:0002365!6.66e-10!31;UBERON:0002330!6.66e-10!31;UBERON:0001155!1.07e-09!9;UBERON:0001041!3.72e-09!98;UBERON:0000949!7.13e-09!45;UBERON:0007023!1.52e-07!115;UBERON:0009569!1.67e-07!113;UBERON:0004907!9.62e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.11e-26;17!UBERON:0002107;7.48e-26;19!UBERON:0006925;7.48e-26;19!UBERON:0005409;3.25e-24;22!UBERON:0002423;3.06e-23;25!UBERON:0000059;7.67e-16;11!UBERON:0002365;9.25e-15;31!UBERON:0002330;9.25e-15;31!UBERON:0004921;2.15e-14;33!UBERON:0001155;7.10e-14;9!UBERON:0001007;4.79e-13;81!UBERON:0002368;7.92e-13;33!UBERON:0005172;2.89e-10;52!UBERON:0005173;2.89e-10;52!UBERON:0000949;1.13e-09;43!UBERON:0002108;1.28e-09;4!UBERON:0004907;2.42e-09;5!UBERON:0002417;1.16e-07;58!UBERON:0000916;1.16e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0000160;5.11e-26;17!UBERON:0002107;7.48e-26;19!UBERON:0006925;7.48e-26;19!UBERON:0005409;3.25e-24;22!UBERON:0002423;3.06e-23;25!UBERON:0000059;7.67e-16;11!UBERON:0002365;9.25e-15;31!UBERON:0002330;9.25e-15;31!UBERON:0004921;2.15e-14;33!UBERON:0001155;7.10e-14;9!UBERON:0001007;4.79e-13;81!UBERON:0002368;7.92e-13;33!UBERON:0005172;2.89e-10;52!UBERON:0005173;2.89e-10;52!UBERON:0000949;1.13e-09;43!UBERON:0002108;1.28e-09;4!UBERON:0004907;2.42e-09;5!UBERON:0002417;1.16e-07;58!UBERON:0000916;1.16e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-26,17;UBERON:0002107,7.78e-26,19;UBERON:0006925,7.78e-26,19;UBERON:0008836,7.78e-26,19;UBERON:0009854,2.64e-25,23;UBERON:0005409,3.75e-25,25;UBERON:0009497,3.16e-23,25;UBERON:0000015,3.16e-23,25;UBERON:0002423,3.16e-23,25;UBERON:0006235,3.16e-23,25;UBERON:0004161,3.16e-23,25;UBERON:0009856,3.95e-22,26;UBERON:0008835,4.74e-22,22;UBERON:0003894,4.74e-22,22;UBERON:0004921,4.12e-21,118;UBERON:0007499,3.57e-19,25;UBERON:0001007,8.78e-18,145;UBERON:0001555,8.78e-18,145;UBERON:0007026,8.78e-18,145;UBERON:0000059,7.17e-16,11;UBERON:0003929,7.58e-16,54;UBERON:0005172,8.47e-16,54;UBERON:0005173,8.47e-16,54;UBERON:0004119,1.37e-15,160;UBERON:0000925,1.37e-15,160;UBERON:0006595,1.37e-15,160;UBERON:0002365,4.32e-15,31;UBERON:0002330,4.32e-15,31;UBERON:0002417,6.47e-14,60;UBERON:0000916,6.47e-14,60;UBERON:0001155,7.10e-14,9;UBERON:0002368,3.79e-13,35;UBERON:0005911,1.54e-12,82;UBERON:0000949,7.87e-12,45;UBERON:0005177,7.44e-11,101;UBERON:0011216,2.20e-10,223;UBERON:0002108,1.30e-09,4;UBERON:0004907,2.28e-09,5;UBERON:0002530,1.42e-08,59;UBERON:0001041,1.46e-08,87;UBERON:0009569,3.07e-08,112 | |||
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|short_description=p1@ADH6 | |short_description=p1@ADH6 | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p1@ADH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADH6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000394899, ENST00000508558, ENST00000513262, NM_000672, NM_001102470, uc003huo.2, uc003hup.3, uc010ile.2, uc011cef.1_5end |
EntrezGene: | ADH6 |
HGNC: | 255 |
UniProt: | D6RH17P28332Q8IUN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.95e-27 | 12 |
endodermal cell | 3.27e-12 | 58 |