FFCP PHASE1:Hg19::chr5:172195883..172195911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-226bp_to_AJ227912_5end | |association_with_transcript=-226bp_to_AJ227912_5end | ||
|cluster_id=chr5:172195883..172195911,- | |||
|coexpression_cluster_id=C250 | |coexpression_cluster_id=C250 | ||
|description=CAGE_peak_4_at_AJ227912_5end | |description=CAGE_peak_4_at_AJ227912_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.21e-23!42;CL:0000860!2.19e-20!45;CL:0000766!1.13e-13!76;CL:0000557!2.44e-10!71;CL:0002009!3.57e-10!65;CL:0000839!7.22e-10!70;CL:0002194!1.52e-09!63;CL:0000576!1.52e-09!63;CL:0000040!1.52e-09!63;CL:0000559!1.52e-09!63;CL:0000738!9.83e-08!140;CL:0002393!5.56e-07!9;CL:0002397!5.56e-07!9 | |ontology_enrichment_celltype=CL:0002057!1.21e-23!42;CL:0000860!2.19e-20!45;CL:0000766!1.13e-13!76;CL:0000557!2.44e-10!71;CL:0002009!3.57e-10!65;CL:0000839!7.22e-10!70;CL:0002194!1.52e-09!63;CL:0000576!1.52e-09!63;CL:0000040!1.52e-09!63;CL:0000559!1.52e-09!63;CL:0000738!9.83e-08!140;CL:0002393!5.56e-07!9;CL:0002397!5.56e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-26;33!CL:0002057;2.31e-26;33!CL:0000576;4.09e-20;48!CL:0000766;1.16e-18;69!CL:0000473;1.81e-17;39!CL:0000234;1.81e-17;39!CL:0002087;8.45e-10;104!CL:0002393;2.19e-09;6!CL:0002397;2.19e-09;6!CL:0000094;3.17e-09;8!CL:0000136;5.28e-07;13!CL:0000763;8.32e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.31e-26;33!CL:0002057;2.31e-26;33!CL:0000576;4.09e-20;48!CL:0000766;1.16e-18;69!CL:0000473;1.81e-17;39!CL:0000234;1.81e-17;39!CL:0002087;8.45e-10;104!CL:0002393;2.19e-09;6!CL:0002397;2.19e-09;6!CL:0000094;3.17e-09;8!CL:0000136;5.28e-07;13!CL:0000763;8.32e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.28e-40,42;CL:0002057,3.28e-40,42;CL:0000766,6.13e-34,72;CL:0000473,1.63e-33,48;CL:0000234,1.63e-33,48;CL:0000738,8.21e-29,136;CL:0000557,2.27e-26,67;CL:0000839,2.09e-25,66;CL:0002009,1.38e-24,61;CL:0002194,3.14e-24,59;CL:0000576,3.14e-24,59;CL:0000040,3.14e-24,59;CL:0000559,3.14e-24,59;CL:0002087,3.02e-22,115;CL:0002031,3.58e-22,120;CL:0000037,1.82e-19,168;CL:0000763,1.42e-18,108;CL:0000049,1.42e-18,108;CL:0002032,2.09e-18,161;CL:0000837,2.09e-18,161;CL:0000988,1.72e-17,177;CL:0002320,2.57e-13,361;CL:0000134,5.84e-13,354;CL:0002393,1.03e-12,9;CL:0002397,1.03e-12,9;CL:0000219,1.16e-09,386;CL:0000094,2.00e-09,8;CL:0000048,2.88e-08,427;CL:0000723,8.00e-08,433;CL:0000034,1.21e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-28;42 | |ontology_enrichment_development_v019=CL:0002057;1.57e-28;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-11!102;UBERON:0003061!2.22e-11!102;UBERON:0002371!3.89e-11!80;UBERON:0002193!9.82e-11!112;UBERON:0001474!2.18e-10!86;UBERON:0004765!1.33e-09!101;UBERON:0001434!1.33e-09!101;UBERON:0003081!3.01e-09!216;UBERON:0002405!1.19e-08!115;UBERON:0000926!2.39e-08!448;UBERON:0004120!2.39e-08!448;UBERON:0006603!2.39e-08!448;UBERON:0002204!7.57e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.22e-11!102;UBERON:0003061!2.22e-11!102;UBERON:0002371!3.89e-11!80;UBERON:0002193!9.82e-11!112;UBERON:0001474!2.18e-10!86;UBERON:0004765!1.33e-09!101;UBERON:0001434!1.33e-09!101;UBERON:0003081!3.01e-09!216;UBERON:0002405!1.19e-08!115;UBERON:0000926!2.39e-08!448;UBERON:0004120!2.39e-08!448;UBERON:0006603!2.39e-08!448;UBERON:0002204!7.57e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.69e-27,76;UBERON:0001474,2.24e-25,82;UBERON:0004765,2.86e-24,90;UBERON:0001434,6.80e-23,100;UBERON:0002390,2.27e-22,98;UBERON:0003061,2.27e-22,98;UBERON:0002405,1.73e-20,93;UBERON:0002193,6.31e-20,108;UBERON:0003081,1.42e-13,203;UBERON:0002384,2.34e-13,371;UBERON:0002204,7.47e-11,167;UBERON:0000926,4.20e-08,315;UBERON:0004120,4.20e-08,315;UBERON:0006603,4.20e-08,315 | |||
|phase1_expression=0.54503513781167,0.214100523890983,1.55049844505568,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,3.79031924056099,1.04474251279935,0.245733936501509,0,0,0.263766978228454,2.22779435328084,1.65698687863958,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,2.78669021968937,0,0,0,0,0,0.293600439334847,2.76997704265939,4.21143339687298,6.07630438004385,0,0,0,1.89017710413434,1.88937971844405,0.485168122375632,1.62700325833979,1.6446715520873,2.16794459626573,2.01384674625505,1.7931249457037,0.945928919554341,5.5159308917859,4.51839278508678,5.41705946377367,2.82363509313907,3.27487380069415,2.9214052977861,8.26426509401437,5.77672248736969,10.8687311385837,0.659702600373432,1.19678194572979,1.70489900213078,2.32167390902867,1.13477044938228,3.11411124497787,0.75374599577023,1.5644487552606,1.08594422352558,1.81619850790011,2.57794345191295,2.21523671208619,2.74631872205524,5.31510749912609,2.09658645508376,3.36985893439485,3.15371474967163,1.28580469357664,1.42506371870624,6.56425034756997,2.19196984517561,0,0,0,0,0,0,0,0,2.27685187643779,3.52342313622563,3.05818582500183,0,1.68152568894461,0,1.7703879310245,4.32311839024081,3.08402248499264,0,0.651844533267181,0.946895611469467,0,0,1.17842362989935,0.886135578334485,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0,2.09071047609954,0,0.766440987203842,1.03088233644789,1.77113784413652,0,0,0,0,0.127986611154418,0,0,0,3.02410114837099,4.54648332831962,2.31719046212478,0,0,0,0,0.50133791063589,1.01392563272577,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0,0,0,0,0.949265659568129,0.183201743930407,3.9534125230819,3.87780264148325,0.436094052142534,0,0.12663051166458,0.794455084879313,0.573673241497627,1.41867352879343,0.560677600142307,0,0.74000264525148,0,0,0,0,0,0,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0.89694817844431,0.640672166455702,0.211931901159562,0.600182192168805,0,0.257640540045629,0,0,0.0974370051611986,1.51460264546469,0.184099797284599,0.323292113637624,0.710019185033229,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.871517776369625,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0,1.40241773803446,0,0,0,0.982827216677626,2.36315962672562,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,1.03993478527958,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0,22.1841083628626,20.4650333852085,21.2087288156318,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,1.59562869950922,0,0,1.41849132023278,0.266422179016099,0.714889968290738,1.08524321078289,0.823240336780769,0,0.710783897485092,0,0.602878754119172,0,1.59956785891291,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.179060963239896,0,3.34952292343276,4.74380664690938,4.36366323351144,0,0,0,0,0,8.98808428736619,29.9161459204025,14.5045429702612,0.858840442033979,0,0.542530047399471,0.207970861530807,0.356857977594324,0.630809660135739,0,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0.195801157462741,0,1.03384013061444,5.60856922128404,3.20182673410333,0,0,0,0.992431231275107,0.153461973288062,0.561320188866147,0.384417447767103,0.511707249066704,1.60853921143608,1.48418066444991,0,0.355123450626254,0.164254312027618,0.519254429183621,0.813472649219715,0,0,0.552485933615378,0,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.211103257785751,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0,0.522870902049801,0,0.656029291399411,0.650756789328606,1.54561517471583,0,0.330037999682352,0,0,3.21367859688319,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.826424576804891,0,0.127612712494584,0.30347334256665,2.78907329578371,0.94443704049192,0,0.924100740528266,0.532306030317022,2.60979897622522,0.18532421910392,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.404364963146632,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0,0.35667105148125,0,5.2776908824416,3.29294892959902,0,0.349934720244983,0.288666338176536,0,1.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| ||
|short_description=p4@AJ227912 | |short_description=p4@AJ227912 | ||
}} | }} |
Latest revision as of 13:06, 30 July 2015
Short description: | p4@AJ227912 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AJ227912_5end |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | -226bp_to_AJ227912_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.69e-27 | 76 |
bone element | 2.24e-25 | 82 |
skeletal element | 2.86e-24 | 90 |
skeletal system | 6.80e-23 | 100 |
hematopoietic system | 2.27e-22 | 98 |
blood island | 2.27e-22 | 98 |
immune system | 1.73e-20 | 93 |
hemolymphoid system | 6.31e-20 | 108 |
lateral plate mesoderm | 1.42e-13 | 203 |
connective tissue | 2.34e-13 | 371 |
musculoskeletal system | 7.47e-11 | 167 |
mesoderm | 4.20e-08 | 315 |
mesoderm-derived structure | 4.20e-08 | 315 |
presumptive mesoderm | 4.20e-08 | 315 |