FFCP PHASE1:Hg19::chr7:134625866..134625911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:134625866..134625911,- | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_at_chr7:134625866..134625911,- | |description=CAGE_peak_at_chr7:134625866..134625911,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.74e-23!180;CL:0000057!5.04e-15!75;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000187!3.23e-08!54;CL:0000393!3.35e-08!60;CL:0000211!3.35e-08!60;CL:0002620!4.95e-08!23;CL:0000183!2.83e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.74e-23!180;CL:0000057!5.04e-15!75;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000187!3.23e-08!54;CL:0000393!3.35e-08!60;CL:0000211!3.35e-08!60;CL:0002620!4.95e-08!23;CL:0000183!2.83e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.18e-08;23!CL:0002334;9.40e-08;12!CL:0000057;2.40e-07;73 | |ontology_enrichment_celltype_v019=CL:0002620;7.18e-08;23!CL:0002334;9.40e-08;12!CL:0000057;2.40e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-19,76;CL:0000048,6.75e-11,427;CL:0000723,2.37e-10,433;CL:0000187,1.06e-09,55;CL:0000034,1.18e-09,441;CL:0000393,6.60e-09,61;CL:0000211,6.60e-09,61;CL:0000680,8.10e-09,58;CL:0000056,8.10e-09,58;CL:0000355,8.10e-09,58;CL:0002620,7.03e-08,23;CL:0002334,8.51e-08,12;CL:0000192,1.99e-07,43;CL:0000514,1.99e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.03e-10!83;UBERON:0002329!3.03e-10!83;UBERON:0003077!3.03e-10!83;UBERON:0003059!3.03e-10!83;UBERON:0007282!3.03e-10!83;UBERON:0009618!3.03e-10!83;UBERON:0007285!3.03e-10!83;UBERON:0005256!1.67e-09!143;UBERON:0000486!4.77e-09!82;UBERON:0004290!4.98e-09!70;UBERON:0002385!8.50e-09!63;UBERON:0001015!8.50e-09!63;UBERON:0000383!8.50e-09!63;UBERON:0002100!9.19e-09!216;UBERON:0000475!1.02e-08!365;UBERON:0003102!1.81e-08!95;UBERON:0000490!2.34e-08!138;UBERON:0001134!3.94e-08!61;UBERON:0002036!3.94e-08!61;UBERON:0003082!3.94e-08!61;UBERON:0000468!5.95e-08!659 | |ontology_enrichment_uberon=UBERON:0000914!3.03e-10!83;UBERON:0002329!3.03e-10!83;UBERON:0003077!3.03e-10!83;UBERON:0003059!3.03e-10!83;UBERON:0007282!3.03e-10!83;UBERON:0009618!3.03e-10!83;UBERON:0007285!3.03e-10!83;UBERON:0005256!1.67e-09!143;UBERON:0000486!4.77e-09!82;UBERON:0004290!4.98e-09!70;UBERON:0002385!8.50e-09!63;UBERON:0001015!8.50e-09!63;UBERON:0000383!8.50e-09!63;UBERON:0002100!9.19e-09!216;UBERON:0000475!1.02e-08!365;UBERON:0003102!1.81e-08!95;UBERON:0000490!2.34e-08!138;UBERON:0001134!3.94e-08!61;UBERON:0002036!3.94e-08!61;UBERON:0003082!3.94e-08!61;UBERON:0000468!5.95e-08!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.42e-07;9!UBERON:0000042;1.42e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.42e-07;9!UBERON:0000042;1.42e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.63e-10,73;UBERON:0002329,1.68e-09,71;UBERON:0003059,1.68e-09,71;UBERON:0007282,1.68e-09,71;UBERON:0004290,1.68e-09,71;UBERON:0009618,1.68e-09,71;UBERON:0003077,2.99e-09,72;UBERON:0007285,2.99e-09,72;UBERON:0002385,5.84e-09,64;UBERON:0001015,5.84e-09,64;UBERON:0000383,5.84e-09,64;UBERON:0001134,1.43e-08,62;UBERON:0002036,1.43e-08,62;UBERON:0003082,1.43e-08,62;UBERON:0000486,2.18e-08,83;UBERON:0007503,6.77e-08,78;UBERON:0005256,1.21e-07,122;UBERON:0002199,8.00e-07,46;UBERON:0002416,8.00e-07,46 | |||
|phase1_expression=1.99846217197612,3.42560838225573,2.96004248601539,10.007329835313,7.15137751083661,13.0850778615055,0,1.26343974685366,0,0,0,0,0,0.495065411840187,0.662794751455832,5.3786011716142,4.21886169616784,2.92124036154949,3.90346239032406,0.246242116153576,0,0,1.43117993565528,0.684372125364421,1.50651167513763,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,4.69870898099936,1.00267582127178,2.462390822334,0,0,0.378139268656271,1.99556457716308,0.702678285545008,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.732186172644509,0.735326160691737,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,17.3940183093361,1.13967460498122,1.58891016975863,4.01571269048339,1.41867352879343,0.560677600142307,2.1349799145941,1.2333377420858,0,1.48181739276657,1.9615428373615,0.302714855289863,1.15235184896,0,0.312160076830321,0,1.34503812496621,1.17434498643765,0.161872944368132,0.702254033511242,1.02077085627447,0.982674538494144,0.309977343527296,2.37600571456411,6.67620709052104,0,0,0.673344455816265,0.250237039743928,0,0.877955241761676,7.04921930337745,3.00476117813194,1.13432183160021,3.22901344239952,2.56268866582281,1.69545520927649,2.40072876867522,0.721367704669072,6.69865404118636,2.41951913231067,0.168776332241266,1.55899208257918,2.77677151668526,2.11714766877288,0.484938170456436,4.61512470271599,1.5112814734146,1.01736355386293,0.57978255948989,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0,1.56449532329816,7.71889125831462,0,2.78620756819187,0,0.591534000199219,0.337169380156203,0.241011029883482,0.441175890929576,0.217879444092406,0.71181185733329,0.404493924480493,0.392442930250692,0,0,0,0.4115740113314,0,0,0.982827216677626,1.18157981336281,0,0,0.343135620597051,0.98775256867763,0,0.502644862058154,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.469634776943287,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,1.17587489739202,0.141775097242386,1.07470227243418,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0.308482478109971,0,0,0,0,0.51336800074665,1.42198887333556,0,0,9.0418959638856,6.24044621468197,0.257207374262142,0,0,1.57275793023962,0,0,0.977208552881205,1.77695974371273,0,0.904318131178758,0,2.19940580600526,0,0,0,1.19812427745791,1.14861935834114,0,0.723906533337896,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,2.55175500661265,0,0,0,0.36807447515742,0,1.62759014219841,25.3724451067585,18.3781858461077,16.2433487484953,10.0741616893733,1.20378439891088,0,1.03473071292505,2.65690239414175,0.368738337083406,1.82455590382974,0,0.686286847621712,0,0,0,0.303127571446259,0,0,1.98486246255021,5.37116906508219,4.49056151092918,4.10045277618243,0,5.62988724002626,1.48418066444991,1.07946785661859,1.24293207719189,0.98552587216571,0.519254429183621,3.7187321107187,0,0.802025881213139,0.184161977871793,0.803701137152247,1.63882051206045,1.44236856455367,0,0.308061348417659,0,0,0.211103257785751,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0.769350375349168,0,0.650756789328606,0.412164046590889,0.366277859273374,0.247528499761764,0,0,1.6068392984416,1.25671933779759,2.15668063960502,1.38153307253517,1.92971201478343,0.966782203814463,1.0151168573996,0.511359764496605,0.979352392114111,0.826424576804891,0.768760269460425,0,0.4046311234222,1.39453664789186,1.88887408098384,0,0.308033580176089,0,0,0.55597265731176,0,0.372158369359667,1.2655176988749,2.09693213316207,0,1.28381696410176,0.636406495851874,0,1.79872457583315,1.92175920815238,0.824686816419805,0.202182481573316,3.17020642346017,1.26377536871694,0,3.89941583410055,0,3.00299805097569,1.69686518344455,1.13008116620243,0,2.65375590096488,0.876901770507525,0,0.655894752046633,0.811641507850816,0.30982349809975,0.845086807596724,1.14729081763241,1.08073945114433,1.07001315444375,0,1.68886108238131,5.59801318031833,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.445234820091624,0,0,3.38721580026819,0,0.503865495708552,0.613612095012929,0,5.28767299025073,0.269605053441981,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0,0.120596438625408,0,0,0.295547618953547,0,0.21787692703798,0.557694977114413,0.692552326534174,2.16489906109302,0.69169171316418,0.359030577639089,0.760531603454056,0,1.64875668123352,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.707660516026713,1.83309043480088,0,0,0,0,1.6051552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| ||
|short_description=p@chr7:134625866..134625911,- | |short_description=p@chr7:134625866..134625911,- | ||
}} | }} |
Latest revision as of 06:20, 31 July 2015
Short description: | p@chr7:134625866..134625911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:134625866..134625911, - |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-19 | 76 |
multi fate stem cell | 6.75e-11 | 427 |
somatic stem cell | 2.37e-10 | 433 |
muscle cell | 1.06e-09 | 55 |
stem cell | 1.18e-09 | 441 |
electrically responsive cell | 6.60e-09 | 61 |
electrically active cell | 6.60e-09 | 61 |
muscle precursor cell | 8.10e-09 | 58 |
myoblast | 8.10e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.10e-09 | 58 |
skin fibroblast | 7.03e-08 | 23 |
preadipocyte | 8.51e-08 | 12 |
smooth muscle cell | 1.99e-07 | 43 |
smooth muscle myoblast | 1.99e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.63e-10 | 73 |
somite | 1.68e-09 | 71 |
presomitic mesoderm | 1.68e-09 | 71 |
presumptive segmental plate | 1.68e-09 | 71 |
dermomyotome | 1.68e-09 | 71 |
trunk paraxial mesoderm | 1.68e-09 | 71 |
paraxial mesoderm | 2.99e-09 | 72 |
presumptive paraxial mesoderm | 2.99e-09 | 72 |
muscle tissue | 5.84e-09 | 64 |
musculature | 5.84e-09 | 64 |
musculature of body | 5.84e-09 | 64 |
skeletal muscle tissue | 1.43e-08 | 62 |
striated muscle tissue | 1.43e-08 | 62 |
myotome | 1.43e-08 | 62 |
multilaminar epithelium | 2.18e-08 | 83 |
epithelial vesicle | 6.77e-08 | 78 |
trunk mesenchyme | 1.21e-07 | 122 |
integument | 8.00e-07 | 46 |
integumental system | 8.00e-07 | 46 |