FFCP PHASE1:Hg19::chr7:73866647..73866653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:73866647..73866653,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr7:73866647..73866653,- | |description=CAGE_peak_at_chr7:73866647..73866653,- | ||
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|ontology_enrichment_celltype=CL:0000860!1.50e-27!45;CL:0002057!1.76e-23!42;CL:0000557!2.79e-20!71;CL:0002009!1.60e-18!65;CL:0000766!5.65e-18!76;CL:0000839!1.03e-17!70;CL:0000738!6.23e-17!140;CL:0002194!2.18e-16!63;CL:0000576!2.18e-16!63;CL:0000040!2.18e-16!63;CL:0000559!2.18e-16!63;CL:0002031!4.31e-15!124;CL:0002087!4.57e-13!119;CL:0000763!2.42e-11!112;CL:0000049!2.42e-11!112;CL:0000037!4.21e-11!172;CL:0000566!4.21e-11!172;CL:0002032!4.29e-10!165;CL:0000837!4.29e-10!165;CL:0000988!9.46e-10!182 | |ontology_enrichment_celltype=CL:0000860!1.50e-27!45;CL:0002057!1.76e-23!42;CL:0000557!2.79e-20!71;CL:0002009!1.60e-18!65;CL:0000766!5.65e-18!76;CL:0000839!1.03e-17!70;CL:0000738!6.23e-17!140;CL:0002194!2.18e-16!63;CL:0000576!2.18e-16!63;CL:0000040!2.18e-16!63;CL:0000559!2.18e-16!63;CL:0002031!4.31e-15!124;CL:0002087!4.57e-13!119;CL:0000763!2.42e-11!112;CL:0000049!2.42e-11!112;CL:0000037!4.21e-11!172;CL:0000566!4.21e-11!172;CL:0002032!4.29e-10!165;CL:0000837!4.29e-10!165;CL:0000988!9.46e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.77e-56;33!CL:0002057;5.77e-56;33!CL:0000473;5.56e-38;39!CL:0000234;5.56e-38;39!CL:0000576;2.41e-24;48!CL:0000766;3.87e-17;69!CL:0001014;4.76e-14;2!CL:0001016;4.76e-14;2!CL:0002087;2.31e-09;104!CL:0000763;7.44e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;5.77e-56;33!CL:0002057;5.77e-56;33!CL:0000473;5.56e-38;39!CL:0000234;5.56e-38;39!CL:0000576;2.41e-24;48!CL:0000766;3.87e-17;69!CL:0001014;4.76e-14;2!CL:0001016;4.76e-14;2!CL:0002087;2.31e-09;104!CL:0000763;7.44e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-46,42;CL:0002057,1.18e-46,42;CL:0000473,2.25e-40,48;CL:0000234,2.25e-40,48;CL:0000557,2.78e-38,67;CL:0002009,3.91e-38,61;CL:0002194,1.42e-31,59;CL:0000576,1.42e-31,59;CL:0000040,1.42e-31,59;CL:0000559,1.42e-31,59;CL:0000839,2.15e-31,66;CL:0000766,1.69e-28,72;CL:0002031,4.21e-24,120;CL:0000763,2.61e-22,108;CL:0000049,2.61e-22,108;CL:0000738,9.24e-21,136;CL:0002087,1.97e-18,115;CL:0002032,7.39e-17,161;CL:0000837,7.39e-17,161;CL:0000037,5.69e-16,168;CL:0000988,6.20e-15,177;CL:0001014,2.63e-14,2;CL:0001016,2.63e-14,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.02e-35;42!UBERON:0005754;4.81e-08;1 | |ontology_enrichment_development_v019=CL:0002057;8.02e-35;42!UBERON:0005754;4.81e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.12e-17!80;UBERON:0001474!7.50e-15!86;UBERON:0002390!3.09e-14!102;UBERON:0003061!3.09e-14!102;UBERON:0002193!5.81e-12!112;UBERON:0004765!4.02e-11!101;UBERON:0001434!4.02e-11!101;UBERON:0002405!1.73e-10!115;UBERON:0001737!2.31e-08!9 | |ontology_enrichment_uberon=UBERON:0002371!9.12e-17!80;UBERON:0001474!7.50e-15!86;UBERON:0002390!3.09e-14!102;UBERON:0003061!3.09e-14!102;UBERON:0002193!5.81e-12!112;UBERON:0004765!4.02e-11!101;UBERON:0001434!4.02e-11!101;UBERON:0002405!1.73e-10!115;UBERON:0001737!2.31e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.81e-08;1!UBERON:0006868;4.81e-08;1!UBERON:0000997;1.07e-07;1!UBERON:0005056;1.07e-07;1!UBERON:0004176;1.07e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000998;4.81e-08;1!UBERON:0006868;4.81e-08;1!UBERON:0000997;1.07e-07;1!UBERON:0005056;1.07e-07;1!UBERON:0004176;1.07e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.53e-33,76;UBERON:0001474,1.30e-30,82;UBERON:0004765,1.49e-27,90;UBERON:0002405,1.53e-26,93;UBERON:0002390,5.47e-25,98;UBERON:0003061,5.47e-25,98;UBERON:0001434,2.07e-24,100;UBERON:0002193,2.61e-22,108;UBERON:0002204,5.41e-13,167;UBERON:0003081,3.43e-11,203;UBERON:0000998,4.99e-08,1;UBERON:0006868,4.99e-08,1;UBERON:0000997,9.10e-08,1;UBERON:0005056,9.10e-08,1;UBERON:0000926,3.02e-07,315;UBERON:0004120,3.02e-07,315;UBERON:0006603,3.02e-07,315 | |||
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|short_description=p@chr7:73866647..73866653,- | |short_description=p@chr7:73866647..73866653,- | ||
}} | }} |
Latest revision as of 11:34, 31 July 2015
Short description: | p@chr7:73866647..73866653, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73866647..73866653, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-46 | 42 |
defensive cell | 2.25e-40 | 48 |
phagocyte | 2.25e-40 | 48 |
granulocyte monocyte progenitor cell | 2.78e-38 | 67 |
macrophage dendritic cell progenitor | 3.91e-38 | 61 |
monopoietic cell | 1.42e-31 | 59 |
monocyte | 1.42e-31 | 59 |
monoblast | 1.42e-31 | 59 |
promonocyte | 1.42e-31 | 59 |
myeloid lineage restricted progenitor cell | 2.15e-31 | 66 |
myeloid leukocyte | 1.69e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 4.21e-24 | 120 |
myeloid cell | 2.61e-22 | 108 |
common myeloid progenitor | 2.61e-22 | 108 |
leukocyte | 9.24e-21 | 136 |
nongranular leukocyte | 1.97e-18 | 115 |
hematopoietic oligopotent progenitor cell | 7.39e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.39e-17 | 161 |
hematopoietic stem cell | 5.69e-16 | 168 |
hematopoietic cell | 6.20e-15 | 177 |
CD1a-positive Langerhans cell | 2.63e-14 | 2 |
immature CD1a-positive Langerhans cell | 2.63e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.53e-33 | 76 |
bone element | 1.30e-30 | 82 |
skeletal element | 1.49e-27 | 90 |
immune system | 1.53e-26 | 93 |
hematopoietic system | 5.47e-25 | 98 |
blood island | 5.47e-25 | 98 |
skeletal system | 2.07e-24 | 100 |
hemolymphoid system | 2.61e-22 | 108 |
musculoskeletal system | 5.41e-13 | 167 |
lateral plate mesoderm | 3.43e-11 | 203 |
seminal vesicle | 4.99e-08 | 1 |
seminal fluid secreting gland | 4.99e-08 | 1 |
mammalian vulva | 9.10e-08 | 1 |
external female genitalia | 9.10e-08 | 1 |
mesoderm | 3.02e-07 | 315 |
mesoderm-derived structure | 3.02e-07 | 315 |
presumptive mesoderm | 3.02e-07 | 315 |