FFCP PHASE1:Hg19::chr11:94317581..94317608,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:94317581..94317608,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr11:94317581..94317608,+ | |description=CAGE_peak_at_chr11:94317581..94317608,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!7.30e-94!42;CL:0000860!8.78e-87!45;CL:0000766!1.55e-78!76;CL:0000738!3.99e-68!140;CL:0002009!1.10e-67!65;CL:0000557!1.01e-63!71;CL:0002194!1.93e-63!63;CL:0000576!1.93e-63!63;CL:0000040!1.93e-63!63;CL:0000559!1.93e-63!63;CL:0000763!1.96e-62!112;CL:0000049!1.96e-62!112;CL:0000839!1.30e-58!70;CL:0000037!4.01e-56!172;CL:0000566!4.01e-56!172;CL:0000988!6.72e-54!182;CL:0002032!3.46e-51!165;CL:0000837!3.46e-51!165;CL:0002087!6.10e-48!119;CL:0002031!2.72e-45!124;CL:0000134!1.44e-22!358;CL:0002393!2.38e-22!9;CL:0002397!2.38e-22!9;CL:0002320!8.51e-22!365;CL:0000094!5.39e-21!8;CL:0000219!4.45e-19!390;CL:0000081!2.45e-18!11;CL:0000048!7.90e-16!430;CL:0000034!1.57e-15!444;CL:0000723!2.28e-15!436;CL:0000990!5.54e-12!8;CL:0000453!8.47e-12!5;CL:0000451!1.30e-09!10;CL:0000775!5.23e-09!3;CL:0000767!1.50e-08!3;CL:0000842!3.35e-08!3;CL:0000063!8.38e-08!578;CL:0002371!1.10e-07!591;CL:0000875!1.39e-07!3;CL:0002396!1.39e-07!3;CL:0000771!7.94e-07!2;CL:0000144!8.22e-07!625 | |ontology_enrichment_celltype=CL:0002057!7.30e-94!42;CL:0000860!8.78e-87!45;CL:0000766!1.55e-78!76;CL:0000738!3.99e-68!140;CL:0002009!1.10e-67!65;CL:0000557!1.01e-63!71;CL:0002194!1.93e-63!63;CL:0000576!1.93e-63!63;CL:0000040!1.93e-63!63;CL:0000559!1.93e-63!63;CL:0000763!1.96e-62!112;CL:0000049!1.96e-62!112;CL:0000839!1.30e-58!70;CL:0000037!4.01e-56!172;CL:0000566!4.01e-56!172;CL:0000988!6.72e-54!182;CL:0002032!3.46e-51!165;CL:0000837!3.46e-51!165;CL:0002087!6.10e-48!119;CL:0002031!2.72e-45!124;CL:0000134!1.44e-22!358;CL:0002393!2.38e-22!9;CL:0002397!2.38e-22!9;CL:0002320!8.51e-22!365;CL:0000094!5.39e-21!8;CL:0000219!4.45e-19!390;CL:0000081!2.45e-18!11;CL:0000048!7.90e-16!430;CL:0000034!1.57e-15!444;CL:0000723!2.28e-15!436;CL:0000990!5.54e-12!8;CL:0000453!8.47e-12!5;CL:0000451!1.30e-09!10;CL:0000775!5.23e-09!3;CL:0000767!1.50e-08!3;CL:0000842!3.35e-08!3;CL:0000063!8.38e-08!578;CL:0002371!1.10e-07!591;CL:0000875!1.39e-07!3;CL:0002396!1.39e-07!3;CL:0000771!7.94e-07!2;CL:0000144!8.22e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.90e-71;33!CL:0002057;7.90e-71;33!CL:0000576;1.99e-50;48!CL:0000473;1.50e-49;39!CL:0000234;1.50e-49;39!CL:0000766;2.87e-40;69!CL:0000094;4.93e-35;8!CL:0002393;2.59e-27;6!CL:0002397;2.59e-27;6!CL:0000081;3.95e-25;11!CL:0000763;1.63e-16;100!CL:0002087;5.62e-16;104!CL:0000775;2.46e-14;3!CL:0000767;1.41e-13;3!CL:0000738;1.46e-11;136!CL:0000771;1.19e-10;2!CL:0000988;7.66e-09;177!CL:0000219;3.76e-07;193!CL:0000226;8.54e-07;3!CL:0000842;8.54e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;7.90e-71;33!CL:0002057;7.90e-71;33!CL:0000576;1.99e-50;48!CL:0000473;1.50e-49;39!CL:0000234;1.50e-49;39!CL:0000766;2.87e-40;69!CL:0000094;4.93e-35;8!CL:0002393;2.59e-27;6!CL:0002397;2.59e-27;6!CL:0000081;3.95e-25;11!CL:0000763;1.63e-16;100!CL:0002087;5.62e-16;104!CL:0000775;2.46e-14;3!CL:0000767;1.41e-13;3!CL:0000738;1.46e-11;136!CL:0000771;1.19e-10;2!CL:0000988;7.66e-09;177!CL:0000219;3.76e-07;193!CL:0000226;8.54e-07;3!CL:0000842;8.54e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-94,42;CL:0002057,2.00e-94,42;CL:0000766,6.37e-85,72;CL:0000473,9.78e-82,48;CL:0000234,9.78e-82,48;CL:0002009,4.62e-66,61;CL:0002194,5.77e-64,59;CL:0000576,5.77e-64,59;CL:0000040,5.77e-64,59;CL:0000559,5.77e-64,59;CL:0000557,1.37e-59,67;CL:0000763,2.24e-57,108;CL:0000049,2.24e-57,108;CL:0000738,3.21e-57,136;CL:0000839,1.55e-56,66;CL:0000037,4.56e-47,168;CL:0000988,2.94e-44,177;CL:0002032,2.67e-42,161;CL:0000837,2.67e-42,161;CL:0002087,1.92e-41,115;CL:0002031,6.11e-37,120;CL:0000094,3.03e-35,8;CL:0000081,2.78e-25,11;CL:0002393,4.29e-18,9;CL:0002397,4.29e-18,9;CL:0000134,7.12e-18,354;CL:0002320,2.34e-17,361;CL:0000219,1.54e-15,386;CL:0000775,1.92e-14,3;CL:0000767,1.19e-13,3;CL:0000048,2.59e-13,427;CL:0000723,5.25e-13,433;CL:0000034,1.31e-12,441;CL:0000771,1.11e-10,2;CL:0000226,7.38e-07,3;CL:0000842,7.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.48e-63;42!CL:0000049;3.44e-13;108 | |ontology_enrichment_development_v019=CL:0002057;4.48e-63;42!CL:0000049;3.44e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.61e-58!80;UBERON:0002390!5.00e-56!102;UBERON:0003061!5.00e-56!102;UBERON:0001474!5.55e-53!86;UBERON:0002193!8.99e-50!112;UBERON:0004765!2.95e-45!101;UBERON:0001434!2.95e-45!101;UBERON:0002405!4.17e-38!115;UBERON:0002204!2.97e-22!167;UBERON:0002384!1.16e-21!375;UBERON:0003081!4.45e-20!216 | |ontology_enrichment_uberon=UBERON:0002371!6.61e-58!80;UBERON:0002390!5.00e-56!102;UBERON:0003061!5.00e-56!102;UBERON:0001474!5.55e-53!86;UBERON:0002193!8.99e-50!112;UBERON:0004765!2.95e-45!101;UBERON:0001434!2.95e-45!101;UBERON:0002405!4.17e-38!115;UBERON:0002204!2.97e-22!167;UBERON:0002384!1.16e-21!375;UBERON:0003081!4.45e-20!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.19e-55,76;UBERON:0001474,1.08e-50,82;UBERON:0002390,3.94e-47,98;UBERON:0003061,3.94e-47,98;UBERON:0004765,1.40e-45,90;UBERON:0002405,6.90e-44,93;UBERON:0002193,4.25e-42,108;UBERON:0001434,2.50e-40,100;UBERON:0002204,2.87e-21,167;UBERON:0003081,7.03e-19,203;UBERON:0002384,1.18e-16,371;UBERON:0000926,1.85e-09,315;UBERON:0004120,1.85e-09,315;UBERON:0006603,1.85e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.23150884174919,1.02324015707783,2.75354993794233,3.0706351847777,1.85779347979291,0,0,0,0,0,1.17440175733939,12.7418943962332,11.4310335057981,12.3696196308036,0,0,0,0.290796477559129,0,0.727752183563449,0.697287110717054,2.05583944010913,2.78735733805593,2.8769239232215,2.81776777182011,7.09446689665756,4.48169384957604,4.51839278508678,4.06279459783025,0.941211697713023,0.545812300115692,2.47195832889593,2.14258724659632,1.60464513538047,4.47535988059329,0.659702600373432,0.199463657621632,2.98357325372886,6.67481248845743,2.26954089876456,6.22822248995575,1.00499466102697,1.5644487552606,3.69221035998698,3.63239701580021,7.36555271975129,4.1140110367315,1.47878700418359,4.889898899196,4.82214884669265,1.01095768031846,1.20141514273205,1.6072558669708,0.855038231223746,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,19.3890132074163,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,4.49404214368309,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,5.1771408196468,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,1.23150884174919,1.02324015707783,2.75354993794233,3.0706351847777,1.85779347979291,0,0,0,0,0,1.17440175733939,12.7418943962332,11.4310335057981,12.3696196308036,0,0,0,0.290796477559129,0,0.727752183563449,0.697287110717054,2.05583944010913,2.78735733805593,2.8769239232215,2.81776777182011,7.09446689665756,4.48169384957604,4.51839278508678,4.06279459783025,0.941211697713023,0.545812300115692,2.47195832889593,2.14258724659632,1.60464513538047,4.47535988059329,0.659702600373432,0.199463657621632,2.98357325372886,6.67481248845743,2.26954089876456,6.22822248995575,1.00499466102697,1.5644487552606,3.69221035998698,3.63239701580021,7.36555271975129,4.1140110367315,1.47878700418359,4.889898899196,4.82214884669265,1.01095768031846,1.20141514273205,1.6072558669708,0.855038231223746,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,19.3890132074163,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,4.49404214368309,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,5.1771408196468,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:94317581..94317608,+ | |short_description=p@chr11:94317581..94317608,+ | ||
}} | }} |
Latest revision as of 03:38, 24 July 2015
Short description: | p@chr11:94317581..94317608, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94317581..94317608, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.19e-55 | 76 |
bone element | 1.08e-50 | 82 |
hematopoietic system | 3.94e-47 | 98 |
blood island | 3.94e-47 | 98 |
skeletal element | 1.40e-45 | 90 |
immune system | 6.90e-44 | 93 |
hemolymphoid system | 4.25e-42 | 108 |
skeletal system | 2.50e-40 | 100 |
musculoskeletal system | 2.87e-21 | 167 |
lateral plate mesoderm | 7.03e-19 | 203 |
connective tissue | 1.18e-16 | 371 |
mesoderm | 1.85e-09 | 315 |
mesoderm-derived structure | 1.85e-09 | 315 |
presumptive mesoderm | 1.85e-09 | 315 |