FFCP PHASE1:Hg19::chr1:241695443..241695452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8564 | |EntrezGene=8564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6381 | |HGNC=6381 | ||
|TSSclassifier=strong | |||
|UniProt=O15229 | |UniProt=O15229 | ||
|association_with_transcript=9bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | |association_with_transcript=9bp_to_ENST00000366558,ENST00000366559,NM_003679_5end | ||
|cluster_id=chr1:241695443..241695452,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_7_at_KMO_5end | |description=CAGE_peak_7_at_KMO_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.70e-97!42;CL:0002194!1.22e-95!63;CL:0000576!1.22e-95!63;CL:0000040!1.22e-95!63;CL:0000559!1.22e-95!63;CL:0002009!2.51e-92!65;CL:0000860!6.73e-90!45;CL:0000839!7.34e-85!70;CL:0000557!1.72e-83!71;CL:0000766!2.29e-80!76;CL:0000738!2.22e-74!140;CL:0002087!1.93e-73!119;CL:0002031!1.87e-67!124;CL:0000037!1.17e-57!172;CL:0000566!1.17e-57!172;CL:0000763!2.93e-57!112;CL:0000049!2.93e-57!112;CL:0002032!1.47e-54!165;CL:0000837!1.47e-54!165;CL:0000988!1.24e-53!182;CL:0002393!4.00e-22!9;CL:0002397!4.00e-22!9;CL:0000134!1.87e-19!358;CL:0002320!8.96e-19!365;CL:0000219!2.22e-16!390;CL:0000451!9.57e-14!10;CL:0000048!1.60e-13!430;CL:0000723!4.07e-13!436;CL:0000034!1.36e-12!444;CL:0000236!2.50e-11!14;CL:0000990!1.22e-09!8;CL:0000945!3.45e-09!24;CL:0000826!3.45e-09!24;CL:0000784!1.62e-08!3;CL:0000875!2.04e-08!3;CL:0002396!2.04e-08!3;CL:0002619!2.10e-08!3 | |ontology_enrichment_celltype=CL:0002057!3.70e-97!42;CL:0002194!1.22e-95!63;CL:0000576!1.22e-95!63;CL:0000040!1.22e-95!63;CL:0000559!1.22e-95!63;CL:0002009!2.51e-92!65;CL:0000860!6.73e-90!45;CL:0000839!7.34e-85!70;CL:0000557!1.72e-83!71;CL:0000766!2.29e-80!76;CL:0000738!2.22e-74!140;CL:0002087!1.93e-73!119;CL:0002031!1.87e-67!124;CL:0000037!1.17e-57!172;CL:0000566!1.17e-57!172;CL:0000763!2.93e-57!112;CL:0000049!2.93e-57!112;CL:0002032!1.47e-54!165;CL:0000837!1.47e-54!165;CL:0000988!1.24e-53!182;CL:0002393!4.00e-22!9;CL:0002397!4.00e-22!9;CL:0000134!1.87e-19!358;CL:0002320!8.96e-19!365;CL:0000219!2.22e-16!390;CL:0000451!9.57e-14!10;CL:0000048!1.60e-13!430;CL:0000723!4.07e-13!436;CL:0000034!1.36e-12!444;CL:0000236!2.50e-11!14;CL:0000990!1.22e-09!8;CL:0000945!3.45e-09!24;CL:0000826!3.45e-09!24;CL:0000784!1.62e-08!3;CL:0000875!2.04e-08!3;CL:0002396!2.04e-08!3;CL:0002619!2.10e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.47e-105;33!CL:0002057;2.47e-105;33!CL:0000473;1.15e-72;39!CL:0000234;1.15e-72;39!CL:0000576;5.17e-60;48!CL:0000766;1.80e-32;69!CL:0002087;1.96e-18;104!CL:0000763;3.34e-13;100!CL:0000738;3.81e-12;136!CL:0000236;1.04e-07;13 | |ontology_enrichment_celltype_v019=CL:0000860;2.47e-105;33!CL:0002057;2.47e-105;33!CL:0000473;1.15e-72;39!CL:0000234;1.15e-72;39!CL:0000576;5.17e-60;48!CL:0000766;1.80e-32;69!CL:0002087;1.96e-18;104!CL:0000763;3.34e-13;100!CL:0000738;3.81e-12;136!CL:0000236;1.04e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-104,42;CL:0002057,1.40e-104,42;CL:0000473,6.58e-91,48;CL:0000234,6.58e-91,48;CL:0002194,2.56e-77,59;CL:0000576,2.56e-77,59;CL:0000040,2.56e-77,59;CL:0000559,2.56e-77,59;CL:0002009,1.15e-74,61;CL:0000839,1.00e-68,66;CL:0000557,1.21e-67,67;CL:0000766,1.14e-62,72;CL:0002087,2.97e-50,115;CL:0002031,5.78e-48,120;CL:0000738,9.29e-42,136;CL:0000763,2.57e-40,108;CL:0000049,2.57e-40,108;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441;CL:0000236,3.54e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-76;42!CL:0000049;2.10e-11;108 | |ontology_enrichment_development_v019=CL:0002057;4.93e-76;42!CL:0000049;2.10e-11;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-72!80;UBERON:0002390!7.40e-67!102;UBERON:0003061!7.40e-67!102;UBERON:0001474!9.70e-67!86;UBERON:0002193!1.16e-59!112;UBERON:0004765!6.39e-55!101;UBERON:0001434!6.39e-55!101;UBERON:0002405!7.36e-51!115;UBERON:0002204!2.13e-29!167;UBERON:0003081!2.21e-25!216;UBERON:0002384!7.57e-18!375 | |ontology_enrichment_uberon=UBERON:0002371!1.07e-72!80;UBERON:0002390!7.40e-67!102;UBERON:0003061!7.40e-67!102;UBERON:0001474!9.70e-67!86;UBERON:0002193!1.16e-59!112;UBERON:0004765!6.39e-55!101;UBERON:0001434!6.39e-55!101;UBERON:0002405!7.36e-51!115;UBERON:0002204!2.13e-29!167;UBERON:0003081!2.21e-25!216;UBERON:0002384!7.57e-18!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.72e-59,76;UBERON:0001474,1.61e-54,82;UBERON:0004765,2.75e-49,90;UBERON:0002405,1.49e-47,93;UBERON:0002390,6.73e-45,98;UBERON:0003061,6.73e-45,98;UBERON:0001434,6.56e-44,100;UBERON:0002193,2.57e-40,108;UBERON:0002204,2.33e-24,167;UBERON:0003081,3.85e-19,203;UBERON:0002384,5.75e-12,371;UBERON:0000926,1.78e-10,315;UBERON:0004120,1.78e-10,315;UBERON:0006603,1.78e-10,315 | |||
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| ||
|short_description=p7@KMO | |short_description=p7@KMO | ||
}} | }} |
Latest revision as of 17:59, 16 September 2015
Short description: | p7@KMO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KMO_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 9bp_to_ENST00000366558, ENST00000366559, NM_003679_5end |
EntrezGene: | KMO |
HGNC: | 6381 |
UniProt: | O15229 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.40e-104 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-104 | 42 |
defensive cell | 6.58e-91 | 48 |
phagocyte | 6.58e-91 | 48 |
monopoietic cell | 2.56e-77 | 59 |
monocyte | 2.56e-77 | 59 |
monoblast | 2.56e-77 | 59 |
promonocyte | 2.56e-77 | 59 |
macrophage dendritic cell progenitor | 1.15e-74 | 61 |
myeloid lineage restricted progenitor cell | 1.00e-68 | 66 |
granulocyte monocyte progenitor cell | 1.21e-67 | 67 |
myeloid leukocyte | 1.14e-62 | 72 |
nongranular leukocyte | 2.97e-50 | 115 |
hematopoietic lineage restricted progenitor cell | 5.78e-48 | 120 |
leukocyte | 9.29e-42 | 136 |
myeloid cell | 2.57e-40 | 108 |
common myeloid progenitor | 2.57e-40 | 108 |
hematopoietic oligopotent progenitor cell | 1.65e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-34 | 161 |
hematopoietic stem cell | 7.32e-33 | 168 |
hematopoietic cell | 6.20e-31 | 177 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
B cell | 3.54e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.72e-59 | 76 |
bone element | 1.61e-54 | 82 |
skeletal element | 2.75e-49 | 90 |
immune system | 1.49e-47 | 93 |
hematopoietic system | 6.73e-45 | 98 |
blood island | 6.73e-45 | 98 |
skeletal system | 6.56e-44 | 100 |
hemolymphoid system | 2.57e-40 | 108 |
musculoskeletal system | 2.33e-24 | 167 |
lateral plate mesoderm | 3.85e-19 | 203 |
connective tissue | 5.75e-12 | 371 |
mesoderm | 1.78e-10 | 315 |
mesoderm-derived structure | 1.78e-10 | 315 |
presumptive mesoderm | 1.78e-10 | 315 |