FFCP PHASE1:Hg19::chr1:170633225..170633230,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=-82bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | |association_with_transcript=-82bp_to_NM_006902,NM_022716,uc001ghe.2,uc001ghf.2_5end | ||
|cluster_id=chr1:170633225..170633230,+ | |||
|coexpression_cluster_id=C851 | |coexpression_cluster_id=C851 | ||
|description=CAGE_peak_25_at_PRRX1_5end | |description=CAGE_peak_25_at_PRRX1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!6.53e-38!180;CL:0000057!1.80e-22!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.19e-15!54;CL:0000183!1.22e-14!59;CL:0000359!4.48e-14!32;CL:0000393!3.77e-13!60;CL:0000211!3.77e-13!60;CL:0002620!1.49e-12!23;CL:0000192!7.32e-12!42;CL:0000514!7.32e-12!42;CL:0000048!3.54e-09!430;CL:0000723!1.62e-08!436;CL:0000034!1.09e-07!444;CL:0000188!2.19e-07!9 | |ontology_enrichment_celltype=CL:0000055!6.53e-38!180;CL:0000057!1.80e-22!75;CL:0000680!1.17e-16!57;CL:0000056!1.17e-16!57;CL:0000355!1.17e-16!57;CL:0000187!2.19e-15!54;CL:0000183!1.22e-14!59;CL:0000359!4.48e-14!32;CL:0000393!3.77e-13!60;CL:0000211!3.77e-13!60;CL:0002620!1.49e-12!23;CL:0000192!7.32e-12!42;CL:0000514!7.32e-12!42;CL:0000048!3.54e-09!430;CL:0000723!1.62e-08!436;CL:0000034!1.09e-07!444;CL:0000188!2.19e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.34e-11;8!CL:0000188;6.55e-10;9!CL:0002582;5.88e-09;3!CL:0000594;1.86e-08;3!CL:0002334;1.11e-07;12!CL:0002551;2.03e-07;6!CL:0000197;3.83e-07;6!CL:0000098;3.83e-07;6!CL:0002556;3.83e-07;6!CL:0002167;3.83e-07;6 | |ontology_enrichment_celltype_v019=CL:0002570;1.34e-11;8!CL:0000188;6.55e-10;9!CL:0002582;5.88e-09;3!CL:0000594;1.86e-08;3!CL:0002334;1.11e-07;12!CL:0002551;2.03e-07;6!CL:0000197;3.83e-07;6!CL:0000098;3.83e-07;6!CL:0002556;3.83e-07;6!CL:0002167;3.83e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.08e-12,76;CL:0002570,3.33e-12,8;CL:0000188,8.52e-10,9;CL:0002582,2.68e-09,3;CL:0000594,3.09e-08,3;CL:0002551,1.29e-07,6;CL:0002334,1.35e-07,12;CL:0000197,1.89e-07,6;CL:0000098,1.89e-07,6;CL:0002167,1.89e-07,6;CL:0000187,2.79e-07,55;CL:0002556,3.48e-07,6;CL:0002561,5.63e-07,2;CL:0000680,9.82e-07,58;CL:0000056,9.82e-07,58;CL:0000355,9.82e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.16e-26!83;UBERON:0002329!1.16e-26!83;UBERON:0003077!1.16e-26!83;UBERON:0003059!1.16e-26!83;UBERON:0007282!1.16e-26!83;UBERON:0009618!1.16e-26!83;UBERON:0007285!1.16e-26!83;UBERON:0004290!1.38e-22!70;UBERON:0000486!2.70e-19!82;UBERON:0001134!3.60e-19!61;UBERON:0002036!3.60e-19!61;UBERON:0003082!3.60e-19!61;UBERON:0002385!8.81e-19!63;UBERON:0001015!8.81e-19!63;UBERON:0000383!8.81e-19!63;UBERON:0005256!7.20e-12!143;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0003102!1.81e-10!95;UBERON:0004573!2.69e-10!33;UBERON:0004571!2.69e-10!33;UBERON:0004872!2.88e-10!84;UBERON:0000475!9.32e-09!365;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0007100!3.61e-08!27;UBERON:0002100!6.06e-08!216;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0000479!2.99e-07!787;UBERON:0000055!3.72e-07!69;UBERON:0002097!4.45e-07!40;UBERON:0001013!5.44e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!1.16e-26!83;UBERON:0002329!1.16e-26!83;UBERON:0003077!1.16e-26!83;UBERON:0003059!1.16e-26!83;UBERON:0007282!1.16e-26!83;UBERON:0009618!1.16e-26!83;UBERON:0007285!1.16e-26!83;UBERON:0004290!1.38e-22!70;UBERON:0000486!2.70e-19!82;UBERON:0001134!3.60e-19!61;UBERON:0002036!3.60e-19!61;UBERON:0003082!3.60e-19!61;UBERON:0002385!8.81e-19!63;UBERON:0001015!8.81e-19!63;UBERON:0000383!8.81e-19!63;UBERON:0005256!7.20e-12!143;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0003102!1.81e-10!95;UBERON:0004573!2.69e-10!33;UBERON:0004571!2.69e-10!33;UBERON:0004872!2.88e-10!84;UBERON:0000475!9.32e-09!365;UBERON:0002199!1.09e-08!45;UBERON:0002416!1.09e-08!45;UBERON:0001981!2.59e-08!60;UBERON:0007500!2.59e-08!60;UBERON:0004537!2.59e-08!60;UBERON:0006965!2.59e-08!60;UBERON:0007100!3.61e-08!27;UBERON:0002100!6.06e-08!216;UBERON:0000948!1.13e-07!24;UBERON:0005498!1.13e-07!24;UBERON:0004140!1.13e-07!24;UBERON:0009881!1.13e-07!24;UBERON:0004141!1.13e-07!24;UBERON:0003084!1.13e-07!24;UBERON:0007005!1.13e-07!24;UBERON:0004139!1.13e-07!24;UBERON:0004291!1.13e-07!24;UBERON:0000479!2.99e-07!787;UBERON:0000055!3.72e-07!69;UBERON:0002097!4.45e-07!40;UBERON:0001013!5.44e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.38e-11;14!UBERON:0002385;8.85e-10;31!UBERON:0001015;8.85e-10;31!UBERON:0000383;8.85e-10;31!UBERON:0001134;3.78e-09;16!UBERON:0002036;3.78e-09;16!UBERON:0001758;3.83e-07;6!UBERON:0003672;3.83e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001013;6.38e-11;14!UBERON:0002385;8.85e-10;31!UBERON:0001015;8.85e-10;31!UBERON:0000383;8.85e-10;31!UBERON:0001134;3.78e-09;16!UBERON:0002036;3.78e-09;16!UBERON:0001758;3.83e-07;6!UBERON:0003672;3.83e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.33e-11,14;UBERON:0002329,4.44e-11,71;UBERON:0003059,4.44e-11,71;UBERON:0007282,4.44e-11,71;UBERON:0004290,4.44e-11,71;UBERON:0009618,4.44e-11,71;UBERON:0003077,7.49e-11,72;UBERON:0007285,7.49e-11,72;UBERON:0007524,1.24e-10,73;UBERON:0007503,1.29e-09,78;UBERON:0000486,9.88e-09,83;UBERON:0001134,3.99e-08,62;UBERON:0002036,3.99e-08,62;UBERON:0003082,3.99e-08,62;UBERON:0002385,9.48e-08,64;UBERON:0001015,9.48e-08,64;UBERON:0000383,9.48e-08,64;UBERON:0001758,3.48e-07,6;UBERON:0003672,3.48e-07,6;UBERON:0005933,5.63e-07,2;UBERON:0005942,5.63e-07,2;UBERON:0005932,5.63e-07,2 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,0,0,0.872338524100369,0,1.26343974685366,0.261185628199839,0,0,0,0,1.23766352960047,0.662794751455832,1.34465029290355,2.41077811209591,0.730310090387373,1.46379839637152,0.246242116153576,0,0.313454721478088,0.286235987131057,0.410623275218653,0,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.50401373190767,1.15877215168659,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.264818361626438,1.14734648299525,1.41867352879343,1.68203280042692,0,0.74000264525148,0.311211035399766,0.269421344139376,0.490385709340376,0,0,0.468642863667593,2.18512053781224,1.71141546463335,1.64393548606981,0.939475989150119,0.323745888736263,1.12360645361799,2.04154171254893,0.859840221182376,1.85986406116378,0,2.71993622206413,0.910161361938026,0.718618141816238,0.336672227908132,1.25118519871964,1.38532057742091,0.877955241761676,1.5324389789951,1.50238058906597,0.340296549480063,0.358779271377724,0.213557388818567,0.635795703478686,0.300091096084402,0.412210116953756,0.772921620136887,0.558350568994769,0.843881661206331,0.876933046450788,0.252433774244115,0.460249493211497,2.26304479546337,0.355009592516614,0.604512589365842,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.448524337381443,0.43596006883328,1.24675085895615,0.517086863031111,0,1.690605505112,0.531876233169741,1.04007436911366,0.771622122786426,0,1.0656887160644,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.579125226670317,0.821905290201534,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.858840442033979,1.50051156317903,0,1.66376689224646,1.42743191037729,1.41932173530541,1.52283839490527,0,0,2.0694614258501,0.664225598535437,1.65932251687533,1.73767228936166,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.306923946576125,1.12264037773229,0.128139149255701,0,0.321707842287215,0,2.92998418225046,1.06537035187876,3.03870477251094,1.55776328755086,1.62694529843943,0,0,0,0.114814448164607,1.0925470080403,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.616194468458578,1.5350367472613,0.137836572484531,1.71872391789238,1.16013355131383,1.02271952899321,1.24644849905432,0,0,0,0,0.929691098594572,0.31481234683064,2.0911118104818,0,0.532306030317022,0,0.9266210955196,0.143124886741991,0.744316738719335,0.632758849437452,0,0.511795582622668,0,0.95460974377781,0.78494864019923,0,0,0,0.404364963146632,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.272999822815972,0.282810863907425,3.39024349860728,1.65409603063837,0,0.876901770507525,0,0,0.202910376962704,1.239293992399,0.281695602532241,0.573645408816206,0.0982490410131212,0.35667105148125,0.709522128141196,0.422215270595328,0.987884678879706,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0,0.369254416383208,0.311039587661807,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,1.69290568708354,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.884612114798832,0,0,0,0,0,0,0,0.554698692052555,0,0,0,0.698906672968121,0,0,0,0,0.581934098930517,0,0.451961481561065,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0.288950589901519,0,0,0,0,0,1.11712960508902,0.916641696046735,0,0,0.429226048136571,1.33902874465124,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0.714695326373367,0,1.017074150619,0.542999601753713,0.864221491201268,0,0,0,0.681552087141687,0,0.146552233678082,0,0,0,0,0,0.747511887973863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,1.79105763464249,1.40227985908335,3.88364103051829,0.568209015825267,0,0.889811221596536,0.915360273587694,1.36107831386915,1.39893480524502,1.62640664988597,0.63718706865481,0.449803112163605,0.465788870628778,0.829412415681711,0,0,0,0,0.406870733204662,0.545545977607678,0.322231671127465,0.464033759878494,0.398095888698616,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0.157265941855896,0,0,1.06287460050841,0,0,1.27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| ||
|short_description=p25@PRRX1 | |short_description=p25@PRRX1 | ||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p25@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -82bp_to_NM_006902, NM_022716, uc001ghe.2, uc001ghf.2_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.08e-12 | 76 |
mesenchymal stem cell of adipose | 3.33e-12 | 8 |
cell of skeletal muscle | 8.52e-10 | 9 |
visceral preadipocyte | 2.68e-09 | 3 |
skeletal muscle satellite cell | 3.09e-08 | 3 |
fibroblast of dermis | 1.29e-07 | 6 |
preadipocyte | 1.35e-07 | 12 |
receptor cell | 1.89e-07 | 6 |
sensory epithelial cell | 1.89e-07 | 6 |
olfactory epithelial cell | 1.89e-07 | 6 |
muscle cell | 2.79e-07 | 55 |
fibroblast of periodontium | 3.48e-07 | 6 |
outer root sheath cell | 5.63e-07 | 2 |
muscle precursor cell | 9.82e-07 | 58 |
myoblast | 9.82e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.82e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.33e-11 | 14 |
somite | 4.44e-11 | 71 |
presomitic mesoderm | 4.44e-11 | 71 |
presumptive segmental plate | 4.44e-11 | 71 |
dermomyotome | 4.44e-11 | 71 |
trunk paraxial mesoderm | 4.44e-11 | 71 |
paraxial mesoderm | 7.49e-11 | 72 |
presumptive paraxial mesoderm | 7.49e-11 | 72 |
dense mesenchyme tissue | 1.24e-10 | 73 |
epithelial vesicle | 1.29e-09 | 78 |
multilaminar epithelium | 9.88e-09 | 83 |
skeletal muscle tissue | 3.99e-08 | 62 |
striated muscle tissue | 3.99e-08 | 62 |
myotome | 3.99e-08 | 62 |
muscle tissue | 9.48e-08 | 64 |
musculature | 9.48e-08 | 64 |
musculature of body | 9.48e-08 | 64 |
periodontium | 3.48e-07 | 6 |
dentition | 3.48e-07 | 6 |
hair root sheath | 5.63e-07 | 2 |
hair outer root sheath | 5.63e-07 | 2 |
bulb of hair follicle | 5.63e-07 | 2 |