FFCP PHASE1:Hg19::chr17:39846114..39846150,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10209 | |EntrezGene=10209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3249 | |HGNC=3249 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=373bp_to_ENST00000479972_5end | |association_with_transcript=373bp_to_ENST00000479972_5end | ||
|cluster_id=chr17:39846114..39846150,+ | |||
|description=CAGE_peak_4_at_EIF1_5end | |description=CAGE_peak_4_at_EIF1_5end | ||
|id=chr17:39846114..39846150,+ | |id=chr17:39846114..39846150,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.54e-23!42;CL:0000860!1.96e-20!45;CL:0002087!1.10e-17!119;CL:0000738!5.30e-17!140;CL:0002009!9.93e-16!65;CL:0002031!4.26e-15!124;CL:0002194!6.10e-15!63;CL:0000576!6.10e-15!63;CL:0000040!6.10e-15!63;CL:0000559!6.10e-15!63;CL:0000766!1.72e-14!76;CL:0000557!1.43e-13!71;CL:0002032!6.58e-12!165;CL:0000837!6.58e-12!165;CL:0000037!8.02e-12!172;CL:0000566!8.02e-12!172;CL:0000839!1.72e-11!70;CL:0000988!2.23e-10!182;CL:0000763!1.95e-08!112;CL:0000049!1.95e-08!112;CL:0000723!2.68e-07!436;CL:0000034!3.78e-07!444;CL:0002320!4.44e-07!365;CL:0000048!5.60e-07!430;CL:0000134!5.88e-07!358 | |ontology_enrichment_celltype=CL:0002057!5.54e-23!42;CL:0000860!1.96e-20!45;CL:0002087!1.10e-17!119;CL:0000738!5.30e-17!140;CL:0002009!9.93e-16!65;CL:0002031!4.26e-15!124;CL:0002194!6.10e-15!63;CL:0000576!6.10e-15!63;CL:0000040!6.10e-15!63;CL:0000559!6.10e-15!63;CL:0000766!1.72e-14!76;CL:0000557!1.43e-13!71;CL:0002032!6.58e-12!165;CL:0000837!6.58e-12!165;CL:0000037!8.02e-12!172;CL:0000566!8.02e-12!172;CL:0000839!1.72e-11!70;CL:0000988!2.23e-10!182;CL:0000763!1.95e-08!112;CL:0000049!1.95e-08!112;CL:0000723!2.68e-07!436;CL:0000034!3.78e-07!444;CL:0002320!4.44e-07!365;CL:0000048!5.60e-07!430;CL:0000134!5.88e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-23;33!CL:0002057;1.00e-23;33!CL:0000473;2.08e-18;39!CL:0000234;2.08e-18;39!CL:0000576;9.26e-16;48!CL:0000766;2.42e-11;69!CL:0002087;4.45e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.00e-23;33!CL:0002057;1.00e-23;33!CL:0000473;2.08e-18;39!CL:0000234;2.08e-18;39!CL:0000576;9.26e-16;48!CL:0000766;2.42e-11;69!CL:0002087;4.45e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.80e-29,42;CL:0002057,2.80e-29,42;CL:0000473,3.52e-28,48;CL:0000234,3.52e-28,48;CL:0002009,9.74e-25,61;CL:0002087,6.89e-24,115;CL:0002194,1.45e-23,59;CL:0000576,1.45e-23,59;CL:0000040,1.45e-23,59;CL:0000559,1.45e-23,59;CL:0000766,4.99e-23,72;CL:0000738,5.04e-23,136;CL:0002031,1.00e-21,120;CL:0000557,1.26e-21,67;CL:0000839,4.79e-19,66;CL:0002032,3.99e-16,161;CL:0000837,3.99e-16,161;CL:0000037,1.38e-15,168;CL:0000988,1.78e-14,177;CL:0000763,8.97e-13,108;CL:0000049,8.97e-13,108;CL:0002320,1.20e-07,361;CL:0000134,1.32e-07,354;CL:0000723,1.68e-07,433;CL:0000034,2.98e-07,441;CL:0000048,3.23e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-21;42 | |ontology_enrichment_development_v019=CL:0002057;3.23e-21;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.19e-11!80;UBERON:0001474!8.77e-10!86;UBERON:0002390!1.40e-07!102;UBERON:0003061!1.40e-07!102;UBERON:0004765!2.29e-07!101;UBERON:0001434!2.29e-07!101;UBERON:0002204!5.28e-07!167;UBERON:0002193!8.70e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!9.19e-11!80;UBERON:0001474!8.77e-10!86;UBERON:0002390!1.40e-07!102;UBERON:0003061!1.40e-07!102;UBERON:0004765!2.29e-07!101;UBERON:0001434!2.29e-07!101;UBERON:0002204!5.28e-07!167;UBERON:0002193!8.70e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-18,76;UBERON:0001474,1.57e-16,82;UBERON:0004765,1.24e-14,90;UBERON:0002390,1.83e-14,98;UBERON:0003061,1.83e-14,98;UBERON:0002405,6.06e-13,93;UBERON:0001434,7.40e-13,100;UBERON:0002193,7.56e-12,108;UBERON:0003081,4.31e-11,203;UBERON:0002204,3.13e-10,167;UBERON:0002384,3.56e-07,371;UBERON:0000926,4.37e-07,315;UBERON:0004120,4.37e-07,315;UBERON:0006603,4.37e-07,315 | |||
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| ||
|short_description=p4@EIF1 | |short_description=p4@EIF1 | ||
}} | }} |
Latest revision as of 06:59, 20 September 2015
Short description: | p4@EIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 373bp_to_ENST00000479972_5end |
EntrezGene: | EIF1 |
HGNC: | 3249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.80e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-29 | 42 |
defensive cell | 3.52e-28 | 48 |
phagocyte | 3.52e-28 | 48 |
macrophage dendritic cell progenitor | 9.74e-25 | 61 |
nongranular leukocyte | 6.89e-24 | 115 |
monopoietic cell | 1.45e-23 | 59 |
monocyte | 1.45e-23 | 59 |
monoblast | 1.45e-23 | 59 |
promonocyte | 1.45e-23 | 59 |
myeloid leukocyte | 4.99e-23 | 72 |
leukocyte | 5.04e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 1.00e-21 | 120 |
granulocyte monocyte progenitor cell | 1.26e-21 | 67 |
myeloid lineage restricted progenitor cell | 4.79e-19 | 66 |
hematopoietic oligopotent progenitor cell | 3.99e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.99e-16 | 161 |
hematopoietic stem cell | 1.38e-15 | 168 |
hematopoietic cell | 1.78e-14 | 177 |
myeloid cell | 8.97e-13 | 108 |
common myeloid progenitor | 8.97e-13 | 108 |
connective tissue cell | 1.20e-07 | 361 |
mesenchymal cell | 1.32e-07 | 354 |
somatic stem cell | 1.68e-07 | 433 |
stem cell | 2.98e-07 | 441 |
multi fate stem cell | 3.23e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.15e-18 | 76 |
bone element | 1.57e-16 | 82 |
skeletal element | 1.24e-14 | 90 |
hematopoietic system | 1.83e-14 | 98 |
blood island | 1.83e-14 | 98 |
immune system | 6.06e-13 | 93 |
skeletal system | 7.40e-13 | 100 |
hemolymphoid system | 7.56e-12 | 108 |
lateral plate mesoderm | 4.31e-11 | 203 |
musculoskeletal system | 3.13e-10 | 167 |
connective tissue | 3.56e-07 | 371 |
mesoderm | 4.37e-07 | 315 |
mesoderm-derived structure | 4.37e-07 | 315 |
presumptive mesoderm | 4.37e-07 | 315 |