FFCP PHASE1:Hg19::chr20:6035852..6035860,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:6035852..6035860,+
|short_description=p@chr20:6035852..6035860,+
|description=CAGE_peak_at_chr20:6035852..6035860,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:6035852..6035860,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr20:6035852..6035860,+ | |||
|id=chr20:6035852..6035860,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.28e-12!5;CL:0000457!4.28e-12!5;CL:0002191!4.28e-12!5;CL:0000097!4.28e-12!5;CL:0000831!4.28e-12!5;CL:0002028!4.28e-12!5;CL:0000163!5.12e-12!9;CL:0000077!1.54e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.12e-56;5!CL:0000163;1.50e-44;9!CL:0000151;3.55e-10;36!CL:0000077;1.56e-09;19!CL:0002097;5.90e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.26e-56,5;CL:0002028,3.26e-56,5;CL:0000163,1.16e-44,9;CL:0000151,6.15e-11,36;CL:0000077,1.46e-09,19;CL:0002097,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.26e-12;1 | |||
|ontology_enrichment_disease=DOID:2394!2.28e-11!14;DOID:162!1.13e-10!235;DOID:120!1.57e-10!27;DOID:14566!3.58e-10!239;DOID:193!1.43e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.02e-13;14!DOID:120;3.23e-10;27!DOID:193;1.66e-09;29!DOID:4468;9.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.61e-13,14;DOID:120,3.64e-10,27;DOID:193,1.86e-09,29 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.26e-12;1!UBERON:0001785;3.26e-12;1!UBERON:0002464;3.26e-12;1!UBERON:0004904;3.26e-12;1!UBERON:0001021;3.26e-12;1!UBERON:0003714;9.81e-07;2!UBERON:0005162;9.81e-07;2!UBERON:0000122;9.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.75e-12,1;UBERON:0001785,2.75e-12,1;UBERON:0002464,2.75e-12,1;UBERON:0004904,2.75e-12,1;UBERON:0001021,2.75e-12,1;UBERON:0003902,2.75e-12,1;UBERON:0005425,2.75e-12,1;UBERON:0003714,9.02e-07,2;UBERON:0005162,9.02e-07,2;UBERON:0000122,9.02e-07,2 | |||
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| ||
|short_description=p@chr20:6035852..6035860,+ | |||
}} | }} |
Latest revision as of 16:05, 28 July 2015
Short description: | p@chr20:6035852..6035860, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:6035852..6035860, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.26e-56 | 5 |
basophil mast progenitor cell | 3.26e-56 | 5 |
endocrine cell | 1.16e-44 | 9 |
secretory cell | 6.15e-11 | 36 |
mesothelial cell | 1.46e-09 | 19 |
cortical cell of adrenal gland | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.75e-12 | 1 |
cranial nerve | 2.75e-12 | 1 |
nerve trunk | 2.75e-12 | 1 |
nerve connecting eye with brain | 2.75e-12 | 1 |
nerve | 2.75e-12 | 1 |
retinal neural layer | 2.75e-12 | 1 |
presumptive neural retina | 2.75e-12 | 1 |
neural tissue | 9.02e-07 | 2 |
multi cell component structure | 9.02e-07 | 2 |
neuron projection bundle | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.61e-13 | 14 |
female reproductive organ cancer | 3.64e-10 | 27 |
reproductive organ cancer | 1.86e-09 | 29 |