FFCP PHASE1:Hg19::chr19:48244862..48244878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B7Z732 | |UniProt=B7Z732 | ||
|association_with_transcript=-269bp_to_AK301380_5end | |association_with_transcript=-269bp_to_AK301380_5end | ||
|cluster_id=chr19:48244862..48244878,+ | |||
|coexpression_cluster_id=C764 | |coexpression_cluster_id=C764 | ||
|description=CAGE_peak_3_at_AK301380_5end | |description=CAGE_peak_3_at_AK301380_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.04e-29!180;CL:0000057!5.29e-20!75;CL:0000222!1.44e-19!119;CL:0000220!1.69e-17!246;CL:0002321!4.91e-17!248;CL:0000183!1.18e-13!59;CL:0000680!7.62e-13!57;CL:0000056!7.62e-13!57;CL:0000355!7.62e-13!57;CL:0000187!4.48e-12!54;CL:0002371!3.58e-11!591;CL:0000144!1.75e-10!625;CL:0000192!1.90e-10!42;CL:0000514!1.90e-10!42;CL:0000393!2.60e-10!60;CL:0000211!2.60e-10!60;CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000213!4.79e-08!57;CL:0000215!4.79e-08!57;CL:0000012!5.43e-08!682;CL:0002620!6.46e-08!23;CL:0002334!3.00e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.04e-29!180;CL:0000057!5.29e-20!75;CL:0000222!1.44e-19!119;CL:0000220!1.69e-17!246;CL:0002321!4.91e-17!248;CL:0000183!1.18e-13!59;CL:0000680!7.62e-13!57;CL:0000056!7.62e-13!57;CL:0000355!7.62e-13!57;CL:0000187!4.48e-12!54;CL:0002371!3.58e-11!591;CL:0000144!1.75e-10!625;CL:0000192!1.90e-10!42;CL:0000514!1.90e-10!42;CL:0000393!2.60e-10!60;CL:0000211!2.60e-10!60;CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000213!4.79e-08!57;CL:0000215!4.79e-08!57;CL:0000012!5.43e-08!682;CL:0002620!6.46e-08!23;CL:0002334!3.00e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000057;9.33e-09;73!CL:0000192;1.68e-08;43!CL:0002620;3.29e-08;23!CL:0000134;4.91e-08;55!CL:0000187;1.26e-07;55!CL:0002334;1.41e-07;12!CL:0002320;1.43e-07;188!CL:0000048;4.03e-07;58!CL:0000723;5.89e-07;61!CL:0000359;9.21e-07;32 | |ontology_enrichment_celltype_v019=CL:0000057;9.33e-09;73!CL:0000192;1.68e-08;43!CL:0002620;3.29e-08;23!CL:0000134;4.91e-08;55!CL:0000187;1.26e-07;55!CL:0002334;1.41e-07;12!CL:0002320;1.43e-07;188!CL:0000048;4.03e-07;58!CL:0000723;5.89e-07;61!CL:0000359;9.21e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.36e-21,76;CL:0000222,1.50e-21,121;CL:0002321,2.92e-17,250;CL:0000680,4.35e-14,58;CL:0000056,4.35e-14,58;CL:0000355,4.35e-14,58;CL:0000187,2.83e-13,55;CL:0000192,1.42e-11,43;CL:0000514,1.42e-11,43;CL:0000393,1.05e-10,61;CL:0000211,1.05e-10,61;CL:0000213,1.20e-08,58;CL:0000215,1.20e-08,58;CL:0002620,3.07e-08,23;CL:0002334,1.54e-07,12;CL:0002078,3.71e-07,45;CL:0000359,4.65e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.68e-08;43!CL:0000355;9.39e-08;58 | |ontology_enrichment_development_v019=CL:0000514;1.68e-08;43!CL:0000355;9.39e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;7.62e-08;33!UBERON:0004571;7.62e-08;33!UBERON:0002384;8.06e-08;198!UBERON:0001637;1.07e-07;42!UBERON:0003509;1.07e-07;42!UBERON:0004572;1.07e-07;42!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46!UBERON:0007500;1.47e-07;56!UBERON:0001981;1.47e-07;56!UBERON:0004537;1.47e-07;56!UBERON:0002097;2.10e-07;41!UBERON:0003102;2.98e-07;50!UBERON:0000947;5.00e-07;21!UBERON:0010191;5.00e-07;21!UBERON:0000055;8.53e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0004573;7.62e-08;33!UBERON:0004571;7.62e-08;33!UBERON:0002384;8.06e-08;198!UBERON:0001637;1.07e-07;42!UBERON:0003509;1.07e-07;42!UBERON:0004572;1.07e-07;42!UBERON:0002199;1.10e-07;46!UBERON:0002416;1.10e-07;46!UBERON:0007500;1.47e-07;56!UBERON:0001981;1.47e-07;56!UBERON:0004537;1.47e-07;56!UBERON:0002097;2.10e-07;41!UBERON:0003102;2.98e-07;50!UBERON:0000947;5.00e-07;21!UBERON:0010191;5.00e-07;21!UBERON:0000055;8.53e-07;65 | ||
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|phase1_expression=13.2625216867506,45.8175121126704,16.0688020669407,24.0175916047513,13.8557939272459,18.3191090061077,7.59899634504932,7.58063848112197,13.3204670381918,7.12628415854376,20.9340350391728,6.55324116390517,6.06664049925443,15.3470277670458,21.2094320465866,18.1527789541979,19.2862248967673,21.9093027116212,16.1017823600867,3.44738962615006,8.56802903225863,4.07491137921514,2.0036519099174,4.65373045247806,3.13856598987007,0,0,0,0,0,0.154816123316076,7.35536979583142,5.72291245678675,6.65557218300218,0,0,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,6.03630773733273,6.77671577770711,26.0236189716888,14.5387994084408,27.8105316404782,6.36228757640879,7.78615792484217,1.70162670895322,5.5432349365641,3.33772185633879,2.0956652079634,8.74308691902101,6.3033355273353,0,0,0,0,0,0,4.96906018416763,3.4409383804245,6.59566953054429,6.21838736116411,8.38998872419812,13.7559020970034,7.73281376186199,6.20200222006389,4.98072767761394,9.0374565446461,11.2792208790561,4.56163263431108,23.1858954670761,10.6622293300302,13.7724131139899,7.5011771758627,4.04152870727106,6.53146586803269,4.5994991239765,6.6448596169769,4.76324534219059,0,0,11.3384453557059,19.3819061161174,12.663051166458,7.0176865831006,11.4734648299525,15.9600771989261,3.92474320099615,12.8098794875646,13.0733800661095,1.55605517699883,4.17603083416033,6.53847612453835,11.9572367839496,12.09969441408,5.62371436401112,5.93104145977609,6.84566185853339,11.5075484024887,3.05329696473789,4.37056949793955,4.6348766211742,6.53293348015658,9.45824243300613,10.9525328046311,8.31602000097437,28.6829637963126,14.5625817910084,26.5888712472008,7.07011678607078,11.7611408679646,2.49357703935765,8.34057479673592,15.324389789951,7.21142682751665,5.78504134116107,30.4962380671065,16.0168041613926,16.7426201916054,12.0036438433761,14.0151439764277,28.0828188649736,15.8199327881851,11.4767905924061,11.4001296038602,30.0396191350496,11.2300876343605,11.3152239773168,24.1406522911298,9.97445772453639,14.243089754081,2.31913023795956,4.09119180886252,2.29443676311203,0.121973706129595,0.265059536642971,0.813357600086629,0.414644220061482,0.504641701751257,0.72995471815166,4.69348596989448,27.6593603422941,11.0507937081984,34.3632266743665,25.9876613401051,4.96888560167344,4.88895601226495,3.85617647813571,5.84558055481688,5.01122721412534,4.03360052488864,4.71909578560575,4.12065076763227,3.8474715694639,16.9775754563669,14.0241773803446,11.5240723172792,14.7008711385542,0,0,1.18157981336281,0,0.491953754172454,7.54898365313512,11.8530308241316,11.240175325762,3.82010095164197,11.5735556448162,5.86454949558584,11.4392826380754,11.5465073620219,1.507095264676,2.58299127318808,4.61972632835436,7.40776820122577,6.08813287150714,0,0,0,0,0,3.74935335947108,6.04735661515894,5.10390350072591,5.91086249838799,4.94077695473735,3.06706143332169,0,0,0.414656231081544,0,0,1.52394946301206,2.67391897890794,2.34434894420094,5.13217338068116,4.31875469353959,7.20823338825402,2.28661146104463,4.59737445815979,4.79556075716608,7.99387315448355,4.13669490424889,75.1078536288953,13.524844040896,19.1475443941107,14.5610411675913,6.68739173081569,7.09245660116391,7.45982101245078,18.444161181901,30.9294315073123,5.76268235746538,3.90883421152482,12.0833262572466,3.95975936466715,2.71295439353627,0.871533458600294,8.29775826811074,0,0,0,13.6586167630202,22.9723871668228,1.42636905040718,9.26600362672507,16.4381058040307,5.37182889719687,0,0,0,0,4.57370323600434,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,20.8575535922538,29.5100607425209,11.3931309953889,42.8419974753463,71.5500245076619,32.6443999120245,25.0682628084406,5.41702979509894,15.9185252839189,5.17365356462525,15.277188766315,5.7154442247928,13.1194257846805,25.0625481552308,12.3531632571908,0,0,0,4.54691357169389,21.6366071363646,11.7932214398575,20.5929480489585,15.3461973288062,28.6273296321735,19.0927332390994,12.7926812266676,26.3800430675516,22.2627099667486,20.3556795819505,9.23320971628261,9.77313156564329,24.4049581716302,13.2479831444354,0.362578348774867,16.2410240945661,6.62983120338454,11.9407026091191,27.677857537021,27.9295003863573,2.70719767744447,5.08301224889137,7.84349769176855,2.92278449306521,4.01096189792928,7.96133688496276,11.9065593693561,9.93213214069841,24.6763604304463,6.77366093859632,7.5253466078228,3.3133915495855,3.3243040357149,4.70136984916574,0,0,1.28225062558195,4.59220503979588,5.20605431462885,1.854738209659,0.915694648183434,0.41254749960294,8.03971753194641,33.8031327938991,32.1367859688319,7.54031602678551,6.31599330170042,7.98219108575874,4.27293374702045,6.66005518183296,11.1662854313956,6.13631717395926,10.505780206315,8.09896085268793,10.7626437724459,2.67986696238627,11.5319870175327,48.3439371269177,22.0368642781448,3.485186350803,5.852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| ||
|short_description=p3@AK301380 | |short_description=p3@AK301380 | ||
}} | }} |
Latest revision as of 00:32, 19 September 2015
Short description: | p3@AK301380 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK301380_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | -269bp_to_AK301380_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.36e-21 | 76 |
mesodermal cell | 1.50e-21 | 121 |
embryonic cell | 2.92e-17 | 250 |
muscle precursor cell | 4.35e-14 | 58 |
myoblast | 4.35e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.35e-14 | 58 |
muscle cell | 2.83e-13 | 55 |
smooth muscle cell | 1.42e-11 | 43 |
smooth muscle myoblast | 1.42e-11 | 43 |
electrically responsive cell | 1.05e-10 | 61 |
electrically active cell | 1.05e-10 | 61 |
lining cell | 1.20e-08 | 58 |
barrier cell | 1.20e-08 | 58 |
skin fibroblast | 3.07e-08 | 23 |
preadipocyte | 1.54e-07 | 12 |
meso-epithelial cell | 3.71e-07 | 45 |
vascular associated smooth muscle cell | 4.65e-07 | 32 |