FFCP PHASE1:Hg19::chr20:37493438..37493456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:37493438..37493456,- | |||
|coexpression_cluster_id=C1355 | |coexpression_cluster_id=C1355 | ||
|description=CAGE_peak_at_chr20:37493438..37493456,- | |description=CAGE_peak_at_chr20:37493438..37493456,- | ||
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|ontology_enrichment_celltype=CL:0000623!1.04e-54!3;CL:0000825!1.04e-54!3;CL:0000791!2.98e-25!18;CL:0000789!2.98e-25!18;CL:0002420!2.98e-25!18;CL:0002419!2.98e-25!18;CL:0000790!2.98e-25!18;CL:0000898!3.38e-25!3;CL:0000838!7.44e-22!52;CL:0000542!1.95e-21!53;CL:0000051!1.95e-21!53;CL:0000810!1.30e-19!1;CL:0000895!1.30e-19!1;CL:0002436!1.30e-19!1;CL:0002427!1.30e-19!1;CL:0002428!1.30e-19!1;CL:0002429!1.30e-19!1;CL:0002433!1.30e-19!1;CL:0002431!1.30e-19!1;CL:0002432!1.30e-19!1;CL:0000084!3.07e-18!25;CL:0000827!3.07e-18!25;CL:0002087!1.55e-17!119;CL:0000625!1.76e-15!11;CL:0000738!7.88e-15!140;CL:0002031!7.89e-14!124;CL:0000624!4.01e-13!6;CL:0000037!5.82e-12!172;CL:0000566!5.82e-12!172;CL:0000988!2.87e-11!182;CL:0000893!1.72e-10!2;CL:0002489!1.72e-10!2;CL:0000809!1.72e-10!2;CL:0000808!1.72e-10!2;CL:0000894!1.72e-10!2;CL:0000806!1.72e-10!2;CL:0000807!1.72e-10!2;CL:0000805!1.72e-10!2;CL:0002425!1.72e-10!2;CL:0000815!2.07e-10!2;CL:0000792!2.07e-10!2;CL:0002677!2.07e-10!2;CL:0002032!3.03e-10!165;CL:0000837!3.03e-10!165;CL:0002393!7.16e-09!9;CL:0002397!7.16e-09!9;CL:0000842!3.16e-07!3 | |ontology_enrichment_celltype=CL:0000623!1.04e-54!3;CL:0000825!1.04e-54!3;CL:0000791!2.98e-25!18;CL:0000789!2.98e-25!18;CL:0002420!2.98e-25!18;CL:0002419!2.98e-25!18;CL:0000790!2.98e-25!18;CL:0000898!3.38e-25!3;CL:0000838!7.44e-22!52;CL:0000542!1.95e-21!53;CL:0000051!1.95e-21!53;CL:0000810!1.30e-19!1;CL:0000895!1.30e-19!1;CL:0002436!1.30e-19!1;CL:0002427!1.30e-19!1;CL:0002428!1.30e-19!1;CL:0002429!1.30e-19!1;CL:0002433!1.30e-19!1;CL:0002431!1.30e-19!1;CL:0002432!1.30e-19!1;CL:0000084!3.07e-18!25;CL:0000827!3.07e-18!25;CL:0002087!1.55e-17!119;CL:0000625!1.76e-15!11;CL:0000738!7.88e-15!140;CL:0002031!7.89e-14!124;CL:0000624!4.01e-13!6;CL:0000037!5.82e-12!172;CL:0000566!5.82e-12!172;CL:0000988!2.87e-11!182;CL:0000893!1.72e-10!2;CL:0002489!1.72e-10!2;CL:0000809!1.72e-10!2;CL:0000808!1.72e-10!2;CL:0000894!1.72e-10!2;CL:0000806!1.72e-10!2;CL:0000807!1.72e-10!2;CL:0000805!1.72e-10!2;CL:0002425!1.72e-10!2;CL:0000815!2.07e-10!2;CL:0000792!2.07e-10!2;CL:0002677!2.07e-10!2;CL:0002032!3.03e-10!165;CL:0000837!3.03e-10!165;CL:0002393!7.16e-09!9;CL:0002397!7.16e-09!9;CL:0000842!3.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000895;4.66e-66;1!CL:0000623;2.62e-23;3!CL:0000898;4.09e-23;3!CL:0000791;9.75e-16;18!CL:0000789;9.75e-16;18!CL:0002419;9.75e-16;18!CL:0000624;2.74e-12;6!CL:0000084;1.15e-11;25!CL:0000542;3.86e-10;53!CL:0000625;2.47e-07;11 | |ontology_enrichment_celltype_v019=CL:0000895;4.66e-66;1!CL:0000623;2.62e-23;3!CL:0000898;4.09e-23;3!CL:0000791;9.75e-16;18!CL:0000789;9.75e-16;18!CL:0002419;9.75e-16;18!CL:0000624;2.74e-12;6!CL:0000084;1.15e-11;25!CL:0000542;3.86e-10;53!CL:0000625;2.47e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,4.66e-66,1;CL:0000895,4.66e-66,1;CL:0002436,4.66e-66,1;CL:0002427,4.66e-66,1;CL:0002428,4.66e-66,1;CL:0002429,4.66e-66,1;CL:0002433,4.66e-66,1;CL:0002431,4.66e-66,1;CL:0002432,4.66e-66,1;CL:0000893,7.05e-34,2;CL:0002489,7.05e-34,2;CL:0000809,7.05e-34,2;CL:0000808,7.05e-34,2;CL:0000894,7.05e-34,2;CL:0000806,7.05e-34,2;CL:0000807,7.05e-34,2;CL:0000805,7.05e-34,2;CL:0002425,7.05e-34,2;CL:0000623,2.62e-23,3;CL:0000825,2.62e-23,3;CL:0000898,4.09e-23,3;CL:0000791,9.75e-16,18;CL:0000789,9.75e-16,18;CL:0002420,9.75e-16,18;CL:0002419,9.75e-16,18;CL:0000790,9.75e-16,18;CL:0000838,1.77e-12,52;CL:0000624,2.74e-12,6;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000084,1.15e-11,25;CL:0000827,1.15e-11,25;CL:0000625,2.47e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002427;4.66e-66;1!CL:0002425;7.05e-34;2!CL:0000790;9.75e-16;18!CL:0000051;3.86e-10;53 | |ontology_enrichment_development_v019=CL:0002427;4.66e-66;1!CL:0002425;7.05e-34;2!CL:0000790;9.75e-16;18!CL:0000051;3.86e-10;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,2.74e-12,6;UBERON:0004177,9.89e-11,7;UBERON:0005057,9.89e-11,7;UBERON:0000974,6.56e-08,10;UBERON:0003408,6.56e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0006562,2.63e-07,11;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p@chr20:37493438..37493456,- | |short_description=p@chr20:37493438..37493456,- | ||
}} | }} |
Latest revision as of 13:55, 28 July 2015
Short description: | p@chr20:37493438..37493456, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:37493438..37493456, - |
Coexpression cluster: | C1355_Natural_NK_CD8_CD14_Eosinophils_Peripheral_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 2.74e-12 | 6 |
hemopoietic organ | 9.89e-11 | 7 |
immune organ | 9.89e-11 | 7 |
neck | 6.56e-08 | 10 |
gland of gut | 6.56e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
pharynx | 2.63e-07 | 11 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |