FFCP PHASE1:Hg19::chr11:26743353..26743355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=159963 | |EntrezGene=159963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28750 | |HGNC=28750 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=190bp_to_ENST00000280467_5end | |association_with_transcript=190bp_to_ENST00000280467_5end | ||
|cluster_id=chr11:26743353..26743355,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_5_at_SLC5A12_5end | |description=CAGE_peak_5_at_SLC5A12_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.62e-41!1;UBERON:0006947!1.22e-14!3;UBERON:0004054!1.22e-14!3;UBERON:0002113!4.74e-14!27;UBERON:0003918!4.74e-14!27;UBERON:0005095!4.74e-14!27;UBERON:0007687!4.74e-14!27;UBERON:0000489!5.47e-12!32;UBERON:0005904!2.53e-11!4;UBERON:0006554!6.16e-09!44;UBERON:0001008!9.36e-09!45;UBERON:0005172!2.69e-07!55;UBERON:0005173!2.69e-07!55 | |ontology_enrichment_uberon=UBERON:0001301!6.62e-41!1;UBERON:0006947!1.22e-14!3;UBERON:0004054!1.22e-14!3;UBERON:0002113!4.74e-14!27;UBERON:0003918!4.74e-14!27;UBERON:0005095!4.74e-14!27;UBERON:0007687!4.74e-14!27;UBERON:0000489!5.47e-12!32;UBERON:0005904!2.53e-11!4;UBERON:0006554!6.16e-09!44;UBERON:0001008!9.36e-09!45;UBERON:0005172!2.69e-07!55;UBERON:0005173!2.69e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;9.37e-99;1!UBERON:0006947;4.27e-34;3!UBERON:0004054;4.27e-34;3!UBERON:0005904;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0003135;2.16e-10;11 | |ontology_enrichment_uberon_v019=UBERON:0001301;9.37e-99;1!UBERON:0006947;4.27e-34;3!UBERON:0004054;4.27e-34;3!UBERON:0005904;5.56e-26;4!UBERON:0000058;2.73e-11;10!UBERON:0003135;2.16e-10;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.37e-99,1;UBERON:0006947,4.27e-34,3;UBERON:0004054,4.27e-34,3;UBERON:0005904,5.56e-26,4;UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0005103,9.39e-14,8;UBERON:0000083,9.39e-14,8;UBERON:0009201,9.39e-14,8;UBERON:0006553,9.39e-14,8;UBERON:0003074,9.39e-14,8;UBERON:0003060,9.39e-14,8;UBERON:0000080,2.19e-12,9;UBERON:0002120,2.19e-12,9;UBERON:0004875,2.19e-12,9;UBERON:0005721,2.19e-12,9;UBERON:0005754,2.19e-12,9;UBERON:0007297,2.19e-12,9;UBERON:0003135,2.16e-10,11;UBERON:0004876,2.16e-10,11;UBERON:0006554,1.08e-09,47;UBERON:0003887,1.22e-09,12;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p5@SLC5A12 | |short_description=p5@SLC5A12 | ||
}} | }} |
Latest revision as of 11:33, 17 September 2015
Short description: | p5@SLC5A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC5A12_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 190bp_to_ENST00000280467_5end |
EntrezGene: | SLC5A12 |
HGNC: | 28750 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 9.37e-99 | 1 |
male genital duct | 4.27e-34 | 3 |
internal male genitalia | 4.27e-34 | 3 |
duct of male reproductive system | 5.56e-26 | 4 |
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
mesonephric epithelium | 9.39e-14 | 8 |
mesonephric tubule | 9.39e-14 | 8 |
nephric duct | 9.39e-14 | 8 |
renal duct | 9.39e-14 | 8 |
mesonephric duct | 9.39e-14 | 8 |
pronephric duct | 9.39e-14 | 8 |
mesonephros | 2.19e-12 | 9 |
pronephros | 2.19e-12 | 9 |
nephrogenic cord | 2.19e-12 | 9 |
pronephric mesoderm | 2.19e-12 | 9 |
rostral part of nephrogenic cord | 2.19e-12 | 9 |
presumptive pronephric mesoderm | 2.19e-12 | 9 |
male reproductive organ | 2.16e-10 | 11 |
urogenital ridge | 2.16e-10 | 11 |
urinary system structure | 1.08e-09 | 47 |
intraembryonic coelom | 1.22e-09 | 12 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.45e-07 | 16 |
kidney epithelium | 1.45e-07 | 16 |
compound organ | 4.47e-07 | 68 |