FFCP PHASE1:Hg19::chr10:100150986..100150988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:100150986..100150988,+ | |||
|coexpression_cluster_id=C289 | |coexpression_cluster_id=C289 | ||
|description=CAGE_peak_at_chr10:100150986..100150988,+ | |description=CAGE_peak_at_chr10:100150986..100150988,+ | ||
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|ontology_enrichment_celltype=CL:0002541!5.50e-25!3 | |ontology_enrichment_celltype=CL:0002541!5.50e-25!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.22e-14;3!CL:0000349;2.21e-09;19!CL:0002537;3.35e-09;5 | |ontology_enrichment_celltype_v019=CL:0002541;1.22e-14;3!CL:0000349;2.21e-09;19!CL:0002537;3.35e-09;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-14,3;CL:0000349,2.17e-09,19;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr10:100150986..100150988,+ | |short_description=p@chr10:100150986..100150988,+ | ||
}} | }} |
Latest revision as of 09:22, 23 July 2015
Short description: | p@chr10:100150986..100150988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:100150986..100150988, + |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-14 | 3 |
extraembryonic cell | 2.17e-09 | 19 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 4.66e-21 | 2 |
Ammon's horn | 6.96e-21 | 2 |
lobe parts of cerebral cortex | 6.96e-21 | 2 |
hippocampal formation | 6.96e-21 | 2 |
limbic lobe | 6.96e-21 | 2 |
regional part of cerebral cortex | 2.85e-16 | 22 |
egg chorion | 1.22e-14 | 3 |
frontal cortex | 1.60e-14 | 3 |
cerebral cortex | 1.70e-14 | 25 |
pallium | 1.70e-14 | 25 |
extraembryonic membrane | 2.24e-12 | 14 |
membranous layer | 2.24e-12 | 14 |
regional part of telencephalon | 1.33e-11 | 32 |
cerebral hemisphere | 1.33e-11 | 32 |
brain grey matter | 5.49e-11 | 34 |
gray matter | 5.49e-11 | 34 |
telencephalon | 5.49e-11 | 34 |
regional part of forebrain | 2.74e-09 | 41 |
forebrain | 2.74e-09 | 41 |
anterior neural tube | 2.74e-09 | 41 |
future forebrain | 2.74e-09 | 41 |
occipital lobe | 2.74e-09 | 5 |
limbic system | 3.49e-09 | 5 |
neocortex | 1.37e-08 | 20 |
gyrus | 6.34e-08 | 6 |
extraembryonic structure | 1.23e-07 | 24 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |
chorion | 5.08e-07 | 7 |
amnion | 6.04e-07 | 7 |