FFCP PHASE1:Hg19::chr10:64018685..64018702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64018685..64018702,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:64018685..64018702,- | |description=CAGE_peak_at_chr10:64018685..64018702,- | ||
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|ontology_enrichment_celltype=CL:0002057!5.79e-114!42;CL:0000860!5.95e-106!45;CL:0002194!1.22e-72!63;CL:0000576!1.22e-72!63;CL:0000040!1.22e-72!63;CL:0000559!1.22e-72!63;CL:0002009!3.01e-70!65;CL:0000766!1.25e-67!76;CL:0000839!7.41e-65!70;CL:0000557!7.22e-64!71;CL:0000763!5.28e-44!112;CL:0000049!5.28e-44!112;CL:0002087!6.03e-41!119;CL:0000738!1.17e-38!140;CL:0002031!1.59e-36!124;CL:0000037!2.97e-30!172;CL:0000566!2.97e-30!172;CL:0002032!8.48e-30!165;CL:0000837!8.48e-30!165;CL:0000988!3.14e-28!182;CL:0000134!5.50e-11!358;CL:0002320!1.22e-10!365;CL:0000219!2.01e-09!390;CL:0000034!2.97e-08!444;CL:0000048!5.76e-08!430;CL:0000723!9.28e-08!436;CL:0000767!1.32e-07!3;CL:0002623!1.62e-07!3 | |ontology_enrichment_celltype=CL:0002057!5.79e-114!42;CL:0000860!5.95e-106!45;CL:0002194!1.22e-72!63;CL:0000576!1.22e-72!63;CL:0000040!1.22e-72!63;CL:0000559!1.22e-72!63;CL:0002009!3.01e-70!65;CL:0000766!1.25e-67!76;CL:0000839!7.41e-65!70;CL:0000557!7.22e-64!71;CL:0000763!5.28e-44!112;CL:0000049!5.28e-44!112;CL:0002087!6.03e-41!119;CL:0000738!1.17e-38!140;CL:0002031!1.59e-36!124;CL:0000037!2.97e-30!172;CL:0000566!2.97e-30!172;CL:0002032!8.48e-30!165;CL:0000837!8.48e-30!165;CL:0000988!3.14e-28!182;CL:0000134!5.50e-11!358;CL:0002320!1.22e-10!365;CL:0000219!2.01e-09!390;CL:0000034!2.97e-08!444;CL:0000048!5.76e-08!430;CL:0000723!9.28e-08!436;CL:0000767!1.32e-07!3;CL:0002623!1.62e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.40e-101;33!CL:0002057;6.40e-101;33!CL:0000473;1.34e-69;39!CL:0000234;1.34e-69;39!CL:0000576;1.09e-59;48!CL:0000766;7.21e-36;69!CL:0002087;5.38e-16;104!CL:0000763;6.43e-15;100!CL:0002393;3.40e-11;6!CL:0002397;3.40e-11;6!CL:0000738;3.30e-09;136 | |ontology_enrichment_celltype_v019=CL:0000860;6.40e-101;33!CL:0002057;6.40e-101;33!CL:0000473;1.34e-69;39!CL:0000234;1.34e-69;39!CL:0000576;1.09e-59;48!CL:0000766;7.21e-36;69!CL:0002087;5.38e-16;104!CL:0000763;6.43e-15;100!CL:0002393;3.40e-11;6!CL:0002397;3.40e-11;6!CL:0000738;3.30e-09;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.92e-111,42;CL:0002057,3.92e-111,42;CL:0000473,9.68e-97,48;CL:0000234,9.68e-97,48;CL:0002194,1.39e-76,59;CL:0000576,1.39e-76,59;CL:0000040,1.39e-76,59;CL:0000559,1.39e-76,59;CL:0002009,5.56e-74,61;CL:0000839,3.73e-68,66;CL:0000766,3.22e-67,72;CL:0000557,4.31e-67,67;CL:0000763,1.23e-43,108;CL:0000049,1.23e-43,108;CL:0002087,1.34e-37,115;CL:0002031,7.18e-36,120;CL:0000738,7.63e-34,136;CL:0002032,5.94e-28,161;CL:0000837,5.94e-28,161;CL:0000037,1.30e-26,168;CL:0000988,4.78e-25,177;CL:0000134,2.69e-10,354;CL:0002320,5.24e-10,361;CL:0000219,5.51e-09,386;CL:0000034,3.28e-08,441;CL:0000048,9.88e-08,427;CL:0002393,1.26e-07,9;CL:0002397,1.26e-07,9;CL:0000723,1.47e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-83;42!CL:0000049;1.76e-10;108 | |ontology_enrichment_development_v019=CL:0002057;1.81e-83;42!CL:0000049;1.76e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.55e-56!80;UBERON:0001474!9.18e-52!86;UBERON:0002390!1.06e-45!102;UBERON:0003061!1.06e-45!102;UBERON:0004765!3.25e-43!101;UBERON:0001434!3.25e-43!101;UBERON:0002193!4.40e-41!112;UBERON:0002405!3.16e-37!115;UBERON:0002204!1.04e-23!167;UBERON:0003081!3.02e-18!216;UBERON:0002384!3.60e-10!375;UBERON:0000926!2.35e-07!448;UBERON:0004120!2.35e-07!448;UBERON:0006603!2.35e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!4.55e-56!80;UBERON:0001474!9.18e-52!86;UBERON:0002390!1.06e-45!102;UBERON:0003061!1.06e-45!102;UBERON:0004765!3.25e-43!101;UBERON:0001434!3.25e-43!101;UBERON:0002193!4.40e-41!112;UBERON:0002405!3.16e-37!115;UBERON:0002204!1.04e-23!167;UBERON:0003081!3.02e-18!216;UBERON:0002384!3.60e-10!375;UBERON:0000926!2.35e-07!448;UBERON:0004120!2.35e-07!448;UBERON:0006603!2.35e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.08e-59,76;UBERON:0001474,3.21e-54,82;UBERON:0004765,4.36e-49,90;UBERON:0002405,2.18e-47,93;UBERON:0002390,8.80e-45,98;UBERON:0003061,8.80e-45,98;UBERON:0001434,8.22e-44,100;UBERON:0002193,2.75e-40,108;UBERON:0002204,1.25e-24,167;UBERON:0003081,1.65e-19,203;UBERON:0000926,5.40e-11,315;UBERON:0004120,5.40e-11,315;UBERON:0006603,5.40e-11,315;UBERON:0002384,1.30e-09,371 | |||
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|short_description=p@chr10:64018685..64018702,- | |short_description=p@chr10:64018685..64018702,- | ||
}} | }} |
Latest revision as of 14:38, 23 July 2015
Short description: | p@chr10:64018685..64018702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64018685..64018702, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.92e-111 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.92e-111 | 42 |
defensive cell | 9.68e-97 | 48 |
phagocyte | 9.68e-97 | 48 |
monopoietic cell | 1.39e-76 | 59 |
monocyte | 1.39e-76 | 59 |
monoblast | 1.39e-76 | 59 |
promonocyte | 1.39e-76 | 59 |
macrophage dendritic cell progenitor | 5.56e-74 | 61 |
myeloid lineage restricted progenitor cell | 3.73e-68 | 66 |
myeloid leukocyte | 3.22e-67 | 72 |
granulocyte monocyte progenitor cell | 4.31e-67 | 67 |
myeloid cell | 1.23e-43 | 108 |
common myeloid progenitor | 1.23e-43 | 108 |
nongranular leukocyte | 1.34e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 7.18e-36 | 120 |
leukocyte | 7.63e-34 | 136 |
hematopoietic oligopotent progenitor cell | 5.94e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.94e-28 | 161 |
hematopoietic stem cell | 1.30e-26 | 168 |
hematopoietic cell | 4.78e-25 | 177 |
mesenchymal cell | 2.69e-10 | 354 |
connective tissue cell | 5.24e-10 | 361 |
motile cell | 5.51e-09 | 386 |
stem cell | 3.28e-08 | 441 |
multi fate stem cell | 9.88e-08 | 427 |
intermediate monocyte | 1.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.26e-07 | 9 |
somatic stem cell | 1.47e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.08e-59 | 76 |
bone element | 3.21e-54 | 82 |
skeletal element | 4.36e-49 | 90 |
immune system | 2.18e-47 | 93 |
hematopoietic system | 8.80e-45 | 98 |
blood island | 8.80e-45 | 98 |
skeletal system | 8.22e-44 | 100 |
hemolymphoid system | 2.75e-40 | 108 |
musculoskeletal system | 1.25e-24 | 167 |
lateral plate mesoderm | 1.65e-19 | 203 |
mesoderm | 5.40e-11 | 315 |
mesoderm-derived structure | 5.40e-11 | 315 |
presumptive mesoderm | 5.40e-11 | 315 |
connective tissue | 1.30e-09 | 371 |