FFCP PHASE1:Hg19::chr18:5238588..5238635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_uc002kmn.1_5end | |association_with_transcript=-63bp_to_uc002kmn.1_5end | ||
|cluster_id=chr18:5238588..5238635,- | |||
|coexpression_cluster_id=C304 | |coexpression_cluster_id=C304 | ||
|description=CAGE_peak_1_at_uc002kmn.1_5end | |description=CAGE_peak_1_at_uc002kmn.1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!2.79e-07!12;CL:0000417!2.79e-07!12;CL:0000668!2.79e-07!12;CL:0000414!2.79e-07!12;CL:0000412!2.79e-07!12;CL:0000182!2.79e-07!12 | |ontology_enrichment_celltype=CL:0000181!2.79e-07!12;CL:0000417!2.79e-07!12;CL:0000668!2.79e-07!12;CL:0000414!2.79e-07!12;CL:0000412!2.79e-07!12;CL:0000182!2.79e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.53e-25;12!CL:0000511;3.96e-07;1!CL:0002625;3.96e-07;1!CL:0000216;3.96e-07;1!CL:0002563;4.63e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;4.53e-25;12!CL:0000511;3.96e-07;1!CL:0002625;3.96e-07;1!CL:0000216;3.96e-07;1!CL:0002563;4.63e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.45e-25,12;CL:0000223,6.11e-11,58;CL:0000511,3.20e-07,1;CL:0002625,3.20e-07,1;CL:0000216,3.20e-07,1;CL:0002563,4.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.09e-27;11!UBERON:0009497;1.14e-22;13!UBERON:0003104;4.54e-18;31!CL:0000223;1.69e-07;58!UBERON:0006242;2.83e-07;1!UBERON:0008801;3.96e-07;1!UBERON:0001041;5.26e-07;30 | |ontology_enrichment_development_v019=UBERON:0004161;6.09e-27;11!UBERON:0009497;1.14e-22;13!UBERON:0003104;4.54e-18;31!CL:0000223;1.69e-07;58!UBERON:0006242;2.83e-07;1!UBERON:0008801;3.96e-07;1!UBERON:0001041;5.26e-07;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!6.04e-09!54;UBERON:0009854!2.46e-08!23;UBERON:0005409!6.27e-08!35;UBERON:0004733!1.23e-07!12;UBERON:0002028!1.23e-07!12;UBERON:0007277!1.23e-07!12;UBERON:0008835!1.34e-07!22;UBERON:0003894!1.34e-07!22;UBERON:0009497!2.40e-07!25;UBERON:0000015!2.40e-07!25;UBERON:0002423!2.40e-07!25;UBERON:0006235!2.40e-07!25;UBERON:0004161!2.40e-07!25;UBERON:0002107!4.36e-07!19;UBERON:0006925!4.36e-07!19;UBERON:0008836!4.36e-07!19;UBERON:0004921!5.42e-07!129;UBERON:0004185!5.42e-07!129;UBERON:0000481!5.83e-07!347;UBERON:0004732!7.98e-07!13;UBERON:0009856!8.20e-07!26 | |ontology_enrichment_uberon=UBERON:0003929!6.04e-09!54;UBERON:0009854!2.46e-08!23;UBERON:0005409!6.27e-08!35;UBERON:0004733!1.23e-07!12;UBERON:0002028!1.23e-07!12;UBERON:0007277!1.23e-07!12;UBERON:0008835!1.34e-07!22;UBERON:0003894!1.34e-07!22;UBERON:0009497!2.40e-07!25;UBERON:0000015!2.40e-07!25;UBERON:0002423!2.40e-07!25;UBERON:0006235!2.40e-07!25;UBERON:0004161!2.40e-07!25;UBERON:0002107!4.36e-07!19;UBERON:0006925!4.36e-07!19;UBERON:0008836!4.36e-07!19;UBERON:0004921!5.42e-07!129;UBERON:0004185!5.42e-07!129;UBERON:0000481!5.83e-07!347;UBERON:0004732!7.98e-07!13;UBERON:0009856!8.20e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.57e-25;19!UBERON:0006925;1.57e-25;19!UBERON:0002423;2.19e-23;25!UBERON:0002365;4.94e-18;31!UBERON:0002330;4.94e-18;31!UBERON:0000160;4.77e-16;17!UBERON:0005409;6.00e-16;22!UBERON:0002368;7.76e-13;33!UBERON:0002108;6.95e-12;4!UBERON:0004921;1.05e-11;33!UBERON:0001007;6.33e-11;81!UBERON:0000949;8.73e-11;43!UBERON:0005172;2.48e-09;52!UBERON:0005173;2.48e-09;52!UBERON:0002417;4.71e-08;58!UBERON:0000916;4.71e-08;58!UBERON:0001831;3.96e-07;1!UBERON:0001136;3.96e-07;1!UBERON:0001343;3.96e-07;1!UBERON:0004910;3.96e-07;1!UBERON:0004813;3.96e-07;1!UBERON:0001567;3.96e-07;1!UBERON:0001242;4.63e-07;4!UBERON:0001262;4.63e-07;4!UBERON:0004786;4.63e-07;4!UBERON:0004808;4.63e-07;4!UBERON:0001277;4.63e-07;4!UBERON:0002530;8.72e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.57e-25;19!UBERON:0006925;1.57e-25;19!UBERON:0002423;2.19e-23;25!UBERON:0002365;4.94e-18;31!UBERON:0002330;4.94e-18;31!UBERON:0000160;4.77e-16;17!UBERON:0005409;6.00e-16;22!UBERON:0002368;7.76e-13;33!UBERON:0002108;6.95e-12;4!UBERON:0004921;1.05e-11;33!UBERON:0001007;6.33e-11;81!UBERON:0000949;8.73e-11;43!UBERON:0005172;2.48e-09;52!UBERON:0005173;2.48e-09;52!UBERON:0002417;4.71e-08;58!UBERON:0000916;4.71e-08;58!UBERON:0001831;3.96e-07;1!UBERON:0001136;3.96e-07;1!UBERON:0001343;3.96e-07;1!UBERON:0004910;3.96e-07;1!UBERON:0004813;3.96e-07;1!UBERON:0001567;3.96e-07;1!UBERON:0001242;4.63e-07;4!UBERON:0001262;4.63e-07;4!UBERON:0004786;4.63e-07;4!UBERON:0004808;4.63e-07;4!UBERON:0001277;4.63e-07;4!UBERON:0002530;8.72e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.57e-25,19;UBERON:0006925,1.57e-25,19;UBERON:0008836,1.57e-25,19;UBERON:0009497,2.19e-23,25;UBERON:0000015,2.19e-23,25;UBERON:0002423,2.19e-23,25;UBERON:0006235,2.19e-23,25;UBERON:0004161,2.19e-23,25;UBERON:0008835,7.59e-22,22;UBERON:0003894,7.59e-22,22;UBERON:0009854,7.86e-21,23;UBERON:0007499,4.81e-19,25;UBERON:0002365,1.87e-18,31;UBERON:0002330,1.87e-18,31;UBERON:0009856,2.97e-18,26;UBERON:0003929,6.11e-17,54;UBERON:0000160,5.12e-16,17;UBERON:0004921,7.88e-15,118;UBERON:0005172,2.66e-14,54;UBERON:0005173,2.66e-14,54;UBERON:0005409,5.72e-14,25;UBERON:0002368,3.59e-13,35;UBERON:0001007,8.89e-13,145;UBERON:0001555,8.89e-13,145;UBERON:0007026,8.89e-13,145;UBERON:0002417,1.22e-12,60;UBERON:0000916,1.22e-12,60;UBERON:0000949,3.07e-12,45;UBERON:0002108,7.48e-12,4;UBERON:0004119,3.36e-11,160;UBERON:0000925,3.36e-11,160;UBERON:0006595,3.36e-11,160;UBERON:0002530,8.85e-11,59;UBERON:0005911,2.84e-10,82;UBERON:0005177,7.67e-08,101;UBERON:0001136,3.20e-07,1;UBERON:0001343,3.20e-07,1;UBERON:0004910,3.20e-07,1;UBERON:0005154,3.20e-07,1;UBERON:0005295,3.20e-07,1;UBERON:0004813,3.20e-07,1;UBERON:0005297,3.20e-07,1;UBERON:0005294,3.20e-07,1;UBERON:0010141,3.20e-07,1;UBERON:0005891,3.20e-07,1;UBERON:0001831,4.34e-07,1;UBERON:0001567,4.34e-07,1;UBERON:0008801,4.34e-07,1;UBERON:0001242,4.92e-07,4;UBERON:0001262,4.92e-07,4;UBERON:0004786,4.92e-07,4;UBERON:0004808,4.92e-07,4;UBERON:0001277,4.92e-07,4;UBERON:0011216,9.08e-07,223 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0.175669571386252,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,20.2808055714929,8.84544495009863,10.6342183202653,0,4.05861847192275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,1.03985430765404,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0,0.0821271560138091,0,0,4.83437798366489,0,0,0.114814448164607,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,3.60643540767028,0,0.165018999841176,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.552567831062295,3.77899121781414,0.20453736500431,0.123084805461069,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0.886642856860642,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25112064298064,0.216388639742091,0,6.28048707973708,3.66618086960175,0,0,0.104421949505455,0.404406797884062,0,0.234264445725339,0,0,0,0,3.62972148145992,0,0.379119477770928,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0,2.34798294213288,0,1.44090417154106,0,1.37275998289572,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,10.2418136999391,10.6316457311705,8.4928465256273,0.590564889088493,0,0,0.136203406111576,0,0,0.415440338029185,0.899895566206002,0.77380195455795,0,0.335434687599266,5.35878809634548,1.31136470337495,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.511164065356265,0,9.96555189010961,5.30027555648885,0.517131825446202,0.26446520348538,0.513260513652988,0,0,0.157204305099666,0,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,3.90757005616546,0,0,0.295712172434091,0.270150338473579,0,0,0.126831620387814,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0.714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0.294450700845729,2.68219434960993,0,0.205325613712494,0,0,0,0,0,0,0,0,12.8109102459188,8.30526329915038,0,0,0.235676547101626,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0.160482733378337,0.730336388246517,0,0,0.15777156219318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| ||
|short_description=p1@uc002kmn.1 | |short_description=p1@uc002kmn.1 | ||
}} | }} |
Latest revision as of 01:20, 26 July 2015
Short description: | p1@uc002kmn.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002kmn.1_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -63bp_to_uc002kmn.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.45e-25 | 12 |
endodermal cell | 6.11e-11 | 58 |
androgen binding protein secreting cell | 3.20e-07 | 1 |
seminiferous tubule epithelial cell | 3.20e-07 | 1 |
Sertoli cell | 3.20e-07 | 1 |
intestinal epithelial cell | 4.92e-07 | 4 |