FFCP PHASE1:Hg19::chr22:20307537..20307590,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:20307537..20307590,-
|short_description=p1@DGCR6L
|description=CAGE_peak_1_at_DGCR6L_5end
|association_with_transcript=-5bp_to_ENST00000405465_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85359 | |EntrezGene=85359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18551 | |HGNC=18551 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCQ4 | |UniProt=B5MCQ4 | ||
|association_with_transcript=-5bp_to_ENST00000405465_5end | |||
|cluster_id=chr22:20307537..20307590,- | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_DGCR6L_5end | |||
|id=chr22:20307537..20307590,- | |||
|ontology_enrichment_celltype=CL:0000055!9.72e-13!180;CL:0000183!1.05e-12!59;CL:0000192!1.97e-11!42;CL:0000514!1.97e-11!42;CL:0000393!6.35e-11!60;CL:0000211!6.35e-11!60;CL:0000680!1.06e-10!57;CL:0000056!1.06e-10!57;CL:0000355!1.06e-10!57;CL:0000187!1.65e-10!54;CL:0000222!3.02e-10!119;CL:0000359!5.31e-10!32;CL:0000220!1.91e-09!246;CL:0002321!2.57e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.58e-09;32!CL:0000192;1.97e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.40e-11,43;CL:0000514,2.40e-11,43;CL:0000393,6.84e-11,61;CL:0000211,6.84e-11,61;CL:0000680,1.15e-10,58;CL:0000056,1.15e-10,58;CL:0000355,1.15e-10,58;CL:0000222,1.63e-10,121;CL:0000187,1.81e-10,55;CL:0000359,5.31e-10,32;CL:0002321,1.47e-09,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.97e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.43e-12!83;UBERON:0002329!5.43e-12!83;UBERON:0003077!5.43e-12!83;UBERON:0003059!5.43e-12!83;UBERON:0007282!5.43e-12!83;UBERON:0009618!5.43e-12!83;UBERON:0007285!5.43e-12!83;UBERON:0004290!6.34e-12!70;UBERON:0001134!6.86e-11!61;UBERON:0002036!6.86e-11!61;UBERON:0003082!6.86e-11!61;UBERON:0000486!1.42e-10!82;UBERON:0002385!2.37e-10!63;UBERON:0001015!2.37e-10!63;UBERON:0000383!2.37e-10!63;UBERON:0005256!4.42e-10!143;UBERON:0004872!8.23e-10!84;UBERON:0003914!8.44e-10!118;UBERON:0002049!1.08e-09!79;UBERON:0007798!1.08e-09!79;UBERON:0001637!1.85e-09!42;UBERON:0003509!1.85e-09!42;UBERON:0004572!1.85e-09!42;UBERON:0001981!1.13e-08!60;UBERON:0007500!1.13e-08!60;UBERON:0004537!1.13e-08!60;UBERON:0006965!1.13e-08!60;UBERON:0000490!5.07e-08!138;UBERON:0000055!7.75e-08!69;UBERON:0002100!1.63e-07!216;UBERON:0001009!2.66e-07!113;UBERON:0000483!3.80e-07!309;UBERON:0004573!4.37e-07!33;UBERON:0004571!4.37e-07!33;UBERON:0000119!4.42e-07!312;UBERON:0000475!4.45e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.89e-14,78;UBERON:0007524,2.80e-12,73;UBERON:0003077,6.64e-12,72;UBERON:0007285,6.64e-12,72;UBERON:0002329,6.73e-12,71;UBERON:0003059,6.73e-12,71;UBERON:0007282,6.73e-12,71;UBERON:0004290,6.73e-12,71;UBERON:0009618,6.73e-12,71;UBERON:0001134,7.36e-11,62;UBERON:0002036,7.36e-11,62;UBERON:0003082,7.36e-11,62;UBERON:0000486,1.44e-10,83;UBERON:0002385,2.50e-10,64;UBERON:0001015,2.50e-10,64;UBERON:0000383,2.50e-10,64;UBERON:0003914,8.78e-10,117;UBERON:0004872,1.08e-09,83;UBERON:0002049,1.42e-09,78;UBERON:0007798,1.42e-09,78;UBERON:0001637,1.85e-09,42;UBERON:0003509,1.85e-09,42;UBERON:0004572,1.85e-09,42;UBERON:0003104,2.07e-09,160;UBERON:0009142,2.07e-09,160;UBERON:0005256,3.03e-09,122;UBERON:0000490,4.68e-09,148;UBERON:0007500,1.46e-08,59;UBERON:0001981,1.46e-08,59;UBERON:0004537,1.46e-08,59;UBERON:0006965,1.46e-08,59;UBERON:0000483,4.96e-08,306;UBERON:0000119,5.87e-08,309;UBERON:0000055,1.01e-07,68;UBERON:0001009,3.40e-07,112;UBERON:0004573,4.37e-07,33;UBERON:0004571,4.37e-07,33;UBERON:0002100,6.54e-07,199 | |||
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| ||
|short_description=p1@DGCR6L | |||
}} | }} |
Latest revision as of 04:46, 19 September 2015
Short description: | p1@DGCR6L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DGCR6L_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | -5bp_to_ENST00000405465_5end |
EntrezGene: | DGCR6L |
HGNC: | 18551 |
UniProt: | B5MCQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.40e-11 | 43 |
smooth muscle myoblast | 2.40e-11 | 43 |
electrically responsive cell | 6.84e-11 | 61 |
electrically active cell | 6.84e-11 | 61 |
muscle precursor cell | 1.15e-10 | 58 |
myoblast | 1.15e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-10 | 58 |
mesodermal cell | 1.63e-10 | 121 |
muscle cell | 1.81e-10 | 55 |
vascular associated smooth muscle cell | 5.31e-10 | 32 |
embryonic cell | 1.47e-09 | 250 |