FFCP PHASE1:Hg19::chr22:32058416..32058430,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:32058416..32058430,-
|short_description=p17@PISD
|description=CAGE_peak_17_at_PISD_5end
|association_with_transcript=0bp_to_ENST00000439502_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23761 | |EntrezGene=23761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8999 | |HGNC=8999 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439502_5end | |||
|cluster_id=chr22:32058416..32058430,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_PISD_5end | |||
|id=chr22:32058416..32058430,- | |||
|ontology_enrichment_celltype=CL:0000860!3.06e-36!45;CL:0002057!7.98e-36!42;CL:0002009!1.53e-27!65;CL:0000557!5.67e-27!71;CL:0002194!9.65e-24!63;CL:0000576!9.65e-24!63;CL:0000040!9.65e-24!63;CL:0000559!9.65e-24!63;CL:0000839!6.62e-23!70;CL:0000766!1.19e-20!76;CL:0000763!7.55e-15!112;CL:0000049!7.55e-15!112;CL:0002031!7.99e-13!124;CL:0000738!9.97e-12!140;CL:0002087!3.72e-11!119;CL:0000037!2.05e-08!172;CL:0000566!2.05e-08!172;CL:0001014!3.50e-08!2;CL:0001016!3.50e-08!2;CL:0002032!3.54e-08!165;CL:0000837!3.54e-08!165;CL:0000988!1.25e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.98e-98;33!CL:0002057;1.98e-98;33!CL:0000473;3.80e-66;39!CL:0000234;3.80e-66;39!CL:0000576;1.12e-44;48!CL:0000766;5.42e-23;69!CL:0000763;3.55e-11;100!CL:0002087;5.44e-11;104!CL:0000738;1.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-83,42;CL:0002057,2.04e-83,42;CL:0000473,1.18e-72,48;CL:0000234,1.18e-72,48;CL:0002194,1.41e-57,59;CL:0000576,1.41e-57,59;CL:0000040,1.41e-57,59;CL:0000559,1.41e-57,59;CL:0002009,1.24e-55,61;CL:0000839,2.84e-51,66;CL:0000557,1.77e-50,67;CL:0000766,7.88e-47,72;CL:0000763,2.03e-30,108;CL:0000049,2.03e-30,108;CL:0002087,2.08e-28,115;CL:0002031,4.10e-27,120;CL:0000738,1.33e-23,136;CL:0002032,1.69e-19,161;CL:0000837,1.69e-19,161;CL:0000037,1.45e-18,168;CL:0000988,1.80e-17,177;CL:0000134,3.53e-08,354;CL:0002320,5.90e-08,361;CL:0000219,3.62e-07,386;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.06e-58;42!CL:0000049;2.14e-09;108 | |||
|ontology_enrichment_disease=DOID:4468!5.59e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.01e-23!80;UBERON:0001474!3.65e-23!86;UBERON:0004765!3.75e-22!101;UBERON:0001434!3.75e-22!101;UBERON:0002390!1.88e-18!102;UBERON:0003061!1.88e-18!102;UBERON:0002193!3.10e-16!112;UBERON:0002405!2.66e-14!115;UBERON:0002204!1.03e-10!167;UBERON:0003081!2.91e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.98e-44,76;UBERON:0001474,7.55e-41,82;UBERON:0004765,5.24e-37,90;UBERON:0002405,9.81e-36,93;UBERON:0002390,8.74e-34,98;UBERON:0003061,8.74e-34,98;UBERON:0001434,4.65e-33,100;UBERON:0002193,2.03e-30,108;UBERON:0002204,1.08e-18,167;UBERON:0003081,7.47e-15,203;UBERON:0000926,1.34e-09,315;UBERON:0004120,1.34e-09,315;UBERON:0006603,1.34e-09,315;UBERON:0002384,1.19e-07,371 | |||
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| ||
|short_description=p17@PISD | |||
}} | }} |
Latest revision as of 21:08, 19 September 2015
Short description: | p17@PISD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PISD_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000439502_5end |
EntrezGene: | PISD |
HGNC: | 8999 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.04e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-83 | 42 |
defensive cell | 1.18e-72 | 48 |
phagocyte | 1.18e-72 | 48 |
monopoietic cell | 1.41e-57 | 59 |
monocyte | 1.41e-57 | 59 |
monoblast | 1.41e-57 | 59 |
promonocyte | 1.41e-57 | 59 |
macrophage dendritic cell progenitor | 1.24e-55 | 61 |
myeloid lineage restricted progenitor cell | 2.84e-51 | 66 |
granulocyte monocyte progenitor cell | 1.77e-50 | 67 |
myeloid leukocyte | 7.88e-47 | 72 |
myeloid cell | 2.03e-30 | 108 |
common myeloid progenitor | 2.03e-30 | 108 |
nongranular leukocyte | 2.08e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 4.10e-27 | 120 |
leukocyte | 1.33e-23 | 136 |
hematopoietic oligopotent progenitor cell | 1.69e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-19 | 161 |
hematopoietic stem cell | 1.45e-18 | 168 |
hematopoietic cell | 1.80e-17 | 177 |
mesenchymal cell | 3.53e-08 | 354 |
connective tissue cell | 5.90e-08 | 361 |
motile cell | 3.62e-07 | 386 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.98e-44 | 76 |
bone element | 7.55e-41 | 82 |
skeletal element | 5.24e-37 | 90 |
immune system | 9.81e-36 | 93 |
hematopoietic system | 8.74e-34 | 98 |
blood island | 8.74e-34 | 98 |
skeletal system | 4.65e-33 | 100 |
hemolymphoid system | 2.03e-30 | 108 |
musculoskeletal system | 1.08e-18 | 167 |
lateral plate mesoderm | 7.47e-15 | 203 |
mesoderm | 1.34e-09 | 315 |
mesoderm-derived structure | 1.34e-09 | 315 |
presumptive mesoderm | 1.34e-09 | 315 |
connective tissue | 1.19e-07 | 371 |