FFCP PHASE1:Hg19::chr6:30652596..30652605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-75bp_to_BC047721_5end | |association_with_transcript=-75bp_to_BC047721_5end | ||
|cluster_id=chr6:30652596..30652605,- | |||
|description=CAGE_peak_16_at_PPP1R18_5end | |description=CAGE_peak_16_at_PPP1R18_5end | ||
|id=chr6:30652596..30652605,- | |id=chr6:30652596..30652605,- | ||
|ontology_enrichment_celltype=CL:0000037!1.26e-15!172;CL:0000566!1.26e-15!172;CL:0000988!1.66e-15!182;CL:0002032!2.86e-15!165;CL:0000837!2.86e-15!165;CL:0000763!1.34e-13!112;CL:0000049!1.34e-13!112;CL:0000738!2.91e-13!140;CL:0000766!7.15e-12!76;CL:0002087!1.86e-11!119;CL:0002194!6.91e-10!63;CL:0000576!6.91e-10!63;CL:0000040!6.91e-10!63;CL:0000559!6.91e-10!63;CL:0002031!1.93e-09!124;CL:0002009!5.17e-09!65;CL:0000723!6.08e-09!436;CL:0000048!9.11e-09!430;CL:0000839!2.87e-08!70;CL:0000034!5.55e-08!444;CL:0000557!6.71e-08!71;CL:0000003!1.32e-07!722;CL:0002057!1.41e-07!42 | |ontology_enrichment_celltype=CL:0000037!1.26e-15!172;CL:0000566!1.26e-15!172;CL:0000988!1.66e-15!182;CL:0002032!2.86e-15!165;CL:0000837!2.86e-15!165;CL:0000763!1.34e-13!112;CL:0000049!1.34e-13!112;CL:0000738!2.91e-13!140;CL:0000766!7.15e-12!76;CL:0002087!1.86e-11!119;CL:0002194!6.91e-10!63;CL:0000576!6.91e-10!63;CL:0000040!6.91e-10!63;CL:0000559!6.91e-10!63;CL:0002031!1.93e-09!124;CL:0002009!5.17e-09!65;CL:0000723!6.08e-09!436;CL:0000048!9.11e-09!430;CL:0000839!2.87e-08!70;CL:0000034!5.55e-08!444;CL:0000557!6.71e-08!71;CL:0000003!1.32e-07!722;CL:0002057!1.41e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.11e-11;6!CL:0000473;5.16e-10;39!CL:0000234;5.16e-10;39!CL:0000775;1.85e-09;3!CL:0000094;5.01e-09;8!CL:0002619;4.12e-08;3!CL:0000576;4.47e-07;48!CL:0000771;5.52e-07;2 | |ontology_enrichment_celltype_v019=CL:0000235;5.11e-11;6!CL:0000473;5.16e-10;39!CL:0000234;5.16e-10;39!CL:0000775;1.85e-09;3!CL:0000094;5.01e-09;8!CL:0002619;4.12e-08;3!CL:0000576;4.47e-07;48!CL:0000771;5.52e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.58e-22,72;CL:0002194,1.04e-16,59;CL:0000576,1.04e-16,59;CL:0000040,1.04e-16,59;CL:0000559,1.04e-16,59;CL:0000763,5.69e-16,108;CL:0000049,5.69e-16,108;CL:0002009,5.71e-16,61;CL:0000839,9.53e-16,66;CL:0000557,2.02e-15,67;CL:0000738,6.81e-15,136;CL:0002032,6.07e-14,161;CL:0000837,6.07e-14,161;CL:0000037,5.97e-13,168;CL:0002031,6.33e-12,120;CL:0000988,8.51e-12,177;CL:0002087,8.86e-12,115;CL:0000235,3.93e-11,6;CL:0000473,4.70e-11,48;CL:0000234,4.70e-11,48;CL:0000775,1.64e-09,3;CL:0000094,4.63e-09,8;CL:0002619,5.97e-09,3;CL:0000771,5.47e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.42e-12!102;UBERON:0003061!4.42e-12!102;UBERON:0003081!2.11e-11!216;UBERON:0002193!3.30e-11!112;UBERON:0000178!9.86e-08!15;UBERON:0000179!9.86e-08!15;UBERON:0000463!9.86e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!4.42e-12!102;UBERON:0003061!4.42e-12!102;UBERON:0003081!2.11e-11!216;UBERON:0002193!3.30e-11!112;UBERON:0000178!9.86e-08!15;UBERON:0000179!9.86e-08!15;UBERON:0000463!9.86e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-13;15!UBERON:0000179;4.29e-13;15!UBERON:0000463;4.29e-13;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-13;15!UBERON:0000179;4.29e-13;15!UBERON:0000463;4.29e-13;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.74e-21,98;UBERON:0003061,2.74e-21,98;UBERON:0002193,1.78e-18,108;UBERON:0003081,1.31e-14,203;UBERON:0000178,3.13e-13,15;UBERON:0000179,3.13e-13,15;UBERON:0000463,3.13e-13,15;UBERON:0002371,7.10e-13,76;UBERON:0001474,1.70e-11,82;UBERON:0002405,1.96e-10,93;UBERON:0004765,5.93e-10,90;UBERON:0001434,2.18e-08,100 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0,0.458480434487708,0.0821005894499457,0.0787107813136792,0.786728553697808,0,0.928896739896456,0,1.204823675113,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0,1.79132379391939,1.94336199611388,1.80302897343931,1.59938062657521,0.377875943688809,1.4555043671269,0.929716147622738,0.411167888021826,1.23882548358041,0.863077176966451,0,0,0,0.645484683583826,0,1.69418105588344,1.36453075028923,1.12361742222542,1.53041946185451,1.60464513538047,0.639337125799041,0,0.797854630486527,0.426224750532694,1.7412554317715,0,1.24564449799115,0.502497330513487,0,0.217188844705117,0.605399502633369,1.10483290796269,0.949387162322653,0.845021145247767,0.637812899895131,1.88692780957538,0.561643155732475,0.300353785683013,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0,1.00311897234407,0.32592226663359,0.473447805734733,0,1.44833593950726,1.47302953737419,0.664601683750863,0.812411591295047,0.896639238079726,1.95089021339817,1.97325485524411,0.829050053357545,1.44901542867526,0.14828656316206,0.267540828089713,0,1.92625882585863,0,1.37450978193052,0.506039384039006,1.91139248594458,1.30216690771284,3.8018081777935,1.20460095262218,0.639933055772092,0,0.236777252044017,0.821127996921047,0.80642697289893,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.263504357079378,0.130979075497713,0,0,1.9472843619281,4.00498395788315,1.46253756570752,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0.347140501607594,0,0,0.550236083880135,0.626984899610432,0.516833518338658,0,0,0.402829317109147,1.52054421143703,0.24406205754817,1.10298924103761,0,0.357198913136319,0.673588117878509,0.675668882899933,0,0.949265659568129,0.183201743930407,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.61246251376468,0.245668634623536,0.103325781175765,0,0.741800787835671,0.910161361938026,0,0.336672227908132,0.750711119231785,0.554128230968366,0,0.919463387397059,0.300476117813194,0.226864366320042,0.358779271377724,0,0,0,0.309157587715317,0,0.18611685633159,0,0.584622030967192,0,0.0920498986422993,0,0,0.906768884048762,1.52604533079439,0.57978255948989,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.343135620597051,0.329250856225877,1.1240175325762,0.301586917234893,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0.70445216541493,0,0,0.190254152234598,0,0,4.67812311566055,2.10603838625314,1.93220510975347,0,0,0.283550194484773,0.179117045405697,0,0,0,1.23267807618516,0,0,0.25248486685276,0.063497894292169,0.381988425558278,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.897048674762886,0,0.2933531432838,0.129271715757778,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,1.50677127429638,0,0.479249710983165,0,0,0.144781306667579,0,0.358121926479791,0.448340575974109,0.394061520403854,0.862510299438069,0.898401253958239,0,0,0,0.335032530668698,0,2.99602809578873,2.99161459204025,4.55857064779639,0,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.737476674166813,0,0,0,0.413536052245775,0.215714200818617,0.853820462427555,0,0,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0.64341568457443,0,0.308419387605311,0.355123450626254,0.410635780069046,0.519254429183621,0.464841513839837,0,0.200506470303285,0.276242966807689,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.231046011313244,0,0,0.211103257785751,2.27466768141793,1.19065593693561,0.431831832204279,1.54227252690289,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,1.54561517471583,0,0.082509499920588,1.72279661398852,0,0,0.386682873168488,0.154048617114644,0,0.413509717453592,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0.10115778085555,0.929691098594572,0.62962469366128,0.6970372701606,0.924100740528266,1.06461206063404,1.73986598415015,0.9266210955196,0,0,0,0.190630193923825,0.255897791311334,0,0,1.56989728039846,0,0.54907405947211,0.117812402345686,1.2130948894399,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.409499734223957,0.141405431953713,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,0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| ||
|short_description=p16@PPP1R18 | |short_description=p16@PPP1R18 | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p16@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | -75bp_to_BC047721_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.58e-22 | 72 |
monopoietic cell | 1.04e-16 | 59 |
monocyte | 1.04e-16 | 59 |
monoblast | 1.04e-16 | 59 |
promonocyte | 1.04e-16 | 59 |
myeloid cell | 5.69e-16 | 108 |
common myeloid progenitor | 5.69e-16 | 108 |
macrophage dendritic cell progenitor | 5.71e-16 | 61 |
myeloid lineage restricted progenitor cell | 9.53e-16 | 66 |
granulocyte monocyte progenitor cell | 2.02e-15 | 67 |
leukocyte | 6.81e-15 | 136 |
hematopoietic oligopotent progenitor cell | 6.07e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.07e-14 | 161 |
hematopoietic stem cell | 5.97e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 6.33e-12 | 120 |
hematopoietic cell | 8.51e-12 | 177 |
nongranular leukocyte | 8.86e-12 | 115 |
macrophage | 3.93e-11 | 6 |
defensive cell | 4.70e-11 | 48 |
phagocyte | 4.70e-11 | 48 |
neutrophil | 1.64e-09 | 3 |
granulocyte | 4.63e-09 | 8 |
adult endothelial progenitor cell | 5.97e-09 | 3 |
eosinophil | 5.47e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.74e-21 | 98 |
blood island | 2.74e-21 | 98 |
hemolymphoid system | 1.78e-18 | 108 |
lateral plate mesoderm | 1.31e-14 | 203 |
blood | 3.13e-13 | 15 |
haemolymphatic fluid | 3.13e-13 | 15 |
organism substance | 3.13e-13 | 15 |
bone marrow | 7.10e-13 | 76 |
bone element | 1.70e-11 | 82 |
immune system | 1.96e-10 | 93 |
skeletal element | 5.93e-10 | 90 |
skeletal system | 2.18e-08 | 100 |