FFCP PHASE1:Hg19::chr1:212870613..212870630,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:212870613..212870630,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr1:212870613..212870630,- | |description=CAGE_peak_at_chr1:212870613..212870630,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!6.62e-26!6;CL:0000084!5.63e-11!25;CL:0000827!5.63e-11!25 | |ontology_enrichment_celltype=CL:0000080!6.62e-26!6;CL:0000084!5.63e-11!25;CL:0000827!5.63e-11!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.44e-12;25 | |ontology_enrichment_celltype_v019=CL:0000084;1.44e-12;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.44e-12,25;CL:0000827,1.44e-12,25;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!5.26e-18!1;DOID:0060061!5.26e-18!1;DOID:8691!5.26e-18!1;DOID:0060058!1.43e-15!10 | |ontology_enrichment_disease=DOID:0060060!5.26e-18!1;DOID:0060061!5.26e-18!1;DOID:8691!5.26e-18!1;DOID:0060058!1.43e-15!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;8.34e-34;1!DOID:0060061;8.34e-34;1!DOID:8691;8.34e-34;1!DOID:0060058;4.24e-14;10 | |ontology_enrichment_disease_v019=DOID:0060060;8.34e-34;1!DOID:0060061;8.34e-34;1!DOID:8691;8.34e-34;1!DOID:0060058;4.24e-14;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.06e-34,1;DOID:0060061,7.06e-34,1;DOID:8691,7.06e-34,1;DOID:0060058,4.24e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.25e-21!7;UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0002370!2.19e-17!4;UBERON:0005058!2.19e-17!4;UBERON:0009113!2.19e-17!4;UBERON:0003295!2.19e-17!4;UBERON:0005562!2.19e-17!4;UBERON:0002331!7.83e-16!10;UBERON:0000358!7.83e-16!10;UBERON:0000307!7.83e-16!10;UBERON:0000091!7.83e-16!10;UBERON:0000087!7.83e-16!10;UBERON:0007806!7.83e-16!10;UBERON:0008780!7.83e-16!10;UBERON:0005728!7.83e-16!10;UBERON:0001042!2.46e-15!10;UBERON:0009145!2.46e-15!10;UBERON:0006562!5.29e-14!11;UBERON:0003351!6.34e-12!6;UBERON:0000178!9.14e-11!15;UBERON:0000179!9.14e-11!15;UBERON:0000463!9.14e-11!15;UBERON:0002193!8.64e-09!112;UBERON:0001557!2.31e-08!19;UBERON:0000974!1.62e-07!10;UBERON:0003408!1.62e-07!10;UBERON:0002390!1.76e-07!102;UBERON:0003061!1.76e-07!102;UBERON:0000478!6.22e-07!24;UBERON:0009722!6.54e-07!11;UBERON:0007690!6.54e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!1.25e-21!7;UBERON:0002372!1.70e-17!1;UBERON:0001961!1.70e-17!1;UBERON:0001744!1.70e-17!1;UBERON:0001735!1.70e-17!1;UBERON:0002370!2.19e-17!4;UBERON:0005058!2.19e-17!4;UBERON:0009113!2.19e-17!4;UBERON:0003295!2.19e-17!4;UBERON:0005562!2.19e-17!4;UBERON:0002331!7.83e-16!10;UBERON:0000358!7.83e-16!10;UBERON:0000307!7.83e-16!10;UBERON:0000091!7.83e-16!10;UBERON:0000087!7.83e-16!10;UBERON:0007806!7.83e-16!10;UBERON:0008780!7.83e-16!10;UBERON:0005728!7.83e-16!10;UBERON:0001042!2.46e-15!10;UBERON:0009145!2.46e-15!10;UBERON:0006562!5.29e-14!11;UBERON:0003351!6.34e-12!6;UBERON:0000178!9.14e-11!15;UBERON:0000179!9.14e-11!15;UBERON:0000463!9.14e-11!15;UBERON:0002193!8.64e-09!112;UBERON:0001557!2.31e-08!19;UBERON:0000974!1.62e-07!10;UBERON:0003408!1.62e-07!10;UBERON:0002390!1.76e-07!102;UBERON:0003061!1.76e-07!102;UBERON:0000478!6.22e-07!24;UBERON:0009722!6.54e-07!11;UBERON:0007690!6.54e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-30;10!UBERON:0000178;1.20e-20;15!UBERON:0000179;1.20e-20;15!UBERON:0000463;1.20e-20;15!UBERON:0000478;3.20e-13;24!UBERON:0002390;3.39e-10;32!UBERON:0000922;9.31e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0002331;1.68e-30;10!UBERON:0000178;1.20e-20;15!UBERON:0000179;1.20e-20;15!UBERON:0000463;1.20e-20;15!UBERON:0000478;3.20e-13;24!UBERON:0002390;3.39e-10;32!UBERON:0000922;9.31e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.68e-30,10;UBERON:0000358,1.68e-30,10;UBERON:0000307,1.68e-30,10;UBERON:0000091,1.68e-30,10;UBERON:0000087,1.68e-30,10;UBERON:0007010,1.68e-30,10;UBERON:0007806,1.68e-30,10;UBERON:0008780,1.68e-30,10;UBERON:0005728,1.68e-30,10;UBERON:0000178,1.20e-20,15;UBERON:0000179,1.20e-20,15;UBERON:0000463,1.20e-20,15;UBERON:0000478,3.20e-13,24 | |||
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|short_description=p@chr1:212870613..212870630,- | |short_description=p@chr1:212870613..212870630,- | ||
}} | }} |
Latest revision as of 03:41, 28 July 2015
Short description: | p@chr1:212870613..212870630, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:212870613..212870630, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.44e-12 | 25 |
pro-T cell | 1.44e-12 | 25 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.68e-30 | 10 |
blastocyst | 1.68e-30 | 10 |
blastula | 1.68e-30 | 10 |
bilaminar disc | 1.68e-30 | 10 |
inner cell mass | 1.68e-30 | 10 |
cleaving embryo | 1.68e-30 | 10 |
connecting stalk | 1.68e-30 | 10 |
inner cell mass derived epiblast | 1.68e-30 | 10 |
extraembryonic mesoderm | 1.68e-30 | 10 |
blood | 1.20e-20 | 15 |
haemolymphatic fluid | 1.20e-20 | 15 |
organism substance | 1.20e-20 | 15 |
extraembryonic structure | 3.20e-13 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.06e-34 | 1 |
cutaneous T cell lymphoma | 7.06e-34 | 1 |
mycosis fungoides | 7.06e-34 | 1 |
lymphoma | 4.24e-14 | 10 |