FFCP PHASE1:Hg19::chr17:7122146..7122156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7122146..7122156,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_at_chr17:7122146..7122156,- | |description=CAGE_peak_at_chr17:7122146..7122156,- | ||
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|ontology_enrichment_celltype=CL:0000306!9.11e-07!4;CL:0002222!9.11e-07!4;CL:0002224!9.11e-07!4 | |ontology_enrichment_celltype=CL:0000306!9.11e-07!4;CL:0002222!9.11e-07!4;CL:0002224!9.11e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.39e-53;3 | |ontology_enrichment_development_v019=UBERON:0003056;6.39e-53;3 | ||
|ontology_enrichment_disease=DOID:5409!8.61e-07!4 | |ontology_enrichment_disease=DOID:5409!8.61e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-79,2;UBERON:0002757,1.56e-79,2;UBERON:0010134,1.56e-79,2;UBERON:0005408,1.56e-79,2;UBERON:0001899,1.56e-79,2;UBERON:0003296,1.81e-40,4;UBERON:0010133,1.81e-40,4;UBERON:0002784,1.81e-40,4;UBERON:0000966,4.06e-27,6;UBERON:0005388,4.06e-27,6;UBERON:0001802,4.06e-27,6;UBERON:0001894,1.14e-23,7;UBERON:0006222,1.14e-23,7;UBERON:0000970,1.04e-17,21;UBERON:0002104,1.04e-17,21;UBERON:0000020,1.31e-15,24;UBERON:0001032,1.31e-15,24;UBERON:0004456,1.31e-15,24;UBERON:0003056,6.84e-11,61;UBERON:0000019,6.69e-09,20;UBERON:0000047,6.69e-09,20;UBERON:0010312,6.69e-09,20;UBERON:0004088,6.69e-09,20;UBERON:0010230,6.69e-09,20;UBERON:0003072,6.69e-09,20;UBERON:0004128,6.69e-09,20;UBERON:0003071,6.69e-09,20;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0001456,3.51e-08,22;UBERON:0002346,6.09e-08,86 | |||
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|short_description=p@chr17:7122146..7122156,- | |short_description=p@chr17:7122146..7122156,- | ||
}} | }} |
Latest revision as of 20:38, 25 July 2015
Short description: | p@chr17:7122146..7122156, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7122146..7122156, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-79 | 2 |
regional part of epithalamus | 1.56e-79 | 2 |
secretory circumventricular organ | 1.56e-79 | 2 |
circumventricular organ | 1.56e-79 | 2 |
epithalamus | 1.56e-79 | 2 |
gland of diencephalon | 1.81e-40 | 4 |
neuroendocrine gland | 1.81e-40 | 4 |
regional part of diencephalon | 1.81e-40 | 4 |
retina | 4.06e-27 | 6 |
photoreceptor array | 4.06e-27 | 6 |
posterior segment of eyeball | 4.06e-27 | 6 |
diencephalon | 1.14e-23 | 7 |
future diencephalon | 1.14e-23 | 7 |
eye | 1.04e-17 | 21 |
visual system | 1.04e-17 | 21 |
sense organ | 1.31e-15 | 24 |
sensory system | 1.31e-15 | 24 |
entire sense organ system | 1.31e-15 | 24 |
pre-chordal neural plate | 6.84e-11 | 61 |
camera-type eye | 6.69e-09 | 20 |
simple eye | 6.69e-09 | 20 |
immature eye | 6.69e-09 | 20 |
ocular region | 6.69e-09 | 20 |
eyeball of camera-type eye | 6.69e-09 | 20 |
optic cup | 6.69e-09 | 20 |
optic vesicle | 6.69e-09 | 20 |
eye primordium | 6.69e-09 | 20 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
face | 3.51e-08 | 22 |
neurectoderm | 6.09e-08 | 86 |