FFCP PHASE1:Hg19::chr5:135385116..135385139,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010jed.2_5end | |association_with_transcript=0bp_to_uc010jed.2_5end | ||
|cluster_id=chr5:135385116..135385139,+ | |||
|coexpression_cluster_id=C295 | |coexpression_cluster_id=C295 | ||
|description=CAGE_peak_9_at_TGFBI_5end | |description=CAGE_peak_9_at_TGFBI_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.70e-28!180;CL:0002371!1.26e-22!591;CL:0000144!5.27e-20!625;CL:0000680!5.03e-18!57;CL:0000056!5.03e-18!57;CL:0000355!5.03e-18!57;CL:0000548!6.70e-18!679;CL:0000004!6.70e-18!679;CL:0000255!6.70e-18!679;CL:0000012!3.23e-17!682;CL:0000187!3.32e-16!54;CL:0000183!3.40e-15!59;CL:0000057!9.19e-15!75;CL:0000048!1.03e-14!430;CL:0000723!2.56e-14!436;CL:0000192!4.94e-14!42;CL:0000514!4.94e-14!42;CL:0000359!2.99e-13!32;CL:0000393!6.25e-13!60;CL:0000211!6.25e-13!60;CL:0000034!1.13e-12!444;CL:0000003!8.98e-11!722;CL:0002334!1.83e-08!12;CL:0002620!1.54e-07!23;CL:0000222!5.62e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.70e-28!180;CL:0002371!1.26e-22!591;CL:0000144!5.27e-20!625;CL:0000680!5.03e-18!57;CL:0000056!5.03e-18!57;CL:0000355!5.03e-18!57;CL:0000548!6.70e-18!679;CL:0000004!6.70e-18!679;CL:0000255!6.70e-18!679;CL:0000012!3.23e-17!682;CL:0000187!3.32e-16!54;CL:0000183!3.40e-15!59;CL:0000057!9.19e-15!75;CL:0000048!1.03e-14!430;CL:0000723!2.56e-14!436;CL:0000192!4.94e-14!42;CL:0000514!4.94e-14!42;CL:0000359!2.99e-13!32;CL:0000393!6.25e-13!60;CL:0000211!6.25e-13!60;CL:0000034!1.13e-12!444;CL:0000003!8.98e-11!722;CL:0002334!1.83e-08!12;CL:0002620!1.54e-07!23;CL:0000222!5.62e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.63e-13;32!CL:0002334;1.20e-11;12!CL:0002620;6.65e-10;23!CL:0000192;1.11e-09;43!CL:0000187;1.54e-09;55!CL:0000393;1.38e-07;61!CL:0000211;1.38e-07;61!CL:0000057;1.88e-07;73 | |ontology_enrichment_celltype_v019=CL:0000359;4.63e-13;32!CL:0002334;1.20e-11;12!CL:0002620;6.65e-10;23!CL:0000192;1.11e-09;43!CL:0000187;1.54e-09;55!CL:0000393;1.38e-07;61!CL:0000211;1.38e-07;61!CL:0000057;1.88e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.90e-22,427;CL:0000723,9.65e-22,433;CL:0000034,2.07e-20,441;CL:0000680,8.02e-20,58;CL:0000056,8.02e-20,58;CL:0000355,8.02e-20,58;CL:0000057,1.73e-19,76;CL:0000187,2.05e-17,55;CL:0000393,2.40e-14,61;CL:0000211,2.40e-14,61;CL:0000359,3.03e-14,32;CL:0000192,1.35e-13,43;CL:0000514,1.35e-13,43;CL:0002334,1.70e-11,12;CL:0002320,8.78e-10,361;CL:0002620,8.94e-10,23;CL:0000134,1.97e-09,354;CL:0000219,4.07e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000355;4.23e-10;58!CL:0000514;1.11e-09;43 | |ontology_enrichment_development_v019=CL:0000355;4.23e-10;58!CL:0000514;1.11e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;6.05e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;6.05e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.44e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.82e-16!61;UBERON:0002036!1.82e-16!61;UBERON:0003082!1.82e-16!61;UBERON:0000486!2.68e-16!82;UBERON:0002385!1.24e-15!63;UBERON:0001015!1.24e-15!63;UBERON:0000383!1.24e-15!63;UBERON:0004290!2.87e-15!70;UBERON:0000914!4.69e-15!83;UBERON:0002329!4.69e-15!83;UBERON:0003077!4.69e-15!83;UBERON:0003059!4.69e-15!83;UBERON:0007282!4.69e-15!83;UBERON:0009618!4.69e-15!83;UBERON:0007285!4.69e-15!83;UBERON:0002204!7.77e-15!167;UBERON:0005256!1.52e-11!143;UBERON:0000468!3.80e-11!659;UBERON:0000926!2.51e-10!448;UBERON:0004120!2.51e-10!448;UBERON:0006603!2.51e-10!448;UBERON:0000490!1.09e-09!138;UBERON:0000467!1.12e-09!625;UBERON:0001637!1.59e-09!42;UBERON:0003509!1.59e-09!42;UBERON:0004572!1.59e-09!42;UBERON:0000480!1.66e-09!626;UBERON:0002100!8.81e-09!216;UBERON:0004573!1.38e-08!33;UBERON:0004571!1.38e-08!33;UBERON:0002049!4.68e-08!79;UBERON:0007798!4.68e-08!79;UBERON:0004872!5.42e-08!84;UBERON:0003081!5.63e-08!216;UBERON:0004535!1.33e-07!110;UBERON:0000475!3.77e-07!365;UBERON:0000479!3.78e-07!787;UBERON:0001009!4.00e-07!113 | |ontology_enrichment_uberon=UBERON:0001134!1.82e-16!61;UBERON:0002036!1.82e-16!61;UBERON:0003082!1.82e-16!61;UBERON:0000486!2.68e-16!82;UBERON:0002385!1.24e-15!63;UBERON:0001015!1.24e-15!63;UBERON:0000383!1.24e-15!63;UBERON:0004290!2.87e-15!70;UBERON:0000914!4.69e-15!83;UBERON:0002329!4.69e-15!83;UBERON:0003077!4.69e-15!83;UBERON:0003059!4.69e-15!83;UBERON:0007282!4.69e-15!83;UBERON:0009618!4.69e-15!83;UBERON:0007285!4.69e-15!83;UBERON:0002204!7.77e-15!167;UBERON:0005256!1.52e-11!143;UBERON:0000468!3.80e-11!659;UBERON:0000926!2.51e-10!448;UBERON:0004120!2.51e-10!448;UBERON:0006603!2.51e-10!448;UBERON:0000490!1.09e-09!138;UBERON:0000467!1.12e-09!625;UBERON:0001637!1.59e-09!42;UBERON:0003509!1.59e-09!42;UBERON:0004572!1.59e-09!42;UBERON:0000480!1.66e-09!626;UBERON:0002100!8.81e-09!216;UBERON:0004573!1.38e-08!33;UBERON:0004571!1.38e-08!33;UBERON:0002049!4.68e-08!79;UBERON:0007798!4.68e-08!79;UBERON:0004872!5.42e-08!84;UBERON:0003081!5.63e-08!216;UBERON:0004535!1.33e-07!110;UBERON:0000475!3.77e-07!365;UBERON:0000479!3.78e-07!787;UBERON:0001009!4.00e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.36e-09;31!UBERON:0001015;1.36e-09;31!UBERON:0000383;1.36e-09;31!UBERON:0004573;2.72e-09;33!UBERON:0004571;2.72e-09;33!UBERON:0001637;1.58e-08;42!UBERON:0003509;1.58e-08;42!UBERON:0004572;1.58e-08;42!UBERON:0004457;4.23e-07;9!UBERON:0000042;4.23e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002385;1.36e-09;31!UBERON:0001015;1.36e-09;31!UBERON:0000383;1.36e-09;31!UBERON:0004573;2.72e-09;33!UBERON:0004571;2.72e-09;33!UBERON:0001637;1.58e-08;42!UBERON:0003509;1.58e-08;42!UBERON:0004572;1.58e-08;42!UBERON:0004457;4.23e-07;9!UBERON:0000042;4.23e-07;9 | ||
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|phase1_expression=7.44881355009282,10.4909256706582,8.03440103347036,2.00146596706261,4.02264984984559,0.872338524100369,0,2.52687949370732,0,2.45733936501509,2.09340350391728,11.1405099786388,2.90143676051299,0.866364470720326,0.662794751455832,7.39557661096953,4.82155622419182,5.11217063271161,3.41552959153355,8.49535300729837,3.06001036866379,4.38836610069323,0.286235987131057,0.684372125364421,0.753255837568817,0.0764134057479513,0,0,0.786728553697808,0.383829398097213,0.928896739896456,0,0.90361775633475,0.739508020333575,0,0,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0,0,1.59938062657521,1.13362783106643,1.21292030593908,0.929716147622738,1.23350366406548,2.16794459626573,0.863077176966451,1.0246428261164,1.41889337933151,0.344745680736619,0,0,1.50593871634084,0.818718450173537,1.79778787556068,2.44867113896722,1.28371610830437,0.639337125799041,0.989553900560148,1.59570926097305,2.55734850319616,0.290209238628584,0,0.622822248995575,1.7587406567972,0,2.6062661364614,0.605399502633369,0,0.949387162322653,1.47878700418359,0.850417199860174,0.419317291016752,0.898629049171961,0.450530678524519,0.803627933485401,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.53435074212236,5.42158728576849,7.52006865953834,18.105814870103,3.9764297352555,22.3852040339212,3.40325341790644,6.65188192387692,5.44575671297381,0.0654895377488563,0.728590576585084,0.370784442784429,1.62273696827342,3.83085422058388,4.52057065764142,0.715471872916026,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,2.61656431285521,3.97577561356255,3.79891534993739,2.38336525463794,7.74458876021797,2.4826786753885,3.92474320099615,9.60740961567345,15.0467204534468,0.311211035399766,0.269421344139376,0.163461903113459,1.51357427644931,2.88087962239999,0,1.24864030732128,0,1.34503812496621,0.23486899728753,0.161872944368132,0,0.408308342509787,0.245668634623536,0.619954687054593,0,1.7308685049499,3.64064544775211,4.31170885089743,0.168336113954066,0,0,0,1.83892677479412,3.45547535485173,1.81491493056034,6.27863724911017,8.75585294156127,5.72216133130817,15.3046459003045,5.77094163735258,7.72921620136887,7.07244054060041,18.9029492110218,14.8104247845022,8.33031455005578,5.79914361446486,3.39456719319505,26.6257194387461,12.0902517873168,2.03472710772585,2.70565194428616,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,1.40241773803446,3.2925920906512,1.47008711385542,0,0,0,0,0.122988438543114,3.77449182656756,1.42675371031213,0,0.100528972411631,0.185176890317059,0.325808305310325,0,2.88662684050547,0.695582429850461,1.52631302506568,0.577465791044295,0.462985512576611,0.190254152234598,0,0,0.984868024349589,1.17002132569619,1.33768046059855,0.93733833986777,7.39121364074982,1.27597587518148,0.0895585227028483,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0.102827492703324,0.600686115687835,0,0.560655421726804,0.43596006883328,0.36669142910475,2.84397774667111,0,4.22651376278,1.06375246633948,0,0.771622122786426,0,0.532844358032199,6.86294369559108,5.42621605391443,0.823240336780769,3.58309802723109,6.04166312862328,7.12756685640086,0.602878754119172,0,0.899756920638513,2.43247561282381,1.00451418286425,2.10833939483032,2.63587341040741,4.59447743336456,0,4.92256442669769,9.24643451476725,15.2201818753911,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,3.18997878469764,6.5022167737758,0.271265023699736,3.95144636908534,3.56857977594324,0.630809660135739,1.17141414992713,0.300946099727719,4.5481500811197,3.10419213877515,6.64225598535437,4.42486004500088,0.695068915744663,0.979005787313703,1.02943027143257,0.206768026122887,1.07857100409308,0.640365346820666,0.606255142892519,3.32870879020994,9.97887967987945,16.6232231238581,13.5046536493495,19.9268667047482,17.6832025972867,3.58195074346692,14.4768529029247,8.90508398669946,5.39733928309294,4.97172830876756,2.05317890034523,6.75030757938707,1.04589340613963,0.120859449591622,4.41114234667227,0,3.21480454860899,1.45672934405374,6.03172308813351,0,1.30926073077505,0,0,1.58327443339314,0,0,0.431831832204279,0,0.541892875087706,0,0.254876273045038,0,0.895499018888713,0,0,0,0.328014645699706,0.976135183992909,0.412164046590889,0,0,1.14853107599234,0.650060246036521,8.03419649220798,2.32009723901093,2.61882649094895,2.30255512089194,1.37836572484531,7.41199689591088,1.45016693914229,2.38634556765083,4.27353771104339,2.14870389969272,1.92190067365106,0.765676274967505,0.809262246844399,0.464845549297286,9.4443704049192,1.3940745403212,1.84820148105653,3.72614221221915,1.73986598415015,10.1928320507156,1.71749864090389,0.744316738719335,1.2655176988749,0.571890581771475,0,0,3.18203247925937,0.78494864019923,2.518214406166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| ||
|short_description=p9@TGFBI | |short_description=p9@TGFBI | ||
}} | }} |
Latest revision as of 19:33, 24 September 2015
Short description: | p9@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 0bp_to_uc010jed.2_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.90e-22 | 427 |
somatic stem cell | 9.65e-22 | 433 |
stem cell | 2.07e-20 | 441 |
muscle precursor cell | 8.02e-20 | 58 |
myoblast | 8.02e-20 | 58 |
multi-potent skeletal muscle stem cell | 8.02e-20 | 58 |
fibroblast | 1.73e-19 | 76 |
muscle cell | 2.05e-17 | 55 |
electrically responsive cell | 2.40e-14 | 61 |
electrically active cell | 2.40e-14 | 61 |
vascular associated smooth muscle cell | 3.03e-14 | 32 |
smooth muscle cell | 1.35e-13 | 43 |
smooth muscle myoblast | 1.35e-13 | 43 |
preadipocyte | 1.70e-11 | 12 |
connective tissue cell | 8.78e-10 | 361 |
skin fibroblast | 8.94e-10 | 23 |
mesenchymal cell | 1.97e-09 | 354 |
motile cell | 4.07e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.44e-07 | 14 |