FFCP PHASE1:Hg19::chr2:120687358..120687379,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:120687358..120687379,+
|short_description=p6@PTPN4
|description=CAGE_peak_6_at_PTPN4_5end
|association_with_transcript=6bp_to_ENST00000544261,uc010yyr.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5775 | |EntrezGene=5775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9656 | |HGNC=9656 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1A0 | |UniProt=F5H1A0 | ||
|association_with_transcript=6bp_to_ENST00000544261,uc010yyr.1_5end | |||
|cluster_id=chr2:120687358..120687379,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_PTPN4_5end | |||
|id=chr2:120687358..120687379,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.23e-25!18;CL:0000789!3.23e-25!18;CL:0002420!3.23e-25!18;CL:0002419!3.23e-25!18;CL:0000790!3.23e-25!18;CL:0000084!3.08e-18!25;CL:0000827!3.08e-18!25;CL:0000738!4.66e-18!140;CL:0000625!1.23e-16!11;CL:0000037!3.83e-16!172;CL:0000566!3.83e-16!172;CL:0002087!6.56e-15!119;CL:0000988!3.33e-14!182;CL:0002032!1.02e-13!165;CL:0000837!1.02e-13!165;CL:0002031!1.65e-12!124;CL:0000838!4.43e-11!52;CL:0000542!1.01e-10!53;CL:0000051!1.01e-10!53;CL:0000624!6.16e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.07e-50;18!CL:0000789;2.07e-50;18!CL:0002419;2.07e-50;18!CL:0000084;7.39e-35;25!CL:0000625;1.28e-32;11!CL:0000624;9.54e-17;6!CL:0000542;2.54e-10;53!CL:0000623;5.12e-10;3!CL:0000898;9.96e-10;3!CL:0000767;3.69e-09;3!CL:0000226;4.32e-09;3!CL:0000842;4.32e-09;3!CL:0000094;2.29e-08;8!CL:0000815;5.96e-07;2!CL:0000792;5.96e-07;2!CL:0002677;5.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.13e-50,18;CL:0000789,2.13e-50,18;CL:0002420,2.13e-50,18;CL:0002419,2.13e-50,18;CL:0000790,2.13e-50,18;CL:0000084,7.55e-35,25;CL:0000827,7.55e-35,25;CL:0000625,1.30e-32,11;CL:0000838,3.39e-20,52;CL:0000542,1.05e-19,53;CL:0000051,1.05e-19,53;CL:0000624,9.96e-17,6;CL:0000738,1.50e-15,136;CL:0002087,1.38e-13,115;CL:0000037,7.57e-12,168;CL:0000988,8.20e-11,177;CL:0000623,4.83e-10,3;CL:0000825,4.83e-10,3;CL:0002032,5.47e-10,161;CL:0000837,5.47e-10,161;CL:0000898,9.53e-10,3;CL:0002031,1.18e-09,120;CL:0000767,3.80e-09,3;CL:0000226,4.26e-09,3;CL:0000842,4.26e-09,3;CL:0000094,2.16e-08,8;CL:0000893,4.70e-07,2;CL:0002489,4.70e-07,2;CL:0000809,4.70e-07,2;CL:0000808,4.70e-07,2;CL:0000894,4.70e-07,2;CL:0000806,4.70e-07,2;CL:0000807,4.70e-07,2;CL:0000805,4.70e-07,2;CL:0002425,4.70e-07,2;CL:0000815,5.78e-07,2;CL:0000792,5.78e-07,2;CL:0002677,5.78e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.07e-50;18!CL:0000051;2.54e-10;53!CL:0002425;4.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-20!115;UBERON:0000178!2.51e-12!15;UBERON:0000179!2.51e-12!15;UBERON:0000463!2.51e-12!15;UBERON:0002390!4.48e-11!102;UBERON:0003061!4.48e-11!102;UBERON:0002193!2.15e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.21e-25;15!UBERON:0000179;4.21e-25;15!UBERON:0000463;4.21e-25;15!UBERON:0002390;1.68e-11;32!UBERON:0002193;9.74e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.45e-25,15;UBERON:0000179,4.45e-25,15;UBERON:0000463,4.45e-25,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,27.2518872649021,5.41856431606266,0,0,0,0,0,0,9.97191735357379,5.61524452916397,4.55722828503289,0.447830948479849,2.59114932815184,0.515151135268373,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,4.48406850385229,0,3.73748563216283,5.10913991573914,4.11202997999018,39.6231994075907,15.6442687984123,13.2565385605725,1.94826728407911,42.6702049870215,22.0954430606128,17.5011776721061,25.1847593301464,16.1395062854351,18.0782493108231,28.6121954010396,36.2018523299461,43.1806597745228,5.04174314751005,4.28065324943541,4.18142095219907,55.9748152925977,26.4422140585326,21.6485290654057,40.230131031101,38.2278497188916,45.5758417699493,38.018081777935,36.439178816821,57.4659884083339,26.2354525759926,50.4335546853756,39.4141438522102,28.0233373082378,19.523134292196,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.327447688744282,0,0,0,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.364431023055,40.588336601597,25.8753089831421,21.6899731312775,0,0,0,0,0,0,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0263856457419,5.60856922128404,10.566028222541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,16.2383234954294,15.2927441428475,11.3929437434833,19.5350055875387,15.2204041041892,10.3755729790835,21.0612260522865,14.2762531732969,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,0,0,2.52717460302113,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.591860433821602,9.57932369387759,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.129282956361551,0,0,0,1.38823636338003,0.628817220398664,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.709618961301111,0.115233987555779,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,2.2380505851304,0.874238242015829,0,0.245148321753905,0,0.392616934229891,0,0,0,3.75935671919414,0.902410431630081,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.516711278688049,0.31037357147929,0,0.12729431655633,0.202117188958219,0.435433495793923,0,0.26940821205835,0.645499848534087,0,0,0,0,0,0,0.366724332548599,0,0,1.40891655513718,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,27.2518872649021,5.41856431606266,0,0,0,0,0,0,9.97191735357379,5.61524452916397,4.55722828503289,0.447830948479849,2.59114932815184,0.515151135268373,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,4.48406850385229,0,3.73748563216283,5.10913991573914,4.11202997999018,39.6231994075907,15.6442687984123,13.2565385605725,1.94826728407911,42.6702049870215,22.0954430606128,17.5011776721061,25.1847593301464,16.1395062854351,18.0782493108231,28.6121954010396,36.2018523299461,43.1806597745228,5.04174314751005,4.28065324943541,4.18142095219907,55.9748152925977,26.4422140585326,21.6485290654057,40.230131031101,38.2278497188916,45.5758417699493,38.018081777935,36.439178816821,57.4659884083339,26.2354525759926,50.4335546853756,39.4141438522102,28.0233373082378,19.523134292196,10.7170058873271,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.327447688744282,0,0,0,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.364431023055,40.588336601597,25.8753089831421,21.6899731312775,0,0,0,0,0,0,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0263856457419,5.60856922128404,10.566028222541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,16.2383234954294,15.2927441428475,11.3929437434833,19.5350055875387,15.2204041041892,10.3755729790835,21.0612260522865,14.2762531732969,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,0,0,2.52717460302113,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.0898683511473268,0,0,0.591860433821602,9.57932369387759,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.129282956361551,0,0,0,1.38823636338003,0.628817220398664,1.24271716604159,1.9846640872478,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.999936979274649,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0.709618961301111,0.115233987555779,0,0.0679697329768317,0,0,0,0.627944742804112,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,2.2380505851304,0.874238242015829,0,0.245148321753905,0,0.392616934229891,0,0,0,3.75935671919414,0.902410431630081,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.516711278688049,0.31037357147929,0,0.12729431655633,0.202117188958219,0.435433495793923,0,0.26940821205835,0.645499848534087,0,0,0,0,0,0,0.366724332548599,0,0,1.40891655513718,0 | ||
|short_description=p6@PTPN4 | |||
}} | }} |
Latest revision as of 17:18, 16 September 2015
Short description: | p6@PTPN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PTPN4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 6bp_to_ENST00000544261, uc010yyr.1_5end |
EntrezGene: | PTPN4 |
HGNC: | 9656 |
UniProt: | F5H1A0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.45e-25 | 15 |
haemolymphatic fluid | 4.45e-25 | 15 |
organism substance | 4.45e-25 | 15 |