FFCP PHASE1:Hg19::chr2:158114199..158114286,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:158114199..158114286,+
|short_description=p1@GALNT5
|description=CAGE_peak_1_at_GALNT5_5end
|association_with_transcript=-53bp_to_NM_014568,uc002tzg.2,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11227 | |EntrezGene=11227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |HGNC=4127 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKZ1,Q7Z7M9 | |UniProt=A5PKZ1,Q7Z7M9 | ||
|association_with_transcript=-53bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|cluster_id=chr2:158114199..158114286,+ | |||
|coexpression_cluster_id=C1496 | |||
|description=CAGE_peak_1_at_GALNT5_5end | |||
|id=chr2:158114199..158114286,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-30!180;CL:0000057!3.03e-18!75;CL:0000680!5.87e-15!57;CL:0000056!5.87e-15!57;CL:0000355!5.87e-15!57;CL:0000187!1.58e-13!54;CL:0000192!3.27e-13!42;CL:0000514!3.27e-13!42;CL:0000359!1.17e-11!32;CL:0000393!1.86e-11!60;CL:0000211!1.86e-11!60;CL:0002620!2.41e-11!23;CL:0000183!2.78e-11!59;CL:0002371!3.84e-09!591;CL:0000144!5.09e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.24e-12;32!CL:0000192;4.35e-11;43!CL:0002620;7.68e-11;23!CL:0000187;2.90e-08;55!CL:0000057;4.72e-07;73!CL:0002334;8.68e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-18,76;CL:0000680,1.62e-16,58;CL:0000056,1.62e-16,58;CL:0000355,1.62e-16,58;CL:0000187,6.70e-15,55;CL:0000192,9.26e-15,43;CL:0000514,9.26e-15,43;CL:0000359,3.17e-13,32;CL:0000393,8.30e-12,61;CL:0000211,8.30e-12,61;CL:0002620,7.88e-11,23;CL:0000048,6.64e-08,427;CL:0000723,7.61e-08,433;CL:0000034,6.50e-07,441;CL:0002334,7.32e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.35e-11;43!CL:0000355;1.37e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.48e-19!83;UBERON:0002329!1.48e-19!83;UBERON:0003077!1.48e-19!83;UBERON:0003059!1.48e-19!83;UBERON:0007282!1.48e-19!83;UBERON:0009618!1.48e-19!83;UBERON:0007285!1.48e-19!83;UBERON:0000486!8.82e-17!82;UBERON:0003102!3.85e-16!95;UBERON:0004290!1.18e-14!70;UBERON:0000475!2.88e-14!365;UBERON:0001134!7.27e-14!61;UBERON:0002036!7.27e-14!61;UBERON:0003082!7.27e-14!61;UBERON:0002385!9.70e-14!63;UBERON:0001015!9.70e-14!63;UBERON:0000383!9.70e-14!63;UBERON:0005256!6.18e-11!143;UBERON:0002100!2.84e-10!216;UBERON:0000481!6.06e-10!347;UBERON:0002199!7.95e-10!45;UBERON:0002416!7.95e-10!45;UBERON:0003104!3.88e-09!238;UBERON:0009142!3.88e-09!238;UBERON:0002097!6.34e-09!40;UBERON:0000165!2.43e-07!28;UBERON:0000930!2.43e-07!28;UBERON:0004573!3.85e-07!33;UBERON:0004571!3.85e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;4.18e-09;16!UBERON:0000165;1.31e-08;28!UBERON:0002204;3.63e-08;70!UBERON:0002385;6.86e-08;31!UBERON:0001015;6.86e-08;31!UBERON:0000383;6.86e-08;31!UBERON:0004573;1.43e-07;33!UBERON:0004571;1.43e-07;33!UBERON:0002097;5.88e-07;41!UBERON:0002199;6.30e-07;46!UBERON:0002416;6.30e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,9.15e-18,83;UBERON:0003102,1.35e-17,99;UBERON:0002329,1.21e-15,71;UBERON:0003059,1.21e-15,71;UBERON:0007282,1.21e-15,71;UBERON:0004290,1.21e-15,71;UBERON:0009618,1.21e-15,71;UBERON:0007524,1.38e-15,73;UBERON:0001134,1.58e-15,62;UBERON:0002036,1.58e-15,62;UBERON:0003082,1.58e-15,62;UBERON:0003077,3.80e-15,72;UBERON:0007285,3.80e-15,72;UBERON:0002385,5.40e-15,64;UBERON:0001015,5.40e-15,64;UBERON:0000383,5.40e-15,64;UBERON:0007503,5.93e-13,78;UBERON:0002199,1.16e-09,46;UBERON:0002416,1.16e-09,46;UBERON:0000075,4.01e-09,16;UBERON:0002097,4.19e-09,41;UBERON:0000165,4.58e-09,29;UBERON:0000930,4.58e-09,29;UBERON:0004573,1.50e-08,33;UBERON:0004571,1.50e-08,33;UBERON:0001637,2.50e-08,42;UBERON:0003509,2.50e-08,42;UBERON:0004572,2.50e-08,42;UBERON:0005256,1.09e-07,122;UBERON:0011137,1.17e-07,14;UBERON:0000033,5.38e-07,56 | |||
|phase1_expression=10.9007027562334,9.63452357509424,5.07435854745496,10.007329835313,0.446961094427288,4.36169262050184,2.53299878168311,3.79031924056099,0.783556884599516,0.491467873003018,0,0.218441372130172,0.263766978228454,50.8679710665792,29.4943664397845,5.3786011716142,4.21886169616784,5.84248072309899,8.78279037822912,0.738726348460727,0.816002764977012,0.313454721478088,11.4494394852423,6.70684682857133,2.13422487311165,0,0,0,0,0,0,9.19421224478927,8.433765725791,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,27.8308147336116,20.0535164254356,24.9136012612617,13.5198610998687,26.2782829963423,2.45790524626576,2.88248216701333,3.60122621341817,1.76821751921912,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,5.23312862571041,34.291064666977,11.3967460498122,128.436905388822,17.7838704864265,6.02936249737207,10.0921968025615,3.20246987189115,11.1000396787722,2.8008993185979,0.538842688278752,0.163461903113459,1.96764655938411,3.45705554687999,0.468642863667593,4.99456122928513,1.71141546463335,4.03511437489863,1.17434498643765,0.485618833104395,0.561803226808994,31.6438965445085,7.73856199064138,15.9121703010679,43.956105719436,21.5122228472344,0,0,6.56510844420858,3.503318556415,24.1045780471239,24.5827467693269,31.568242967299,33.2026110183579,3.62982986112067,42.874122929638,44.2063794854435,38.1477422087211,106.532339109963,95.8388521917482,58.9996836704491,56.7656411811349,125.569591187502,48.0364435444709,33.8261257487113,54.6776397935258,31.3593350228495,139.163760266513,49.2677760333161,10.5127567232502,15.654129106227,21.0014512854943,15.4874481510062,0,0,0.232387885739037,0.829288440122964,0.252320850875628,0,29.725411142665,18.6539872075937,0,45.043689019102,47.6440457901926,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.737930631258681,6.51957679134397,7.68251997860379,0,0.603173834469785,13.6105014383038,0,0,5.77325368101093,1.39116485970092,21.720608433627,0,0,0,0.790204397959275,0,0,0,0,7.49870671894216,41.827549921516,13.8939595297539,2.95543124919399,6.39394664730716,3.4504441124869,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0,19.5200290794244,0,2.535908257668,4.78688609852767,5.2003718455683,4.11531798819427,4.25547396069835,7.19339883343468,0.857867961948885,1.62786481617433,0.823240336780769,1.30294473717494,0.710783897485092,1.58390374586686,1.80863626235752,9.58686804460323,0.599837947092342,0,0,0,12.9397421965455,0,12.8373214536647,19.9798203201259,12.7395319981238,23.0988642579465,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,21.4710110508495,22.0075029266258,17.9034915641825,23.2927364914504,44.2503892216961,35.7984482127032,19.7968991337685,21.367173080668,9.09630016223939,5.17365356462525,27.8974751384883,17.8838093485452,45.7007812102116,0,0,0,0,0,0.606255142892519,1.66435439510497,0.907170879989041,20.8410558567773,74.4290570447103,21.3301671769136,4.86928767171664,16.8863392192012,3.86049410744658,2.96836132889982,7.40206530252747,10.1210183428482,28.9087589168608,9.8658341544888,11.1561963321561,0.483437798366489,7.81975234182811,6.44566922551274,8.03701137152247,14.2031111045239,8.91646021724084,0.902399225814824,2.15642943892361,0,0,2.32213583564327,0,0,0.215915916102139,0,1.35473218771926,0,0,0,0,6.79705617602397,4.44440266742331,0,0,0,1.33953315142039,0,0,0.574265537996172,3.90036147621913,16.068392984416,2.90012154876366,1.23238893691716,2.45605879561807,1.37836572484531,12.2459079149832,8.84601832876794,2.38634556765083,6.14321045962488,12.7269384827953,7.49541262723914,17.9933924617364,4.34978457678865,11.1562931831349,127.81381281324,19.5170435644968,3.08033580176089,8.51689648507235,24.358123778102,14.4552890901058,12.5949900332952,2.60510858551767,28.4741482246853,8.00646814480064,1.79128453917934,6.41908482050881,6.68226820644467,3.92474320099615,8.45400550641579,3.0199073270966,4.12343408209902,4.85237955775958,12.6808256938407,2.94880919367287,0.48763373908959,28.0270513075977,5.28250733783777,3.8219975194236,9.33275850894504,13.5609739944291,9.92457618383023,23.8838031086839,39.0221287875849,2.31510213706675,22.3004215695855,16.6386509109417,3.717881977197,0,11.9031422329363,4.02821068153797,13.5534999562875,1.06428319221179,54.043554636202,7.90307743103764,0.75894634753143,0.699869440489966,17.0313139524156,10.7248364085726,3.26672954583968,1.03558180854457,0.86101074534246,5.05414427002877,1.7737206141467,19.0670422171776,0,0,0,0,0,0.648473311192717,0.540031437238115,2.37937552888281,0,0,5.88096518354476,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,9.187403738543,8.61611792633986,0,0,0,1.8714054040822,0.293016358543788,0,5.23783906104148,0,19.5770477484906,3.8605408508243,17.5081600196562,0,0,1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|phase1_expression=10.9007027562334,9.63452357509424,5.07435854745496,10.007329835313,0.446961094427288,4.36169262050184,2.53299878168311,3.79031924056099,0.783556884599516,0.491467873003018,0,0.218441372130172,0.263766978228454,50.8679710665792,29.4943664397845,5.3786011716142,4.21886169616784,5.84248072309899,8.78279037822912,0.738726348460727,0.816002764977012,0.313454721478088,11.4494394852423,6.70684682857133,2.13422487311165,0,0,0,0,0,0,9.19421224478927,8.433765725791,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,27.8308147336116,20.0535164254356,24.9136012612617,13.5198610998687,26.2782829963423,2.45790524626576,2.88248216701333,3.60122621341817,1.76821751921912,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,5.23312862571041,34.291064666977,11.3967460498122,128.436905388822,17.7838704864265,6.02936249737207,10.0921968025615,3.20246987189115,11.1000396787722,2.8008993185979,0.538842688278752,0.163461903113459,1.96764655938411,3.45705554687999,0.468642863667593,4.99456122928513,1.71141546463335,4.03511437489863,1.17434498643765,0.485618833104395,0.561803226808994,31.6438965445085,7.73856199064138,15.9121703010679,43.956105719436,21.5122228472344,0,0,6.56510844420858,3.503318556415,24.1045780471239,24.5827467693269,31.568242967299,33.2026110183579,3.62982986112067,42.874122929638,44.2063794854435,38.1477422087211,106.532339109963,95.8388521917482,58.9996836704491,56.7656411811349,125.569591187502,48.0364435444709,33.8261257487113,54.6776397935258,31.3593350228495,139.163760266513,49.2677760333161,10.5127567232502,15.654129106227,21.0014512854943,15.4874481510062,0,0,0.232387885739037,0.829288440122964,0.252320850875628,0,29.725411142665,18.6539872075937,0,45.043689019102,47.6440457901926,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0.737930631258681,6.51957679134397,7.68251997860379,0,0.603173834469785,13.6105014383038,0,0,5.77325368101093,1.39116485970092,21.720608433627,0,0,0,0.790204397959275,0,0,0,0,7.49870671894216,41.827549921516,13.8939595297539,2.95543124919399,6.39394664730716,3.4504441124869,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0,19.5200290794244,0,2.535908257668,4.78688609852767,5.2003718455683,4.11531798819427,4.25547396069835,7.19339883343468,0.857867961948885,1.62786481617433,0.823240336780769,1.30294473717494,0.710783897485092,1.58390374586686,1.80863626235752,9.58686804460323,0.599837947092342,0,0,0,12.9397421965455,0,12.8373214536647,19.9798203201259,12.7395319981238,23.0988642579465,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,21.4710110508495,22.0075029266258,17.9034915641825,23.2927364914504,44.2503892216961,35.7984482127032,19.7968991337685,21.367173080668,9.09630016223939,5.17365356462525,27.8974751384883,17.8838093485452,45.7007812102116,0,0,0,0,0,0.606255142892519,1.66435439510497,0.907170879989041,20.8410558567773,74.4290570447103,21.3301671769136,4.86928767171664,16.8863392192012,3.86049410744658,2.96836132889982,7.40206530252747,10.1210183428482,28.9087589168608,9.8658341544888,11.1561963321561,0.483437798366489,7.81975234182811,6.44566922551274,8.03701137152247,14.2031111045239,8.91646021724084,0.902399225814824,2.15642943892361,0,0,2.32213583564327,0,0,0.215915916102139,0,1.35473218771926,0,0,0,0,6.79705617602397,4.44440266742331,0,0,0,1.33953315142039,0,0,0.574265537996172,3.90036147621913,16.068392984416,2.90012154876366,1.23238893691716,2.45605879561807,1.37836572484531,12.2459079149832,8.84601832876794,2.38634556765083,6.14321045962488,12.7269384827953,7.49541262723914,17.9933924617364,4.34978457678865,11.1562931831349,127.81381281324,19.5170435644968,3.08033580176089,8.51689648507235,24.358123778102,14.4552890901058,12.5949900332952,2.60510858551767,28.4741482246853,8.00646814480064,1.79128453917934,6.41908482050881,6.68226820644467,3.92474320099615,8.45400550641579,3.0199073270966,4.12343408209902,4.85237955775958,12.6808256938407,2.94880919367287,0.48763373908959,28.0270513075977,5.28250733783777,3.8219975194236,9.33275850894504,13.5609739944291,9.92457618383023,23.8838031086839,39.0221287875849,2.31510213706675,22.3004215695855,16.6386509109417,3.717881977197,0,11.9031422329363,4.02821068153797,13.5534999562875,1.06428319221179,54.043554636202,7.90307743103764,0.75894634753143,0.699869440489966,17.0313139524156,10.7248364085726,3.26672954583968,1.03558180854457,0.86101074534246,5.05414427002877,1.7737206141467,19.0670422171776,0,0,0,0,0,0.648473311192717,0.540031437238115,2.37937552888281,0,0,5.88096518354476,0.185803175125719,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,9.187403738543,8.61611792633986,0,0,0,1.8714054040822,0.293016358543788,0,5.23783906104148,0,19.5770477484906,3.8605408508243,17.5081600196562,0,0,1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| ||
|short_description=p1@GALNT5 | |||
}} | }} |
Latest revision as of 17:01, 17 September 2015
Short description: | p1@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GALNT5_5end |
Coexpression cluster: | C1496_Fibroblast_Smooth_papillotubular_basal_liposarcoma_tenocyte_mesenchymal |
Association with transcript: | -53bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-18 | 76 |
muscle precursor cell | 1.62e-16 | 58 |
myoblast | 1.62e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.62e-16 | 58 |
muscle cell | 6.70e-15 | 55 |
smooth muscle cell | 9.26e-15 | 43 |
smooth muscle myoblast | 9.26e-15 | 43 |
vascular associated smooth muscle cell | 3.17e-13 | 32 |
electrically responsive cell | 8.30e-12 | 61 |
electrically active cell | 8.30e-12 | 61 |
skin fibroblast | 7.88e-11 | 23 |
multi fate stem cell | 6.64e-08 | 427 |
somatic stem cell | 7.61e-08 | 433 |
stem cell | 6.50e-07 | 441 |
preadipocyte | 7.32e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 9.15e-18 | 83 |
surface structure | 1.35e-17 | 99 |
somite | 1.21e-15 | 71 |
presomitic mesoderm | 1.21e-15 | 71 |
presumptive segmental plate | 1.21e-15 | 71 |
dermomyotome | 1.21e-15 | 71 |
trunk paraxial mesoderm | 1.21e-15 | 71 |
dense mesenchyme tissue | 1.38e-15 | 73 |
skeletal muscle tissue | 1.58e-15 | 62 |
striated muscle tissue | 1.58e-15 | 62 |
myotome | 1.58e-15 | 62 |
paraxial mesoderm | 3.80e-15 | 72 |
presumptive paraxial mesoderm | 3.80e-15 | 72 |
muscle tissue | 5.40e-15 | 64 |
musculature | 5.40e-15 | 64 |
musculature of body | 5.40e-15 | 64 |
epithelial vesicle | 5.93e-13 | 78 |
integument | 1.16e-09 | 46 |
integumental system | 1.16e-09 | 46 |
subdivision of skeletal system | 4.01e-09 | 16 |
skin of body | 4.19e-09 | 41 |
mouth | 4.58e-09 | 29 |
stomodeum | 4.58e-09 | 29 |
systemic artery | 1.50e-08 | 33 |
systemic arterial system | 1.50e-08 | 33 |
artery | 2.50e-08 | 42 |
arterial blood vessel | 2.50e-08 | 42 |
arterial system | 2.50e-08 | 42 |
trunk mesenchyme | 1.09e-07 | 122 |
axial skeletal system | 1.17e-07 | 14 |
head | 5.38e-07 | 56 |