FFCP PHASE1:Mm9::chrX:83115560..83115590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71398 | |EntrezGene=71398 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |MCL_coexpression_id=165 | ||
|TSSclassifier=NA | |||
|UniProt=Q08EG0,Q9D3J9 | |UniProt=Q08EG0,Q9D3J9 | ||
|association_with_transcript=-21bp_to_NM_001163539,uc009tsa.2_5end | |association_with_transcript=-21bp_to_NM_001163539,uc009tsa.2_5end | ||
|cluster_id=chrX:83115560..83115590,+ | |||
|description=CAGE_peak_2_at_5430427O19Rik_5end | |description=CAGE_peak_2_at_5430427O19Rik_5end | ||
|id=chrX:83115560..83115590,+ | |id=chrX:83115560..83115590,+ | ||
|ontology_enrichment_celltype=CL:0000049!1.26e-07!19 | |ontology_enrichment_celltype=CL:0000049!1.26e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.38e-19,19;CL:0000988,2.08e-17,32;CL:0002032,2.08e-17,32;CL:0000037,2.08e-17,32;CL:0000837,2.08e-17,32;CL:0000763,4.70e-14,16;CL:0002320,1.38e-13,46;CL:0000134,1.38e-13,46;CL:0000553,2.57e-12,6;CL:0000556,2.57e-12,6;CL:0000219,7.76e-11,54;CL:0002031,8.24e-10,25;CL:0000839,1.63e-09,13;CL:0000034,9.51e-09,97;CL:0000050,6.02e-08,9;CL:0000557,1.38e-07,7;CL:0000723,6.49e-07,91;CL:0000048,6.49e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.91e-08,3;DOID:4045,8.91e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.09e-13!48;UBERON:0002390!1.62e-11!45;UBERON:0003061!1.62e-11!45;UBERON:0002405!1.73e-11!70;UBERON:0002371!5.67e-10!16;UBERON:0001474!1.65e-08!22;UBERON:0004765!1.65e-08!22;UBERON:0001434!1.65e-08!22;UBERON:0002204!6.32e-07!32 | |ontology_enrichment_uberon=UBERON:0002193!6.09e-13!48;UBERON:0002390!1.62e-11!45;UBERON:0003061!1.62e-11!45;UBERON:0002405!1.73e-11!70;UBERON:0002371!5.67e-10!16;UBERON:0001474!1.65e-08!22;UBERON:0004765!1.65e-08!22;UBERON:0001434!1.65e-08!22;UBERON:0002204!6.32e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-19,16;UBERON:0002193,3.16e-15,48;UBERON:0002405,3.16e-15,48;UBERON:0002390,9.11e-15,45;UBERON:0003061,9.11e-15,45;UBERON:0002384,1.38e-13,46;UBERON:0002204,1.53e-13,32;UBERON:0001474,2.12e-13,22;UBERON:0004765,2.12e-13,22;UBERON:0001434,2.12e-13,22;UBERON:0002106,6.09e-08,6;UBERON:0004457,6.09e-08,6;UBERON:0000042,6.09e-08,6;UBERON:0004854,6.09e-08,6;UBERON:0009034,6.09e-08,6;UBERON:0002095,6.09e-08,6;UBERON:0004782,6.09e-08,6;UBERON:0003281,6.09e-08,6;UBERON:0009664,6.09e-08,6;UBERON:0002296,6.09e-08,6;UBERON:0005602,6.09e-08,6;UBERON:0001179,6.09e-08,6;UBERON:0006293,6.09e-08,6 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0,2.6648780945253,2.02475267389826,1.39912375625629,13.249410945046,14.5341299622083,10.1853516431527,0.255129870453209,6.55320277925843,5.74639536105658,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,15.4856703372656,9.37602413428561,17.7998072951091,21.7645650571475,18.442228093878,18.934903768215,0,0,0,0,0,0,0,0,0,6.87908684836719,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,10.3575153458869,0.445326417194474,0,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.433798070759735,0.884610551949874,0.485300549842228,0.883366073841574,0,0,0,0.209446706813455,0,8.2672435909085,4.19931911695385,9.40319680340679,0,0.915001205637253,0,0,0,0,0.162241263067758,0,1.7416975885413,0.505445516867349,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,2.05878325691772,5.68326998791185,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0.671032093801859,0,0,0.660837565967596,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0,0.246794327843601,0.296452627087149,0,0.196558995113203,0.224862112384854,0.608580364165509,0,0.50925170356284,0.287696137450811,1.13494658742525,1.09824565275233,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0,2.03228509183265,0,0,0,0,0,0.238043640886014,0.195133647857799,0.788175720530955,0.8858587585951,0.478364305972461,0.81931657357869,1.20879487306127,0.578596234326046,15.0791283939272,11.4220193601929,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0,0,0.258428293168221,1.09060118843252,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0,0.291480836629851,0,2.73393409276564,0.206386867963223,2.03713980106683,1.50694765603753,1.77702496037333,2.97411625168479,8.83887835968048,7.69732987780119,8.56839837587428,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.404593039154462,0.0826534557253359,0.26175594198403,0,1.24267862617385,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0.948033361884535,1.41907650703115,1.95150818613172,0.77952493786677,0.179026695667481,0.39736270956253,0.480781798079875,1.03382669022204,0.100966449948148,0.457240839929999,0.604957110821043,0.38983152295901,0.673482891482306,0.584384510907845,0.226730383615211,0,0,0,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.182927972872773,0,0,0,0.355905054372522,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.927471342481686 | ||
|short_description=p2@5430427O19Rik | |short_description=p2@5430427O19Rik | ||
}} | }} |
Latest revision as of 00:43, 2 October 2015
Short description: | p2@5430427O19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_5430427O19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | -21bp_to_NM_001163539, uc009tsa.2_5end |
EntrezGene: | 5430427O19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.38e-19 | 19 |
hematopoietic cell | 2.08e-17 | 32 |
hematopoietic oligopotent progenitor cell | 2.08e-17 | 32 |
hematopoietic stem cell | 2.08e-17 | 32 |
hematopoietic multipotent progenitor cell | 2.08e-17 | 32 |
myeloid cell | 4.70e-14 | 16 |
connective tissue cell | 1.38e-13 | 46 |
mesenchymal cell | 1.38e-13 | 46 |
megakaryocyte progenitor cell | 2.57e-12 | 6 |
megakaryocyte | 2.57e-12 | 6 |
motile cell | 7.76e-11 | 54 |
hematopoietic lineage restricted progenitor cell | 8.24e-10 | 25 |
myeloid lineage restricted progenitor cell | 1.63e-09 | 13 |
stem cell | 9.51e-09 | 97 |
megakaryocyte-erythroid progenitor cell | 6.02e-08 | 9 |
granulocyte monocyte progenitor cell | 1.38e-07 | 7 |
somatic stem cell | 6.49e-07 | 91 |
multi fate stem cell | 6.49e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-19 | 16 |
hemolymphoid system | 3.16e-15 | 48 |
immune system | 3.16e-15 | 48 |
hematopoietic system | 9.11e-15 | 45 |
blood island | 9.11e-15 | 45 |
connective tissue | 1.38e-13 | 46 |
musculoskeletal system | 1.53e-13 | 32 |
bone element | 2.12e-13 | 22 |
skeletal element | 2.12e-13 | 22 |
skeletal system | 2.12e-13 | 22 |
spleen | 6.09e-08 | 6 |
cavity lining | 6.09e-08 | 6 |
serous membrane | 6.09e-08 | 6 |
gastrointestinal system mesentery | 6.09e-08 | 6 |
stomach region | 6.09e-08 | 6 |
mesentery | 6.09e-08 | 6 |
gastrointestinal system serosa | 6.09e-08 | 6 |
mesentery of stomach | 6.09e-08 | 6 |
gut mesentery | 6.09e-08 | 6 |
dorsal mesentery | 6.09e-08 | 6 |
dorsal mesogastrium | 6.09e-08 | 6 |
peritoneal cavity | 6.09e-08 | 6 |
spleen primordium | 6.09e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.91e-08 | 3 |
muscle cancer | 8.91e-08 | 3 |