FFCP PHASE1:Mm9::chr13:99383382..99383414,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=636 | |MCL_coexpression_id=636 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:99383382..99383414,+ | |||
|description=CAGE_peak_at_chr13:99383382..99383414,+ | |description=CAGE_peak_at_chr13:99383382..99383414,+ | ||
|id=chr13:99383382..99383414,+ | |id=chr13:99383382..99383414,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.91e-49!50;CL:0002319!5.63e-42!43;CL:0000221!9.85e-41!44;CL:0000133!9.85e-41!44;CL:0002321!1.13e-39!70;CL:0000220!1.13e-39!70;CL:0000393!4.44e-36!39;CL:0000211!4.44e-36!39;CL:0000548!7.63e-33!115;CL:0000004!7.63e-33!115;CL:0000255!7.63e-33!115;CL:0002371!1.41e-31!118;CL:0000144!2.25e-30!121;CL:0000012!2.25e-30!121;CL:0000540!2.71e-28!33;CL:0000047!2.71e-28!33;CL:0000031!2.71e-28!33;CL:0000404!2.71e-28!33;CL:0000723!4.48e-23!91;CL:0000048!4.48e-23!91;CL:0000034!5.73e-22!97;CL:0000117!6.84e-17!23;CL:0000337!6.84e-17!23;CL:0000333!3.64e-14!10;CL:0000095!3.64e-14!10;CL:0000243!3.64e-14!10;CL:0000123!3.64e-14!10;CL:0000125!3.64e-14!10;CL:0000030!3.64e-14!10;CL:0000339!3.64e-14!10;CL:0002453!3.35e-12!8;CL:0000107!6.11e-12!9;CL:0000128!1.64e-09!6;CL:0000126!1.64e-09!6;CL:0000127!1.64e-09!6;CL:0000680!9.07e-09!6;CL:0000183!9.07e-09!6;CL:0000187!9.07e-09!6;CL:0000056!9.07e-09!6;CL:0000222!2.39e-07!7 | |ontology_enrichment_celltype=CL:0000055!4.91e-49!50;CL:0002319!5.63e-42!43;CL:0000221!9.85e-41!44;CL:0000133!9.85e-41!44;CL:0002321!1.13e-39!70;CL:0000220!1.13e-39!70;CL:0000393!4.44e-36!39;CL:0000211!4.44e-36!39;CL:0000548!7.63e-33!115;CL:0000004!7.63e-33!115;CL:0000255!7.63e-33!115;CL:0002371!1.41e-31!118;CL:0000144!2.25e-30!121;CL:0000012!2.25e-30!121;CL:0000540!2.71e-28!33;CL:0000047!2.71e-28!33;CL:0000031!2.71e-28!33;CL:0000404!2.71e-28!33;CL:0000723!4.48e-23!91;CL:0000048!4.48e-23!91;CL:0000034!5.73e-22!97;CL:0000117!6.84e-17!23;CL:0000337!6.84e-17!23;CL:0000333!3.64e-14!10;CL:0000095!3.64e-14!10;CL:0000243!3.64e-14!10;CL:0000123!3.64e-14!10;CL:0000125!3.64e-14!10;CL:0000030!3.64e-14!10;CL:0000339!3.64e-14!10;CL:0002453!3.35e-12!8;CL:0000107!6.11e-12!9;CL:0000128!1.64e-09!6;CL:0000126!1.64e-09!6;CL:0000127!1.64e-09!6;CL:0000680!9.07e-09!6;CL:0000183!9.07e-09!6;CL:0000187!9.07e-09!6;CL:0000056!9.07e-09!6;CL:0000222!2.39e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.89e-42,43;CL:0000221,8.65e-41,44;CL:0000133,8.65e-41,44;CL:0002321,1.14e-39,70;CL:0000393,7.88e-35,39;CL:0000211,7.88e-35,39;CL:0000540,1.66e-25,33;CL:0000047,1.66e-25,33;CL:0000031,1.66e-25,33;CL:0000404,1.66e-25,33;CL:0000723,3.12e-21,91;CL:0000048,3.12e-21,91;CL:0000034,1.56e-20,97;CL:0000333,7.63e-18,10;CL:0000095,7.63e-18,10;CL:0000243,7.63e-18,10;CL:0000123,7.63e-18,10;CL:0000125,7.63e-18,10;CL:0000030,7.63e-18,10;CL:0000339,7.63e-18,10;CL:0002453,2.64e-15,8;CL:0000107,5.72e-15,9;CL:0000117,6.06e-14,23;CL:0000337,6.06e-14,23;CL:0000128,7.82e-12,6;CL:0000126,7.82e-12,6;CL:0000127,7.82e-12,6;CL:0000680,7.13e-11,6;CL:0000187,7.13e-11,6;CL:0000056,7.13e-11,6;CL:0000222,3.46e-09,7;CL:0000355,6.09e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.67e-19!75;UBERON:0001016!8.67e-19!75;UBERON:0001017!4.16e-17!73;UBERON:0005743!4.16e-17!73;UBERON:0000010!6.13e-14!11;UBERON:0002410!6.11e-12!9;UBERON:0004121!9.24e-11!102;UBERON:0000924!9.24e-11!102;UBERON:0006601!9.24e-11!102;UBERON:0002020!5.16e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!8.67e-19!75;UBERON:0001016!8.67e-19!75;UBERON:0001017!4.16e-17!73;UBERON:0005743!4.16e-17!73;UBERON:0000010!6.13e-14!11;UBERON:0002410!6.11e-12!9;UBERON:0004121!9.24e-11!102;UBERON:0000924!9.24e-11!102;UBERON:0006601!9.24e-11!102;UBERON:0002020!5.16e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.36e-20,75;UBERON:0001017,4.52e-18,73;UBERON:0000010,1.50e-17,11;UBERON:0002410,5.72e-15,9;UBERON:0004121,6.00e-14,95;UBERON:0000924,6.00e-14,95;UBERON:0006601,6.00e-14,95;UBERON:0001134,6.09e-07,9;UBERON:0002036,6.09e-07,9;UBERON:0002385,6.09e-07,9;UBERON:0000486,6.09e-07,9;UBERON:0007503,6.09e-07,9;UBERON:0001015,6.09e-07,9;UBERON:0002329,6.09e-07,9;UBERON:0003082,6.09e-07,9;UBERON:0003059,6.09e-07,9;UBERON:0007282,6.09e-07,9;UBERON:0004290,6.09e-07,9;UBERON:0009618,6.09e-07,9 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,1.17032263160997,0,0.319088635981346,0,0.262261207256992,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,4.40512205188036,2.34717403304412,9.15705656797875,10.1055644057857,9.72149495371417,4.61955191363696,4.31257693094915,0,0,0,7.46052364504246,2.86533439938757,8.25075347643908,1.21389876515759,1.5869729378161,0,2.71075625655306,0.889294796111139,0,0,0,4.19440154725767,9.22123932771731,2.28117147078651,4.05017814995072,2.94454945891935,0.856952953211411,2.20868540951614,0.979926393719632,3.45043695665651,0,2.20231761998777,0.893811366596314,1.22885226604995,1.58263545276233,1.64677758484337,2.08365348222704,1.95428099300967,0,1.68078072554491,2.06240009831567,2.27794689278565,0.745597783301202,3.25622631332691,1.28471652181535,0,0,2.719885334831,1.61910957491345,0,0,1.68533304158102,4.4311883870295,6.49465011507172,4.59341446863442,0,6.41632387071589,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78689407140348,0,2.2085575359138,4.68526493155966,3.66219776145758,1.91175038362042,3.56477878531831,2.83076530788832,3.23848561339915,4.09158201075837,3.55759000151871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77588762699252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,1.17032263160997,0,0.319088635981346,0,0.262261207256992,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,4.40512205188036,2.34717403304412,9.15705656797875,10.1055644057857,9.72149495371417,4.61955191363696,4.31257693094915,0,0,0,7.46052364504246,2.86533439938757,8.25075347643908,1.21389876515759,1.5869729378161,0,2.71075625655306,0.889294796111139,0,0,0,4.19440154725767,9.22123932771731,2.28117147078651,4.05017814995072,2.94454945891935,0.856952953211411,2.20868540951614,0.979926393719632,3.45043695665651,0,2.20231761998777,0.893811366596314,1.22885226604995,1.58263545276233,1.64677758484337,2.08365348222704,1.95428099300967,0,1.68078072554491,2.06240009831567,2.27794689278565,0.745597783301202,3.25622631332691,1.28471652181535,0,0,2.719885334831,1.61910957491345,0,0,1.68533304158102,4.4311883870295,6.49465011507172,4.59341446863442,0,6.41632387071589,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78689407140348,0,2.2085575359138,4.68526493155966,3.66219776145758,1.91175038362042,3.56477878531831,2.83076530788832,3.23848561339915,4.09158201075837,3.55759000151871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77588762699252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:99383382..99383414,+ | |short_description=p@chr13:99383382..99383414,+ | ||
}} | }} |
Latest revision as of 21:08, 3 August 2015
Short description: | p@chr13:99383382..99383414, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:99383382..99383414, + |
Coexpression cluster: | MCL_coexpression_mm9:636 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.89e-42 | 43 |
ectodermal cell | 8.65e-41 | 44 |
neurectodermal cell | 8.65e-41 | 44 |
embryonic cell | 1.14e-39 | 70 |
electrically responsive cell | 7.88e-35 | 39 |
electrically active cell | 7.88e-35 | 39 |
neuron | 1.66e-25 | 33 |
neuronal stem cell | 1.66e-25 | 33 |
neuroblast | 1.66e-25 | 33 |
electrically signaling cell | 1.66e-25 | 33 |
somatic stem cell | 3.12e-21 | 91 |
multi fate stem cell | 3.12e-21 | 91 |
stem cell | 1.56e-20 | 97 |
migratory neural crest cell | 7.63e-18 | 10 |
neuron associated cell | 7.63e-18 | 10 |
glial cell (sensu Vertebrata) | 7.63e-18 | 10 |
neuron associated cell (sensu Vertebrata) | 7.63e-18 | 10 |
glial cell | 7.63e-18 | 10 |
glioblast | 7.63e-18 | 10 |
glioblast (sensu Vertebrata) | 7.63e-18 | 10 |
oligodendrocyte precursor cell | 2.64e-15 | 8 |
autonomic neuron | 5.72e-15 | 9 |
CNS neuron (sensu Vertebrata) | 6.06e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.06e-14 | 23 |
oligodendrocyte | 7.82e-12 | 6 |
macroglial cell | 7.82e-12 | 6 |
astrocyte | 7.82e-12 | 6 |
muscle precursor cell | 7.13e-11 | 6 |
muscle cell | 7.13e-11 | 6 |
myoblast | 7.13e-11 | 6 |
mesodermal cell | 3.46e-09 | 7 |
multi-potent skeletal muscle stem cell | 6.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.36e-20 | 75 |
central nervous system | 4.52e-18 | 73 |
peripheral nervous system | 1.50e-17 | 11 |
autonomic nervous system | 5.72e-15 | 9 |
ectoderm-derived structure | 6.00e-14 | 95 |
ectoderm | 6.00e-14 | 95 |
presumptive ectoderm | 6.00e-14 | 95 |
skeletal muscle tissue | 6.09e-07 | 9 |
striated muscle tissue | 6.09e-07 | 9 |
muscle tissue | 6.09e-07 | 9 |
multilaminar epithelium | 6.09e-07 | 9 |
epithelial vesicle | 6.09e-07 | 9 |
musculature | 6.09e-07 | 9 |
somite | 6.09e-07 | 9 |
myotome | 6.09e-07 | 9 |
presomitic mesoderm | 6.09e-07 | 9 |
presumptive segmental plate | 6.09e-07 | 9 |
dermomyotome | 6.09e-07 | 9 |
trunk paraxial mesoderm | 6.09e-07 | 9 |