FFCP PHASE1:Hg19::chr2:28113471..28113493,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:28113471..28113493,-
|short_description=p2@RBKS
|description=CAGE_peak_2_at_RBKS_5end
|association_with_transcript=54bp_to_ENST00000453412_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64080 | |EntrezGene=64080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30325 | |HGNC=30325 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBU0 | |UniProt=E9PBU0 | ||
|association_with_transcript=54bp_to_ENST00000453412_5end | |||
|cluster_id=chr2:28113471..28113493,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_RBKS_5end | |||
|id=chr2:28113471..28113493,- | |||
|ontology_enrichment_celltype=CL:0002057!2.20e-27!42;CL:0000860!1.98e-25!45;CL:0000738!5.42e-20!140;CL:0000766!5.88e-19!76;CL:0000037!6.08e-17!172;CL:0000566!6.08e-17!172;CL:0002087!3.64e-16!119;CL:0000988!4.08e-16!182;CL:0002031!1.28e-14!124;CL:0002032!1.99e-14!165;CL:0000837!1.99e-14!165;CL:0000839!6.16e-14!70;CL:0000557!7.66e-14!71;CL:0002194!1.79e-13!63;CL:0000576!1.79e-13!63;CL:0000040!1.79e-13!63;CL:0000559!1.79e-13!63;CL:0002009!2.13e-12!65;CL:0000763!9.56e-12!112;CL:0000049!9.56e-12!112;CL:0002393!2.94e-07!9;CL:0002397!2.94e-07!9;CL:0000094!8.78e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.83e-40;33!CL:0002057;7.83e-40;33!CL:0000576;6.63e-31;48!CL:0000473;2.64e-27;39!CL:0000234;2.64e-27;39!CL:0000766;5.17e-25;69!CL:0002087;5.64e-15;104!CL:0000763;1.87e-13;100!CL:0000094;3.25e-12;8!CL:0002393;2.79e-11;6!CL:0002397;2.79e-11;6!CL:0000738;1.04e-10;136!CL:0000624;2.75e-10;6!CL:0000081;1.73e-08;11!CL:0000988;1.23e-07;177!CL:0000775;3.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.73e-60,42;CL:0002057,4.73e-60,42;CL:0000473,6.66e-51,48;CL:0000234,6.66e-51,48;CL:0000766,3.01e-50,72;CL:0000738,2.34e-48,136;CL:0000037,1.16e-43,168;CL:0000988,2.34e-40,177;CL:0000557,1.19e-39,67;CL:0002087,1.28e-39,115;CL:0002032,5.11e-39,161;CL:0000837,5.11e-39,161;CL:0000839,1.84e-38,66;CL:0002194,3.86e-38,59;CL:0000576,3.86e-38,59;CL:0000040,3.86e-38,59;CL:0000559,3.86e-38,59;CL:0002031,9.48e-37,120;CL:0002009,1.69e-36,61;CL:0000763,4.20e-36,108;CL:0000049,4.20e-36,108;CL:0002393,5.51e-16,9;CL:0002397,5.51e-16,9;CL:0000134,7.90e-15,354;CL:0002320,3.94e-14,361;CL:0000219,2.82e-12,386;CL:0000094,4.52e-12,8;CL:0000624,1.77e-10,6;CL:0000048,2.95e-09,427;CL:0000723,7.49e-09,433;CL:0000081,2.18e-08,11;CL:0000034,2.47e-08,441;CL:0000775,3.10e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-42;42!CL:0000049;3.34e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.70e-13!102;UBERON:0003061!9.70e-13!102;UBERON:0002371!2.95e-12!80;UBERON:0002193!4.62e-12!112;UBERON:0001474!3.41e-11!86;UBERON:0004765!3.45e-10!101;UBERON:0001434!3.45e-10!101;UBERON:0002204!5.29e-07!167;UBERON:0002405!5.98e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.14e-35,76;UBERON:0002390,1.87e-33,98;UBERON:0003061,1.87e-33,98;UBERON:0001474,1.43e-31,82;UBERON:0002193,5.56e-29,108;UBERON:0002405,8.34e-28,93;UBERON:0004765,1.35e-27,90;UBERON:0001434,1.55e-23,100;UBERON:0002384,9.47e-14,371;UBERON:0003081,8.13e-13,203;UBERON:0002204,6.57e-10,167 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0,2.61701557230111,0,0,0,0.245733936501509,2.79120467188971,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0.816002764977012,0,0,0.273748850145768,0.251085279189606,0,0.246301768349837,0.0787107813136792,6.29382842958246,0.767658796194425,1.08371286321253,0,0,0.369754010166788,0.387336002901508,0,1.17440175733939,3.32397245119126,4.41197784434312,4.99125002646459,0,0,0.257575567634187,1.30858414901608,0,0.727752183563449,6.27558399645349,7.40102198439286,10.5300166104335,5.17846306179871,3.84241059793651,4.25668013799453,15.1688099524112,8.39130088658974,8.12558919566051,4.89430082810772,2.72906150057846,3.59557575112135,12.8555234795779,9.62787081228281,12.7867425159808,1.9791078011203,0.997318288108159,0.852449501065388,8.41606792022894,6.80862269629368,3.73693349397345,8.03995728821578,7.82224377630302,6.95004303056373,3.02699751316684,4.41933163185078,3.16462387440884,1.90129757680748,3.18906449947565,3.56419697364239,6.29040334420373,3.30389164251314,3.2145117339416,1.99508920618874,2.58591680358817,2.55729815270488,1.75996244461323,0,0,0,1.20118796110804,0,0,0.954053754535364,1.1384259382189,2.93618594685469,1.52909291250092,0,0.560508562981536,0.263384084775077,1.96709770113833,1.17903228824749,1.43921049299656,0.501559486172034,6.8443675993054,6.62826928028627,5.84480185223734,1.00269411196656,2.94605907474837,3.1014745241707,3.24964636518019,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0,2.07601188426885,0.267540828089713,4.18142095219907,0,2.29932296161153,1.03088233644789,2.53019692019503,0.95569624297229,0,0,0.451725357233318,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,1.00803371612366,1.60464117470104,0.434473211648397,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0.458426764241994,0.364295288292542,0.741568885568859,0,0,0,0,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,23.7204751384914,54.2892369807656,0.436094052142534,0,0,0.926864265692532,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.490385709340376,0,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,0,0.421352420106746,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,0.612975591598039,0.45071417671979,0.113432183160021,0.89694817844431,0,1.27159140695737,1.50045548042201,0.412210116953756,2.06112432036503,0.558350568994769,0.337552664482532,0.292311015483596,0.504867548488229,0.460249493211497,0.161646056818812,1.42003837006646,0.403008392910561,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.949082476444386,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0.503946384596579,0.567100388969546,0.268675568108545,0,0,0,0.528290604079356,1.03664057770386,1.15295962733569,1.8936365013957,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,0,0,0,0,0,1.08524321078289,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.358121926479791,0,1.18218456121156,1.2937654491571,1.54011643535698,0,0,0,0,0,4.49404214368309,11.966458368161,14.5045429702612,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.86091223510599,5.82428342210265,2.881644060693,0.303127571446259,0,0.604780586659361,0.496215615637554,0.306923946576125,0.280660094433074,0.512556597022804,0,0,0,0,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0.184161977871793,0,0,0,0.902399225814824,0.0770153371044148,3.13739907670742,1.46139224653261,0.527758144464379,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0.501689773854853,2.03901018436031,0.831076008928724,2.23874754722178,0.219259876645935,0,0,0,0.650756789328606,0.515205058238611,0.732555718546747,0.82509499920588,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.644521469209642,0.145016693914229,0.170453254832202,0.178064071293475,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0.318203247925937,0.78494864019923,0.539617372749944,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,1.21856744815642,0,0.272999822815972,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0,0.987884678879706,0,0,0,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,1.33029046061003,0,1.52234282769651,0.764637207142375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| ||
|short_description=p2@RBKS | |||
}} | }} |
Latest revision as of 18:33, 16 September 2015
Short description: | p2@RBKS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBKS_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 54bp_to_ENST00000453412_5end |
EntrezGene: | RBKS |
HGNC: | 30325 |
UniProt: | E9PBU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.14e-35 | 76 |
hematopoietic system | 1.87e-33 | 98 |
blood island | 1.87e-33 | 98 |
bone element | 1.43e-31 | 82 |
hemolymphoid system | 5.56e-29 | 108 |
immune system | 8.34e-28 | 93 |
skeletal element | 1.35e-27 | 90 |
skeletal system | 1.55e-23 | 100 |
connective tissue | 9.47e-14 | 371 |
lateral plate mesoderm | 8.13e-13 | 203 |
musculoskeletal system | 6.57e-10 | 167 |